RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 FBXO33Q7Z6M2 555 aa4.15□□□□□ -1.74
PMS1-215ENST00000447232 CCAR1Q8IX12 1150 aaKnown RBP4.15□□□□□ -1.74
PMS1-215ENST00000447232 ADSSL1Q8N142 457 aa4.15□□□□□ -1.74
PMS1-215ENST00000447232 ARNTL2Q8WYA1 636 aa4.15□□□□□ -1.74
PMS1-215ENST00000447232 ABHD17AQ96GS6 310 aa4.15□□□□□ -1.74
PMS1-215ENST00000447232 IDI2Q9BXS1 227 aa4.15□□□□□ -1.74
PMS1-215ENST00000447232 DNAAF2Q9NVR5 837 aaKnown RBP4.15□□□□□ -1.74
PMS1-215ENST00000447232 COG6Q9Y2V7 657 aa4.15□□□□□ -1.74
PMS1-215ENST00000447232 PCDHGA11Q9Y5H2 935 aa4.15□□□□□ -1.74
PMS1-215ENST00000447232 CEP250Q9BV73 2442 aa4.15□□□□□ -1.74
PMS1-215ENST00000447232 MROH7Q68CQ1 1323 aa4.15□□□□□ -1.75
PMS1-215ENST00000447232 KRTAP4-8A0A0G2JLE6 195 aa4.15□□□□□ -1.75
PMS1-215ENST00000447232 ANKRD18BA2A2Z9 1011 aa4.15□□□□□ -1.75
PMS1-215ENST00000447232 DDTLA6NHG4 134 aaPredicted RBP4.15□□□□□ -1.75
PMS1-215ENST00000447232 H0Y858 1186 aa4.15□□□□□ -1.75
PMS1-215ENST00000447232 ADAMTS4O75173 837 aa4.15□□□□□ -1.75
PMS1-215ENST00000447232 ENTPD3O75355 529 aa4.15□□□□□ -1.75
PMS1-215ENST00000447232 ITGB2P05107 769 aa4.15□□□□□ -1.75
PMS1-215ENST00000447232 HSPA5P11021 654 aaKnown RBP4.15□□□□□ -1.75
PMS1-215ENST00000447232 ATP4AP20648 1035 aa4.15□□□□□ -1.75
PMS1-215ENST00000447232 PLA2G4AP47712 749 aa4.15□□□□□ -1.75
PMS1-215ENST00000447232 CTBSQ01459 385 aa4.15□□□□□ -1.75
PMS1-215ENST00000447232 UBE3BQ7Z3V4 1068 aa4.15□□□□□ -1.75
PMS1-215ENST00000447232 SPRED2Q7Z698 418 aa4.15□□□□□ -1.75
PMS1-215ENST00000447232 RNF180Q86T96 592 aa4.15□□□□□ -1.75
PMS1-215ENST00000447232 PPP1R12CQ9BZL4 782 aa4.15□□□□□ -1.75
PMS1-215ENST00000447232 OSBPL5Q9H0X9 879 aaPredicted RBP4.15□□□□□ -1.75
PMS1-215ENST00000447232 XPNPEP3Q9NQH7 507 aa4.15□□□□□ -1.75
PMS1-215ENST00000447232 STARD7Q9NQZ5 370 aa4.15□□□□□ -1.75
PMS1-215ENST00000447232 TLR9Q9NR96 1032 aa4.15□□□□□ -1.75
PMS1-215ENST00000447232 EP300Q09472 2414 aaPredicted RBP4.15□□□□□ -1.75
PMS1-215ENST00000447232 PGK1P00558 417 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 NEFMP07197 916 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 AVPR2P30518 371 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 CYP2C18P33260 490 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 ACLYP53396 1101 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 CHAF1AQ13111 956 aaPredicted RBP4.14□□□□□ -1.75
PMS1-215ENST00000447232 PUM1Q14671 1186 aaKnown RBP eCLIP4.14□□□□□ -1.75
PMS1-215ENST00000447232 PRAMEF19Q5SWL8 479 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 CCSAPQ6IQ19 270 aaPredicted RBP4.14□□□□□ -1.75
PMS1-215ENST00000447232 TBC1D9Q6ZT07 1266 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 FAM126BQ8IXS8 530 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 PAGR1Q9BTK6 254 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 WDR18Q9BV38 432 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 NIFKQ9BYG3 293 aaKnown RBP4.14□□□□□ -1.75
PMS1-215ENST00000447232 ALG2Q9H553 416 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 SERTAD1Q9UHV2 236 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 GDF2Q9UK05 429 aaPredicted RBP4.14□□□□□ -1.75
PMS1-215ENST00000447232 HCN2Q9UL51 889 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 IQSEC3Q9UPP2 1182 aaPredicted RBP4.14□□□□□ -1.75
PMS1-215ENST00000447232 RABGAP1Q9Y3P9 1069 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 ELP1O95163 1332 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 NEURL1BA8MQ27 555 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 USP17L5A8MUK1 530 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 CDK2AP1O14519 115 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 CD4P01730 458 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 RARBP10826 455 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 RGS3P49796 1198 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 BACE1P56817 501 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 CCNA1P78396 465 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 COL19A1Q14993 1142 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 CWF19L2Q2TBE0 894 aaKnown RBP4.14□□□□□ -1.75
PMS1-215ENST00000447232 PLA2G4EQ3MJ16 856 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 C1orf216Q8TAB5 229 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 NUP133Q8WUM0 1156 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 EDARADDQ8WWZ3 215 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 ZCCHC2Q9C0B9 1178 aaKnown RBP4.14□□□□□ -1.75
PMS1-215ENST00000447232 DLL3Q9NYJ7 618 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 NRBP1Q9UHY1 535 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 MAP3K2Q9Y2U5 619 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 MAST4O15021 2626 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 FLNBO75369 2602 aaKnown RBP4.14□□□□□ -1.75
PMS1-215ENST00000447232 UMODL1Q5DID0 1318 aa4.14□□□□□ -1.75
PMS1-215ENST00000447232 A6NJY4 79 aa4.13□□□□□ -1.75
PMS1-215ENST00000447232 FGFR3P22607 806 aa4.13□□□□□ -1.75
PMS1-215ENST00000447232 GCKRQ14397 625 aa4.13□□□□□ -1.75
PMS1-215ENST00000447232 RRP1BQ14684 758 aaKnown RBP4.13□□□□□ -1.75
PMS1-215ENST00000447232 DUSP27Q5VZP5 1158 aa4.13□□□□□ -1.75
PMS1-215ENST00000447232 KLHDC9Q8NEP7 349 aa4.13□□□□□ -1.75
PMS1-215ENST00000447232 GDPD5Q8WTR4 605 aa4.13□□□□□ -1.75
PMS1-215ENST00000447232 NKD2Q969F2 451 aaPredicted RBP4.13□□□□□ -1.75
PMS1-215ENST00000447232 USP40Q9NVE5 1235 aa4.13□□□□□ -1.75
PMS1-215ENST00000447232 PCDHGC4Q9Y5F7 938 aa4.13□□□□□ -1.75
PMS1-215ENST00000447232 USP3Q9Y6I4 520 aa4.13□□□□□ -1.75
PMS1-215ENST00000447232 SPTBN2O15020 2390 aa4.13□□□□□ -1.75
PMS1-215ENST00000447232 H3BQ06 376 aaPredicted RBP4.13□□□□□ -1.75
PMS1-215ENST00000447232 PLIN1O60240 522 aa4.13□□□□□ -1.75
PMS1-215ENST00000447232 COBLO75128 1261 aa4.13□□□□□ -1.75
PMS1-215ENST00000447232 BMP4P12644 408 aa4.13□□□□□ -1.75
PMS1-215ENST00000447232 HOXB4P17483 251 aaPredicted RBP4.13□□□□□ -1.75
PMS1-215ENST00000447232 ADORA2AP29274 412 aa4.13□□□□□ -1.75
PMS1-215ENST00000447232 CAP2P40123 477 aa4.13□□□□□ -1.75
PMS1-215ENST00000447232 IFIT5Q13325 482 aaKnown RBP4.13□□□□□ -1.75
PMS1-215ENST00000447232 FIGNL1Q6PIW4 674 aa4.13□□□□□ -1.75
PMS1-215ENST00000447232 LBX2Q6XYB7 198 aa4.13□□□□□ -1.75
PMS1-215ENST00000447232 NLRP8Q86W28 1048 aa4.13□□□□□ -1.75
PMS1-215ENST00000447232 GOLGA6L1Q8N7Z2 621 aa4.13□□□□□ -1.75
PMS1-215ENST00000447232 PHOSPHO2Q8TCD6 241 aa4.13□□□□□ -1.75
PMS1-215ENST00000447232 ASIC4Q96FT7 647 aa4.13□□□□□ -1.75
PMS1-215ENST00000447232 POM121Q96HA1 1249 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms