RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 TTLL1O95922 423 aa10.85□□□□□ -0.67
LINC00642-203ENST00000444942 AKR1A1P14550 325 aa10.85□□□□□ -0.67
LINC00642-203ENST00000444942 KCTD2Q14681 263 aa10.85□□□□□ -0.67
LINC00642-203ENST00000444942 FAM83BQ5T0W9 1011 aa10.85□□□□□ -0.67
LINC00642-203ENST00000444942 RASGRP2Q7LDG7 609 aa10.85□□□□□ -0.67
LINC00642-203ENST00000444942 SPRED2Q7Z698 418 aa10.85□□□□□ -0.67
LINC00642-203ENST00000444942 ADHFE1Q8IWW8 467 aa10.85□□□□□ -0.67
LINC00642-203ENST00000444942 MOV10L1Q9BXT6 1211 aaKnown RBP10.85□□□□□ -0.67
LINC00642-203ENST00000444942 RNF41Q9H4P4 317 aaPredicted RBP10.85□□□□□ -0.67
LINC00642-203ENST00000444942 FBXO28Q9NVF7 368 aa10.85□□□□□ -0.67
LINC00642-203ENST00000444942 NYAP2Q9P242 653 aa10.85□□□□□ -0.67
LINC00642-203ENST00000444942 TAF6LQ9Y6J9 622 aa10.85□□□□□ -0.67
LINC00642-203ENST00000444942 U3KPZ7 1027 aaPredicted RBP10.85□□□□□ -0.67
LINC00642-203ENST00000444942 TMEM221A6NGB7 291 aa10.84□□□□□ -0.67
LINC00642-203ENST00000444942 SPDYE16A6NNV3 312 aaPredicted RBP10.84□□□□□ -0.67
LINC00642-203ENST00000444942 F5H6K3 240 aa10.84□□□□□ -0.67
LINC00642-203ENST00000444942 M0R296 226 aa10.84□□□□□ -0.67
LINC00642-203ENST00000444942 FLOT1O75955 427 aa10.84□□□□□ -0.67
LINC00642-203ENST00000444942 NDUFB10O96000 172 aa10.84□□□□□ -0.67
LINC00642-203ENST00000444942 CYP21A2P08686 494 aa10.84□□□□□ -0.67
LINC00642-203ENST00000444942 ZNF865P0CJ78 1059 aaPredicted RBP10.84□□□□□ -0.67
LINC00642-203ENST00000444942 TAL1P17542 331 aaPredicted RBP10.84□□□□□ -0.67
LINC00642-203ENST00000444942 CCL23P55773 120 aa10.84□□□□□ -0.67
LINC00642-203ENST00000444942 KLRC3Q07444 240 aa10.84□□□□□ -0.67
LINC00642-203ENST00000444942 PLS1Q14651 629 aa10.84□□□□□ -0.67
LINC00642-203ENST00000444942 TTLL4Q14679 1199 aa10.84□□□□□ -0.67
LINC00642-203ENST00000444942 SLFN13Q68D06 897 aa10.84□□□□□ -0.67
LINC00642-203ENST00000444942 TRIM67Q6ZTA4 783 aa10.84□□□□□ -0.67
LINC00642-203ENST00000444942 HSCBQ8IWL3 235 aa10.84□□□□□ -0.67
LINC00642-203ENST00000444942 ABRAQ8N0Z2 381 aa10.84□□□□□ -0.67
LINC00642-203ENST00000444942 FBXL6Q8N531 539 aa10.84□□□□□ -0.67
LINC00642-203ENST00000444942 SHCBP1Q8NEM2 672 aa10.84□□□□□ -0.67
LINC00642-203ENST00000444942 GDPD5Q8WTR4 605 aa10.84□□□□□ -0.67
LINC00642-203ENST00000444942 SLC9A7Q96T83 725 aa10.84□□□□□ -0.67
LINC00642-203ENST00000444942 LSG1Q9H089 658 aaKnown RBP10.84□□□□□ -0.67
LINC00642-203ENST00000444942 WNT8AQ9H1J5 351 aa10.84□□□□□ -0.67
LINC00642-203ENST00000444942 FAM50BQ9Y247 325 aa10.84□□□□□ -0.67
LINC00642-203ENST00000444942 FASNP49327 2511 aaKnown RBP10.83□□□□□ -0.67
LINC00642-203ENST00000444942 PLIN4Q96Q06 1357 aa10.83□□□□□ -0.68
LINC00642-203ENST00000444942 MYADML2A6NDP7 307 aa10.83□□□□□ -0.68
LINC00642-203ENST00000444942 WDR46O15213 610 aaKnown RBP10.83□□□□□ -0.68
LINC00642-203ENST00000444942 REC8O95072 547 aa10.83□□□□□ -0.68
LINC00642-203ENST00000444942 ASGR1P07306 291 aa10.83□□□□□ -0.68
LINC00642-203ENST00000444942 FGRP09769 529 aa10.83□□□□□ -0.68
LINC00642-203ENST00000444942 ERCC3P19447 782 aa10.83□□□□□ -0.68
LINC00642-203ENST00000444942 CST5P28325 142 aaPredicted RBP10.83□□□□□ -0.68
LINC00642-203ENST00000444942 COL9A2Q14055 689 aaPredicted RBP10.83□□□□□ -0.68
LINC00642-203ENST00000444942 NBR1Q14596 966 aa10.83□□□□□ -0.68
LINC00642-203ENST00000444942 CHST3Q7LGC8 479 aa10.83□□□□□ -0.68
LINC00642-203ENST00000444942 PHOSPHO2Q8TCD6 241 aa10.83□□□□□ -0.68
LINC00642-203ENST00000444942 ESR2Q92731 530 aa10.83□□□□□ -0.68
LINC00642-203ENST00000444942 MAP4K1Q92918 833 aa10.83□□□□□ -0.68
LINC00642-203ENST00000444942 ATG4CQ96DT6 458 aa10.83□□□□□ -0.68
LINC00642-203ENST00000444942 NOC4LQ9BVI4 516 aaKnown RBP10.83□□□□□ -0.68
LINC00642-203ENST00000444942 SETXQ7Z333 2677 aaKnown RBP10.83□□□□□ -0.68
LINC00642-203ENST00000444942 EP300Q09472 2414 aaPredicted RBP10.83□□□□□ -0.68
LINC00642-203ENST00000444942 FAM208BQ5VWN6 2430 aa10.83□□□□□ -0.68
LINC00642-203ENST00000444942 CEP250Q9BV73 2442 aa10.82□□□□□ -0.68
LINC00642-203ENST00000444942 E7EWF7 191 aa10.82□□□□□ -0.68
LINC00642-203ENST00000444942 H0Y858 1186 aa10.82□□□□□ -0.68
LINC00642-203ENST00000444942 H3BQ06 376 aaPredicted RBP10.82□□□□□ -0.68
LINC00642-203ENST00000444942 PFKMP08237 780 aa10.82□□□□□ -0.68
LINC00642-203ENST00000444942 MCCP23508 829 aa10.82□□□□□ -0.68
LINC00642-203ENST00000444942 IKQ13123 557 aaPredicted RBP10.82□□□□□ -0.68
LINC00642-203ENST00000444942 COG2Q14746 738 aa10.82□□□□□ -0.68
LINC00642-203ENST00000444942 CCDC96Q2M329 555 aa10.82□□□□□ -0.68
LINC00642-203ENST00000444942 STOX1Q6ZVD7 989 aa10.82□□□□□ -0.68
LINC00642-203ENST00000444942 KCTD1Q719H9 257 aa10.82□□□□□ -0.68
LINC00642-203ENST00000444942 CYB5R4Q7L1T6 521 aa10.82□□□□□ -0.68
LINC00642-203ENST00000444942 RNF135Q8IUD6 432 aa10.82□□□□□ -0.68
LINC00642-203ENST00000444942 PCSK9Q8NBP7 692 aaKnown RBP10.82□□□□□ -0.68
LINC00642-203ENST00000444942 VTI1AQ96AJ9 217 aa10.82□□□□□ -0.68
LINC00642-203ENST00000444942 TINF2Q9BSI4 451 aa10.82□□□□□ -0.68
LINC00642-203ENST00000444942 TLR9Q9NR96 1032 aa10.82□□□□□ -0.68
LINC00642-203ENST00000444942 ZSWIM5Q9P217 1185 aa10.82□□□□□ -0.68
LINC00642-203ENST00000444942 FRMPD2Q68DX3 1309 aaPredicted RBP10.81□□□□□ -0.68
LINC00642-203ENST00000444942 KIF28PB7ZC32 967 aa10.81□□□□□ -0.68
LINC00642-203ENST00000444942 SLC27A2O14975 620 aa10.81□□□□□ -0.68
LINC00642-203ENST00000444942 NBL1P41271 181 aa10.81□□□□□ -0.68
LINC00642-203ENST00000444942 SNAP25P60880 206 aa10.81□□□□□ -0.68
LINC00642-203ENST00000444942 TRDNQ13061 729 aa10.81□□□□□ -0.68
LINC00642-203ENST00000444942 DGLUCYQ7Z3D6 616 aa10.81□□□□□ -0.68
LINC00642-203ENST00000444942 RALYLQ86SE5 291 aaKnown RBP10.81□□□□□ -0.68
LINC00642-203ENST00000444942 HERC6Q8IVU3 1022 aa10.81□□□□□ -0.68
LINC00642-203ENST00000444942 MKL1Q969V6 931 aa10.81□□□□□ -0.68
LINC00642-203ENST00000444942 KIFC2Q96AC6 838 aa10.81□□□□□ -0.68
LINC00642-203ENST00000444942 TMEM47Q9BQJ4 181 aa10.81□□□□□ -0.68
LINC00642-203ENST00000444942 KRT23Q9C075 422 aa10.81□□□□□ -0.68
LINC00642-203ENST00000444942 SPATC1LQ9H0A9 340 aa10.81□□□□□ -0.68
LINC00642-203ENST00000444942 MROH8Q9H579 483 aa10.81□□□□□ -0.68
LINC00642-203ENST00000444942 GPCPD1Q9NPB8 672 aa10.81□□□□□ -0.68
LINC00642-203ENST00000444942 TET1Q8NFU7 2136 aa10.81□□□□□ -0.68
LINC00642-203ENST00000444942 MCM3APO60318 1980 aa10.81□□□□□ -0.68
LINC00642-203ENST00000444942 MYH6P13533 1939 aa10.8□□□□□ -0.68
LINC00642-203ENST00000444942 TMEM232C9JQI7 657 aa10.8□□□□□ -0.68
LINC00642-203ENST00000444942 TOP1P11387 765 aaKnown RBP10.8□□□□□ -0.68
LINC00642-203ENST00000444942 PCP11498 1178 aaKnown RBP10.8□□□□□ -0.68
LINC00642-203ENST00000444942 BMP3P12645 472 aa10.8□□□□□ -0.68
LINC00642-203ENST00000444942 DSG3P32926 999 aa10.8□□□□□ -0.68
LINC00642-203ENST00000444942 SLC1A4P43007 532 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms