RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 LARP6Q9BRS8 491 aaKnown RBP27.63■■■□□ 2.01
C9orf3-207ENST00000445181 FAM217BQ9NTX9 383 aaPredicted RBP27.63■■■□□ 2.01
C9orf3-207ENST00000445181 MAP3K20Q9NYL2 800 aaKnown RBP27.63■■■□□ 2.01
C9orf3-207ENST00000445181 ATP11BQ9Y2G3 1177 aa27.63■■■□□ 2.01
C9orf3-207ENST00000445181 PDIA3P30101 505 aaKnown RBP27.62■■■□□ 2.01
C9orf3-207ENST00000445181 HOXA13P31271 388 aaPredicted RBP27.62■■■□□ 2.01
C9orf3-207ENST00000445181 HSD17B4P51659 736 aa27.62■■■□□ 2.01
C9orf3-207ENST00000445181 EVCP57679 992 aa27.62■■■□□ 2.01
C9orf3-207ENST00000445181 CCDC144BQ3MJ40 725 aa27.62■■■□□ 2.01
C9orf3-207ENST00000445181 ARHGEF16Q5VV41 709 aa27.62■■■□□ 2.01
C9orf3-207ENST00000445181 FBXO16Q8IX29 292 aaPredicted RBP27.62■■■□□ 2.01
C9orf3-207ENST00000445181 SAMD3Q8N6K7 520 aa27.62■■■□□ 2.01
C9orf3-207ENST00000445181 NSUN6Q8TEA1 469 aaKnown RBP27.62■■■□□ 2.01
C9orf3-207ENST00000445181 RMDN3Q96TC7 470 aa27.62■■■□□ 2.01
C9orf3-207ENST00000445181 COL20A1Q9P218 1284 aa27.62■■■□□ 2.01
C9orf3-207ENST00000445181 PHF24Q9UPV7 400 aa27.62■■■□□ 2.01
C9orf3-207ENST00000445181 V9GY48 417 aaPredicted RBP27.62■■■□□ 2.01
C9orf3-207ENST00000445181 CCT2P78371 535 aaKnown RBP27.61■■■□□ 2.01
C9orf3-207ENST00000445181 MORC4Q8TE76 937 aa27.61■■■□□ 2.01
C9orf3-207ENST00000445181 VTA1Q9NP79 307 aa27.61■■■□□ 2.01
C9orf3-207ENST00000445181 NID2Q14112 1375 aa27.6■■■□□ 2.01
C9orf3-207ENST00000445181 ADAMTS4O75173 837 aa27.6■■■□□ 2.01
C9orf3-207ENST00000445181 DUSP11O75319 330 aaKnown RBP27.6■■■□□ 2.01
C9orf3-207ENST00000445181 GHRHRQ02643 423 aa27.6■■■□□ 2.01
C9orf3-207ENST00000445181 FUT2Q10981 343 aa27.6■■■□□ 2.01
C9orf3-207ENST00000445181 NOL8Q76FK4 1167 aaKnown RBP27.6■■■□□ 2.01
C9orf3-207ENST00000445181 GPKOWQ92917 476 aaPredicted RBP eCLIP27.6■■■□□ 2.01
C9orf3-207ENST00000445181 CUL5Q93034 780 aa27.6■■■□□ 2.01
C9orf3-207ENST00000445181 ZNF274Q96GC6 653 aaPredicted RBP27.6■■■□□ 2.01
C9orf3-207ENST00000445181 UBE2OQ9C0C9 1292 aaKnown RBP27.6■■■□□ 2.01
C9orf3-207ENST00000445181 KATNBL1Q9H079 304 aa27.6■■■□□ 2.01
C9orf3-207ENST00000445181 EIF2AK2P19525 551 aaKnown RBP27.59■■■□□ 2.01
C9orf3-207ENST00000445181 MDM2Q00987 491 aaPredicted RBP27.59■■■□□ 2.01
C9orf3-207ENST00000445181 STK3Q13188 491 aa27.59■■■□□ 2.01
C9orf3-207ENST00000445181 SNX17Q15036 470 aa27.59■■■□□ 2.01
C9orf3-207ENST00000445181 ANKRD1Q15327 319 aa27.59■■■□□ 2.01
C9orf3-207ENST00000445181 FCHSD1Q86WN1 690 aa27.59■■■□□ 2.01
C9orf3-207ENST00000445181 IL17RAQ96F46 866 aa27.59■■■□□ 2.01
C9orf3-207ENST00000445181 NCOA5Q9HCD5 579 aaKnown RBP27.59■■■□□ 2.01
C9orf3-207ENST00000445181 PRKAG2Q9UGJ0 569 aa27.59■■■□□ 2.01
C9orf3-207ENST00000445181 SYNRGQ9UMZ2 1314 aa27.59■■■□□ 2.01
C9orf3-207ENST00000445181 NEK4P51957 841 aa27.58■■■□□ 2.01
C9orf3-207ENST00000445181 AKAP17AQ02040 695 aaKnown RBP27.58■■■□□ 2.01
C9orf3-207ENST00000445181 TNFAIP2Q03169 654 aa27.58■■■□□ 2.01
C9orf3-207ENST00000445181 TRIM60Q495X7 471 aa27.58■■■□□ 2.01
C9orf3-207ENST00000445181 SMARCC2Q8TAQ2 1214 aa27.58■■■□□ 2.01
C9orf3-207ENST00000445181 LBHD1Q9BQE6 289 aaPredicted RBP27.58■■■□□ 2.01
C9orf3-207ENST00000445181 TSEN34Q9BSV6 310 aaKnown RBP27.58■■■□□ 2.01
C9orf3-207ENST00000445181 UPF2Q9HAU5 1272 aaKnown RBP27.58■■■□□ 2.01
C9orf3-207ENST00000445181 ADCY6O43306 1168 aa27.57■■■□□ 2
C9orf3-207ENST00000445181 EDNRBP24530 442 aa27.57■■■□□ 2
C9orf3-207ENST00000445181 WWC2Q6AWC2 1192 aa27.57■■■□□ 2
C9orf3-207ENST00000445181 KLHDC9Q8NEP7 349 aa27.57■■■□□ 2
C9orf3-207ENST00000445181 IWS1Q96ST2 819 aa27.57■■■□□ 2
C9orf3-207ENST00000445181 C22orf23Q9BZE7 217 aa27.57■■■□□ 2
C9orf3-207ENST00000445181 ALDH8A1Q9H2A2 487 aaPredicted RBP27.57■■■□□ 2
C9orf3-207ENST00000445181 PSTPIP2Q9H939 334 aa27.57■■■□□ 2
C9orf3-207ENST00000445181 PXMP2Q9NR77 195 aa27.57■■■□□ 2
C9orf3-207ENST00000445181 PDGFCQ9NRA1 345 aa27.57■■■□□ 2
C9orf3-207ENST00000445181 DNAH12Q6ZR08 3092 aa27.56■■■□□ 2
C9orf3-207ENST00000445181 A0A1W2PQ45 241 aaPredicted RBP27.56■■■□□ 2
C9orf3-207ENST00000445181 A0A1W2PQY0 241 aa27.56■■■□□ 2
C9orf3-207ENST00000445181 CPLX1O14810 134 aa27.56■■■□□ 2
C9orf3-207ENST00000445181 AK2P54819 239 aa27.56■■■□□ 2
C9orf3-207ENST00000445181 NAPAP54920 295 aa27.56■■■□□ 2
C9orf3-207ENST00000445181 C1orf53Q5VUE5 145 aa27.56■■■□□ 2
C9orf3-207ENST00000445181 TAPT1Q6NXT6 567 aa27.56■■■□□ 2
C9orf3-207ENST00000445181 SPC25Q9HBM1 224 aa27.56■■■□□ 2
C9orf3-207ENST00000445181 RANBP2P49792 3224 aaKnown RBP27.56■■■□□ 2
C9orf3-207ENST00000445181 LRRC37A2A6NM11 1700 aa27.55■■■□□ 2
C9orf3-207ENST00000445181 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.55■■■□□ 2
C9orf3-207ENST00000445181 hCG_1984214I3L0E3 225 aa27.55■■■□□ 2
C9orf3-207ENST00000445181 ACLYP53396 1101 aa27.55■■■□□ 2
C9orf3-207ENST00000445181 STXBP2Q15833 593 aa27.55■■■□□ 2
C9orf3-207ENST00000445181 KCNA10Q16322 511 aa27.55■■■□□ 2
C9orf3-207ENST00000445181 IQSEC1Q6DN90 963 aa27.55■■■□□ 2
C9orf3-207ENST00000445181 USP17L6PQ6QN14 398 aa27.55■■■□□ 2
C9orf3-207ENST00000445181 ZNF713Q8N859 430 aaPredicted RBP27.55■■■□□ 2
C9orf3-207ENST00000445181 PHKBQ93100 1093 aa27.55■■■□□ 2
C9orf3-207ENST00000445181 MYADML2A6NDP7 307 aa27.54■■■□□ 2
C9orf3-207ENST00000445181 PPFIA3O75145 1194 aa27.54■■■□□ 2
C9orf3-207ENST00000445181 C6orf222P0C671 652 aaPredicted RBP27.54■■■□□ 2
C9orf3-207ENST00000445181 IRX5P78411 483 aaPredicted RBP27.54■■■□□ 2
C9orf3-207ENST00000445181 TLE2Q04725 743 aa27.54■■■□□ 2
C9orf3-207ENST00000445181 CPLX2Q6PUV4 134 aaKnown RBP27.54■■■□□ 2
C9orf3-207ENST00000445181 TDHQ8IZJ6 230 aa27.54■■■□□ 2
C9orf3-207ENST00000445181 SLC26A6Q9BXS9 759 aa27.54■■■□□ 2
C9orf3-207ENST00000445181 SLKQ9H2G2 1235 aaPredicted RBP27.54■■■□□ 2
C9orf3-207ENST00000445181 PRDM5Q9NQX1 630 aaPredicted RBP27.54■■■□□ 2
C9orf3-207ENST00000445181 SOX1O00570 391 aaPredicted RBP27.53■■■□□ 2
C9orf3-207ENST00000445181 PRPF3O43395 683 aaKnown RBP27.53■■■□□ 2
C9orf3-207ENST00000445181 NR3C2P08235 984 aa27.53■■■□□ 2
C9orf3-207ENST00000445181 MYCLP12524 364 aaPredicted RBP27.53■■■□□ 2
C9orf3-207ENST00000445181 IFNAR1P17181 557 aa27.53■■■□□ 2
C9orf3-207ENST00000445181 GJA9P57773 515 aa27.53■■■□□ 2
C9orf3-207ENST00000445181 PFKFB3Q16875 520 aaPredicted RBP27.53■■■□□ 2
C9orf3-207ENST00000445181 CCSAPQ6IQ19 270 aaPredicted RBP27.53■■■□□ 2
C9orf3-207ENST00000445181 PPP1R18Q6NYC8 613 aa27.53■■■□□ 2
C9orf3-207ENST00000445181 WDR11Q9BZH6 1224 aa27.53■■■□□ 2
C9orf3-207ENST00000445181 UPF3AQ9H1J1 476 aaKnown RBP27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms