RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 CHMP5Q9NZZ3 219 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 CNPY2Q9Y2B0 182 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 CLIC4Q9Y696 253 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 IVNS1ABPQ9Y6Y0 642 aa8.64□□□□□ -1.03
SF3A3P1-201ENST00000446317 THSD7BQ9C0I4 1608 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 RBAK-RBAKDNI3L0D1 243 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 M0R2N6 131 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 DDX39AO00148 427 aaKnown RBP8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 ATP2A1O14983 1001 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 BRD1O95696 1058 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 SLC25A27O95847 323 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 ALDH1A1P00352 501 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 HSPA1AP0DMV8 641 aaKnown RBP8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 HSPA1BP0DMV9 641 aaKnown RBP8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 ELNP15502 786 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 PDCP20941 246 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 PTPREP23469 700 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 GNA11P29992 359 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 ZNF76P36508 570 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 CLK2P49760 499 aaKnown RBP8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 TOB1P50616 345 aaPredicted RBP8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 HSD17B4P51659 736 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 SP4Q02446 784 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 NONOQ15233 471 aaKnown RBP eCLIP8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 ANO1Q5XXA6 986 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 PPP1R18Q6NYC8 613 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 MCF2L2Q86YR7 1114 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 NOSTRINQ8IVI9 506 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 FBXO16Q8IX29 292 aaPredicted RBP8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 CHST13Q8NET6 341 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 TNPO1Q92973 898 aaKnown RBP8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 LENG1Q96BZ8 264 aaPredicted RBP8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 FGD4Q96M96 766 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 MROH8Q9H579 483 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 PXMP2Q9NR77 195 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 PCDHB6Q9Y5E3 794 aa8.63□□□□□ -1.03
SF3A3P1-201ENST00000446317 TULP1O00294 542 aaPredicted RBP8.62□□□□□ -1.03
SF3A3P1-201ENST00000446317 FIBPO43427 364 aa8.62□□□□□ -1.03
SF3A3P1-201ENST00000446317 SLC37A4O43826 429 aa8.62□□□□□ -1.03
SF3A3P1-201ENST00000446317 EDIL3O43854 480 aa8.62□□□□□ -1.03
SF3A3P1-201ENST00000446317 CCNT1O60563 726 aaKnown RBP8.62□□□□□ -1.03
SF3A3P1-201ENST00000446317 FDX1P10109 184 aa8.62□□□□□ -1.03
SF3A3P1-201ENST00000446317 CYP2C19P33261 490 aa8.62□□□□□ -1.03
SF3A3P1-201ENST00000446317 LBX1P52954 281 aa8.62□□□□□ -1.03
SF3A3P1-201ENST00000446317 FCGRTP55899 365 aa8.62□□□□□ -1.03
SF3A3P1-201ENST00000446317 MAP2K1Q02750 393 aaPredicted RBP8.62□□□□□ -1.03
SF3A3P1-201ENST00000446317 TKFCQ3LXA3 575 aa8.62□□□□□ -1.03
SF3A3P1-201ENST00000446317 GJC2Q5T442 439 aaPredicted RBP8.62□□□□□ -1.03
SF3A3P1-201ENST00000446317 SEPT14Q6ZU15 432 aa8.62□□□□□ -1.03
SF3A3P1-201ENST00000446317 GTF3C2Q8WUA4 911 aaPredicted RBP8.62□□□□□ -1.03
SF3A3P1-201ENST00000446317 BCAS3Q9H6U6 928 aa8.62□□□□□ -1.03
SF3A3P1-201ENST00000446317 WBP1LQ9NX94 342 aa8.62□□□□□ -1.03
SF3A3P1-201ENST00000446317 TELO2Q9Y4R8 837 aa8.62□□□□□ -1.03
SF3A3P1-201ENST00000446317 PLXNB2O15031 1838 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 ESYT2A0FGR8 921 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 hCG_1984214I3L0E3 225 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 FKTNO75072 461 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 MARCKSP29966 332 aaPredicted RBP8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 MAPK4P31152 587 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 FLT3LGP49771 235 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 ALDH5A1P51649 535 aaPredicted RBP8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 ARHGAP4P98171 946 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 GRB14Q14449 540 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 KIF22Q14807 665 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 PGM5Q15124 567 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 PRR16Q569H4 304 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 SPECC1Q5M775 1068 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 TTC38Q5R3I4 469 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 KRT25Q7Z3Z0 450 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 ZNF713Q8N859 430 aaPredicted RBP8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 DAGLBQ8NCG7 672 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 IL27Q8NEV9 243 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 BICD2Q8TD16 824 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 USP28Q96RU2 1077 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 WDR11Q9BZH6 1224 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 TMEM60Q9H2L4 133 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 ZCCHC17Q9NP64 241 aaKnown RBP8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 PDGFCQ9NRA1 345 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 FBXO40Q9UH90 709 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 ZHX1Q9UKY1 873 aaPredicted RBP8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 TRIM17Q9Y577 477 aa8.61□□□□□ -1.03
SF3A3P1-201ENST00000446317 FAM86B1E9PN63 330 aa8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 CHMP2AO43633 222 aa8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 FAM86B2P0C5J1 330 aa8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 ARP10275 920 aa8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 HSPA8P11142 646 aaKnown RBP8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 U2AF2P26368 475 aaKnown RBP eCLIP8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 IRX5P78411 483 aaPredicted RBP8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 NUCB2P80303 420 aa8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 MRPS9P82933 396 aaKnown RBP8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 GRIN1Q05586 938 aa8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 PDE4DQ08499 809 aa8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 MAP2K5Q13163 448 aa8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 SF3A1Q15459 793 aaKnown RBP8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 ZNF792Q3KQV3 632 aa8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 MORN1Q5T089 497 aa8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 MYSM1Q5VVJ2 828 aa8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 FAM133AQ8N9E0 248 aa8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 SHCBP1Q8NEM2 672 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms