RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 STAG2Q8N3U4 1231 aa12.85□□□□□ -0.35
HLA-F-221ENST00000444621 UHRF1Q96T88 793 aaPredicted RBP12.85□□□□□ -0.35
HLA-F-221ENST00000444621 GAS2L1Q99501 681 aaPredicted RBP12.85□□□□□ -0.35
HLA-F-221ENST00000444621 CPVLQ9H3G5 476 aa12.85□□□□□ -0.35
HLA-F-221ENST00000444621 MAP3K20Q9NYL2 800 aaKnown RBP12.85□□□□□ -0.35
HLA-F-221ENST00000444621 SEC63Q9UGP8 760 aaKnown RBP12.85□□□□□ -0.35
HLA-F-221ENST00000444621 PCDHA1Q9Y5I3 950 aa12.85□□□□□ -0.35
HLA-F-221ENST00000444621 PNMA6FA0A0J9YX94 578 aa12.84□□□□□ -0.35
HLA-F-221ENST00000444621 PQBP1O60828 265 aaKnown RBP12.84□□□□□ -0.35
HLA-F-221ENST00000444621 SMARCA1P28370 1054 aa12.84□□□□□ -0.35
HLA-F-221ENST00000444621 HOXD11P31277 338 aaPredicted RBP12.84□□□□□ -0.35
HLA-F-221ENST00000444621 MRPS5P82675 430 aaKnown RBP12.84□□□□□ -0.35
HLA-F-221ENST00000444621 GNASQ5JWF2 1037 aa12.84□□□□□ -0.35
HLA-F-221ENST00000444621 HOMER1Q86YM7 354 aa12.84□□□□□ -0.35
HLA-F-221ENST00000444621 NSUN6Q8TEA1 469 aaKnown RBP12.84□□□□□ -0.35
HLA-F-221ENST00000444621 CLEC4DQ8WXI8 215 aa12.84□□□□□ -0.35
HLA-F-221ENST00000444621 RRP36Q96EU6 259 aaKnown RBP12.84□□□□□ -0.35
HLA-F-221ENST00000444621 GLT1D1Q96MS3 346 aa12.84□□□□□ -0.35
HLA-F-221ENST00000444621 LY9Q9HBG7 655 aa12.84□□□□□ -0.35
HLA-F-221ENST00000444621 TMEM39AQ9NV64 488 aa12.84□□□□□ -0.35
HLA-F-221ENST00000444621 PHF24Q9UPV7 400 aa12.84□□□□□ -0.35
HLA-F-221ENST00000444621 Q9Y3F1 56 aa12.84□□□□□ -0.35
HLA-F-221ENST00000444621 REV3LO60673 3130 aa12.84□□□□□ -0.35
HLA-F-221ENST00000444621 CFBP00751 764 aa12.83□□□□□ -0.36
HLA-F-221ENST00000444621 PSMA5P28066 241 aa12.83□□□□□ -0.36
HLA-F-221ENST00000444621 PBX2P40425 430 aa12.83□□□□□ -0.36
HLA-F-221ENST00000444621 GJA9P57773 515 aa12.83□□□□□ -0.36
HLA-F-221ENST00000444621 ANTXR2P58335 489 aa12.83□□□□□ -0.36
HLA-F-221ENST00000444621 TROAPQ12815 778 aa12.83□□□□□ -0.36
HLA-F-221ENST00000444621 CCDC85BQ15834 202 aaPredicted RBP12.83□□□□□ -0.36
HLA-F-221ENST00000444621 ARHGEF16Q5VV41 709 aa12.83□□□□□ -0.36
HLA-F-221ENST00000444621 DHX32Q7L7V1 743 aaKnown RBP12.83□□□□□ -0.36
HLA-F-221ENST00000444621 EEPD1Q7L9B9 569 aa12.83□□□□□ -0.36
HLA-F-221ENST00000444621 CUL5Q93034 780 aa12.83□□□□□ -0.36
HLA-F-221ENST00000444621 IWS1Q96ST2 819 aa12.83□□□□□ -0.36
HLA-F-221ENST00000444621 PRDM12Q9H4Q4 367 aa12.83□□□□□ -0.36
HLA-F-221ENST00000444621 RIOX1Q9H6W3 641 aa12.83□□□□□ -0.36
HLA-F-221ENST00000444621 STARD7Q9NQZ5 370 aa12.83□□□□□ -0.36
HLA-F-221ENST00000444621 MROH7Q68CQ1 1323 aa12.83□□□□□ -0.36
HLA-F-221ENST00000444621 SYNRGQ9UMZ2 1314 aa12.83□□□□□ -0.36
HLA-F-221ENST00000444621 GBF1Q92538 1859 aa12.82□□□□□ -0.36
HLA-F-221ENST00000444621 CHD9Q3L8U1 2897 aa12.82□□□□□ -0.36
HLA-F-221ENST00000444621 GRXCR1A8MXD5 290 aa12.82□□□□□ -0.36
HLA-F-221ENST00000444621 DCDC2CA8MYV0 355 aa12.82□□□□□ -0.36
HLA-F-221ENST00000444621 SH2B2O14492 632 aaPredicted RBP12.82□□□□□ -0.36
HLA-F-221ENST00000444621 NKRFO15226 690 aaKnown RBP eCLIP12.82□□□□□ -0.36
HLA-F-221ENST00000444621 DYNC1LI2O43237 492 aaPredicted RBP12.82□□□□□ -0.36
HLA-F-221ENST00000444621 CABYRO75952 493 aa12.82□□□□□ -0.36
HLA-F-221ENST00000444621 ACLYP53396 1101 aa12.82□□□□□ -0.36
HLA-F-221ENST00000444621 FAAP100Q0VG06 881 aa12.82□□□□□ -0.36
HLA-F-221ENST00000444621 STXBP2Q15833 593 aa12.82□□□□□ -0.36
HLA-F-221ENST00000444621 KCNA10Q16322 511 aa12.82□□□□□ -0.36
HLA-F-221ENST00000444621 TSGA10IPQ3SY00 556 aa12.82□□□□□ -0.36
HLA-F-221ENST00000444621 SLC30A10Q6XR72 485 aa12.82□□□□□ -0.36
HLA-F-221ENST00000444621 FBXO16Q8IX29 292 aaPredicted RBP12.82□□□□□ -0.36
HLA-F-221ENST00000444621 IL27Q8NEV9 243 aa12.82□□□□□ -0.36
HLA-F-221ENST00000444621 MORC4Q8TE76 937 aa12.82□□□□□ -0.36
HLA-F-221ENST00000444621 SCFD2Q8WU76 684 aa12.82□□□□□ -0.36
HLA-F-221ENST00000444621 FGD4Q96M96 766 aa12.82□□□□□ -0.36
HLA-F-221ENST00000444621 PIGSQ96S52 555 aa12.82□□□□□ -0.36
HLA-F-221ENST00000444621 RMDN3Q96TC7 470 aa12.82□□□□□ -0.36
HLA-F-221ENST00000444621 SEZ6LQ9BYH1 1024 aa12.82□□□□□ -0.36
HLA-F-221ENST00000444621 WDR11Q9BZH6 1224 aa12.82□□□□□ -0.36
HLA-F-221ENST00000444621 GPHNQ9NQX3 736 aaPredicted RBP12.82□□□□□ -0.36
HLA-F-221ENST00000444621 NAP1L2Q9ULW6 460 aaPredicted RBP12.82□□□□□ -0.36
HLA-F-221ENST00000444621 TAF6LQ9Y6J9 622 aa12.82□□□□□ -0.36
HLA-F-221ENST00000444621 MCM3APO60318 1980 aa12.81□□□□□ -0.36
HLA-F-221ENST00000444621 A0A1W2PQ45 241 aaPredicted RBP12.81□□□□□ -0.36
HLA-F-221ENST00000444621 A0A1W2PQY0 241 aa12.81□□□□□ -0.36
HLA-F-221ENST00000444621 GCOM1H8Y6P7 765 aaPredicted RBP12.81□□□□□ -0.36
HLA-F-221ENST00000444621 EPB41L2O43491 1005 aaKnown RBP12.81□□□□□ -0.36
HLA-F-221ENST00000444621 ADAMTS4O75173 837 aa12.81□□□□□ -0.36
HLA-F-221ENST00000444621 POLR2MP0CAP2 368 aa12.81□□□□□ -0.36
HLA-F-221ENST00000444621 CST5P28325 142 aaPredicted RBP12.81□□□□□ -0.36
HLA-F-221ENST00000444621 ADGRE1Q14246 886 aa12.81□□□□□ -0.36
HLA-F-221ENST00000444621 TTLL4Q14679 1199 aa12.81□□□□□ -0.36
HLA-F-221ENST00000444621 DUSP28Q4G0W2 176 aa12.81□□□□□ -0.36
HLA-F-221ENST00000444621 TLK2Q86UE8 772 aa12.81□□□□□ -0.36
HLA-F-221ENST00000444621 FANCBQ8NB91 859 aa12.81□□□□□ -0.36
HLA-F-221ENST00000444621 KLHDC9Q8NEP7 349 aa12.81□□□□□ -0.36
HLA-F-221ENST00000444621 MTMR8Q96EF0 704 aa12.81□□□□□ -0.36
HLA-F-221ENST00000444621 NECAB3Q96P71 396 aaPredicted RBP12.81□□□□□ -0.36
HLA-F-221ENST00000444621 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.81□□□□□ -0.36
HLA-F-221ENST00000444621 SPZ1Q9BXG8 430 aa12.81□□□□□ -0.36
HLA-F-221ENST00000444621 PBX4Q9BYU1 374 aa12.81□□□□□ -0.36
HLA-F-221ENST00000444621 UPF3AQ9H1J1 476 aaKnown RBP12.81□□□□□ -0.36
HLA-F-221ENST00000444621 RBM28Q9NW13 759 aaKnown RBP12.81□□□□□ -0.36
HLA-F-221ENST00000444621 ELP1O95163 1332 aa12.81□□□□□ -0.36
HLA-F-221ENST00000444621 TLR3O15455 904 aaKnown RBP12.8□□□□□ -0.36
HLA-F-221ENST00000444621 ASGR1P07306 291 aa12.8□□□□□ -0.36
HLA-F-221ENST00000444621 IGFBP4P22692 258 aa12.8□□□□□ -0.36
HLA-F-221ENST00000444621 CPT1AP50416 773 aa12.8□□□□□ -0.36
HLA-F-221ENST00000444621 PPP2R5BQ15173 497 aa12.8□□□□□ -0.36
HLA-F-221ENST00000444621 FSCN1Q16658 493 aaKnown RBP12.8□□□□□ -0.36
HLA-F-221ENST00000444621 TAPT1Q6NXT6 567 aa12.8□□□□□ -0.36
HLA-F-221ENST00000444621 BLOC1S2Q6QNY1 142 aa12.8□□□□□ -0.36
HLA-F-221ENST00000444621 SGMS1Q86VZ5 419 aa12.8□□□□□ -0.36
HLA-F-221ENST00000444621 SYTL5Q8TDW5 730 aaPredicted RBP12.8□□□□□ -0.36
HLA-F-221ENST00000444621 PIBF1Q8WXW3 757 aa12.8□□□□□ -0.36
HLA-F-221ENST00000444621 LENG1Q96BZ8 264 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms