RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 CENPPQ6IPU0 288 aa19.91■□□□□ 0.78
CLDN9-201ENST00000445369 WDR59Q6PJI9 974 aa19.91■□□□□ 0.78
CLDN9-201ENST00000445369 ZSCAN29Q8IWY8 852 aaPredicted RBP19.91■□□□□ 0.78
CLDN9-201ENST00000445369 RAD54LQ92698 747 aa19.91■□□□□ 0.78
CLDN9-201ENST00000445369 GOLGA1Q92805 767 aa19.91■□□□□ 0.78
CLDN9-201ENST00000445369 MASTLQ96GX5 879 aa19.91■□□□□ 0.78
CLDN9-201ENST00000445369 CCDC17Q96LX7 622 aa19.91■□□□□ 0.78
CLDN9-201ENST00000445369 ZDHHC15Q96MV8 337 aa19.91■□□□□ 0.78
CLDN9-201ENST00000445369 TUBB2BQ9BVA1 445 aa19.91■□□□□ 0.78
CLDN9-201ENST00000445369 SEMA6BQ9H3T3 888 aa19.91■□□□□ 0.78
CLDN9-201ENST00000445369 CTAGE9A4FU28 777 aa19.91■□□□□ 0.78
CLDN9-201ENST00000445369 RASSF10A6NK89 507 aa19.91■□□□□ 0.78
CLDN9-201ENST00000445369 USP17L10C9JJH3 530 aa19.91■□□□□ 0.78
CLDN9-201ENST00000445369 SLC16A2P36021 539 aa19.91■□□□□ 0.78
CLDN9-201ENST00000445369 MEA1Q16626 185 aa19.91■□□□□ 0.78
CLDN9-201ENST00000445369 ZNF772Q68DY9 489 aaPredicted RBP19.91■□□□□ 0.78
CLDN9-201ENST00000445369 KCTD1Q719H9 257 aa19.91■□□□□ 0.78
CLDN9-201ENST00000445369 ZFPM1Q8IX07 1006 aa19.91■□□□□ 0.78
CLDN9-201ENST00000445369 RETREG2Q8NC44 543 aa19.91■□□□□ 0.78
CLDN9-201ENST00000445369 SNX29Q8TEQ0 813 aa19.91■□□□□ 0.78
CLDN9-201ENST00000445369 NUDT12Q9BQG2 462 aa19.91■□□□□ 0.78
CLDN9-201ENST00000445369 NUP58Q9BVL2 599 aa19.91■□□□□ 0.78
CLDN9-201ENST00000445369 SLC39A2Q9NP94 309 aa19.91■□□□□ 0.78
CLDN9-201ENST00000445369 SLURP2P0DP57 97 aa19.9■□□□□ 0.78
CLDN9-201ENST00000445369 UTP14CQ5TAP6 766 aaKnown RBP19.9■□□□□ 0.78
CLDN9-201ENST00000445369 KRT79Q5XKE5 535 aa19.9■□□□□ 0.78
CLDN9-201ENST00000445369 TMCO3Q6UWJ1 677 aa19.9■□□□□ 0.78
CLDN9-201ENST00000445369 SRGAP1Q7Z6B7 1085 aa19.9■□□□□ 0.78
CLDN9-201ENST00000445369 EEF2KMTQ96G04 330 aa19.9■□□□□ 0.78
CLDN9-201ENST00000445369 EPC1Q9H2F5 836 aa19.9■□□□□ 0.78
CLDN9-201ENST00000445369 DDX25Q9UHL0 483 aaKnown RBP19.9■□□□□ 0.78
CLDN9-201ENST00000445369 G3V3G9 751 aa19.9■□□□□ 0.78
CLDN9-201ENST00000445369 MTIF2P46199 727 aaKnown RBP19.9■□□□□ 0.78
CLDN9-201ENST00000445369 MRPL12P52815 198 aaKnown RBP19.9■□□□□ 0.78
CLDN9-201ENST00000445369 ATP2B2Q01814 1243 aa19.9■□□□□ 0.78
CLDN9-201ENST00000445369 TBC1D8BQ0IIM8 1120 aa19.9■□□□□ 0.78
CLDN9-201ENST00000445369 DCAF8Q5TAQ9 597 aa19.9■□□□□ 0.78
CLDN9-201ENST00000445369 PODNQ7Z5L7 613 aa19.9■□□□□ 0.78
CLDN9-201ENST00000445369 HAS1Q92839 578 aa19.9■□□□□ 0.78
CLDN9-201ENST00000445369 ATF5Q9Y2D1 282 aaPredicted RBP19.9■□□□□ 0.78
CLDN9-201ENST00000445369 PNMA6AP0CW24 399 aaPredicted RBP19.89■□□□□ 0.77
CLDN9-201ENST00000445369 GCFC2P16383 781 aaKnown RBP19.89■□□□□ 0.77
CLDN9-201ENST00000445369 GABPB1Q06547 395 aaPredicted RBP19.89■□□□□ 0.77
CLDN9-201ENST00000445369 EHHADHQ08426 723 aa19.89■□□□□ 0.77
CLDN9-201ENST00000445369 KIF4BQ2VIQ3 1234 aa19.89■□□□□ 0.77
CLDN9-201ENST00000445369 KCNK18Q7Z418 384 aa19.89■□□□□ 0.77
CLDN9-201ENST00000445369 CEP112Q8N8E3 955 aa19.89■□□□□ 0.77
CLDN9-201ENST00000445369 ERGIC2Q96RQ1 377 aa19.89■□□□□ 0.77
CLDN9-201ENST00000445369 NAPGQ99747 312 aaPredicted RBP19.89■□□□□ 0.77
CLDN9-201ENST00000445369 NOC4LQ9BVI4 516 aaKnown RBP19.89■□□□□ 0.77
CLDN9-201ENST00000445369 DBNDD1Q9H9R9 158 aa19.89■□□□□ 0.77
CLDN9-201ENST00000445369 HOXA7P31268 230 aaPredicted RBP19.88■□□□□ 0.77
CLDN9-201ENST00000445369 KLK7P49862 253 aa19.88■□□□□ 0.77
CLDN9-201ENST00000445369 CHMP4BP1P59074 171 aa19.88■□□□□ 0.77
CLDN9-201ENST00000445369 TSR1Q2NL82 804 aaKnown RBP19.88■□□□□ 0.77
CLDN9-201ENST00000445369 GUF1Q8N442 669 aaKnown RBP19.88■□□□□ 0.77
CLDN9-201ENST00000445369 MRIQ9BWK5 157 aa19.88■□□□□ 0.77
CLDN9-201ENST00000445369 TMX4Q9H1E5 349 aaPredicted RBP19.88■□□□□ 0.77
CLDN9-201ENST00000445369 PSTPIP2Q9H939 334 aa19.88■□□□□ 0.77
CLDN9-201ENST00000445369 KCNQ5Q9NR82 932 aa19.88■□□□□ 0.77
CLDN9-201ENST00000445369 AGPAT5Q9NUQ2 364 aa19.88■□□□□ 0.77
CLDN9-201ENST00000445369 NKRFO15226 690 aaKnown RBP eCLIP19.88■□□□□ 0.77
CLDN9-201ENST00000445369 MMP10P09238 476 aa19.88■□□□□ 0.77
CLDN9-201ENST00000445369 TRIM21P19474 475 aaKnown RBP19.88■□□□□ 0.77
CLDN9-201ENST00000445369 FIGNQ5HY92 759 aa19.88■□□□□ 0.77
CLDN9-201ENST00000445369 DYMQ7RTS9 669 aa19.88■□□□□ 0.77
CLDN9-201ENST00000445369 MKL1Q969V6 931 aa19.88■□□□□ 0.77
CLDN9-201ENST00000445369 LRRC27Q9C0I9 530 aa19.88■□□□□ 0.77
CLDN9-201ENST00000445369 DHX36Q9H2U1 1008 aaKnown RBP19.88■□□□□ 0.77
CLDN9-201ENST00000445369 HERVK_113P62684 666 aa19.87■□□□□ 0.77
CLDN9-201ENST00000445369 FKBP1AP62942 108 aaKnown RBP19.87■□□□□ 0.77
CLDN9-201ENST00000445369 ZBED6P86452 979 aa19.87■□□□□ 0.77
CLDN9-201ENST00000445369 ECM1Q16610 540 aa19.87■□□□□ 0.77
CLDN9-201ENST00000445369 PCDHAC2Q9Y5I4 1007 aa19.87■□□□□ 0.77
CLDN9-201ENST00000445369 ABCB11O95342 1321 aa19.87■□□□□ 0.77
CLDN9-201ENST00000445369 A0A1W2PQJ5 194 aa19.87■□□□□ 0.77
CLDN9-201ENST00000445369 APBA3O96018 575 aa19.87■□□□□ 0.77
CLDN9-201ENST00000445369 QRICH1Q2TAL8 776 aa19.87■□□□□ 0.77
CLDN9-201ENST00000445369 ZNF662Q6ZS27 426 aa19.87■□□□□ 0.77
CLDN9-201ENST00000445369 DCAF4Q8WV16 495 aa19.87■□□□□ 0.77
CLDN9-201ENST00000445369 DDX12PQ92771 950 aa19.87■□□□□ 0.77
CLDN9-201ENST00000445369 NAP1L4Q99733 375 aaKnown RBP19.87■□□□□ 0.77
CLDN9-201ENST00000445369 IDI2Q9BXS1 227 aa19.87■□□□□ 0.77
CLDN9-201ENST00000445369 PARD6BQ9BYG5 372 aa19.87■□□□□ 0.77
CLDN9-201ENST00000445369 HAUS4Q9H6D7 363 aa19.87■□□□□ 0.77
CLDN9-201ENST00000445369 NYAP2Q9P242 653 aa19.87■□□□□ 0.77
CLDN9-201ENST00000445369 DDTLA6NHG4 134 aaPredicted RBP19.86■□□□□ 0.77
CLDN9-201ENST00000445369 EEF2P13639 858 aaKnown RBP19.86■□□□□ 0.77
CLDN9-201ENST00000445369 CACNB3P54284 484 aa19.86■□□□□ 0.77
CLDN9-201ENST00000445369 HYIQ5T013 277 aa19.86■□□□□ 0.77
CLDN9-201ENST00000445369 CC2D1AQ6P1N0 951 aaPredicted RBP19.86■□□□□ 0.77
CLDN9-201ENST00000445369 KIAA0825Q8IV33 1275 aa19.86■□□□□ 0.77
CLDN9-201ENST00000445369 GLT8D2Q9H1C3 349 aa19.86■□□□□ 0.77
CLDN9-201ENST00000445369 FAM198AQ9UFP1 575 aa19.86■□□□□ 0.77
CLDN9-201ENST00000445369 SLX4Q8IY92 1834 aa19.85■□□□□ 0.77
CLDN9-201ENST00000445369 FAM196BA6NMK8 535 aa19.85■□□□□ 0.77
CLDN9-201ENST00000445369 ATP8B1O43520 1251 aa19.85■□□□□ 0.77
CLDN9-201ENST00000445369 SEC31AO94979 1220 aaKnown RBP19.85■□□□□ 0.77
CLDN9-201ENST00000445369 HDLBPQ00341 1268 aaKnown RBP19.85■□□□□ 0.77
CLDN9-201ENST00000445369 AMPD2Q01433 879 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms