RNA–Protein interactions for RNA: ENST00000443740.5

CARF-215, Transcript of calcium responsive transcription factor, human

TSL 3

Gene CARF, Length 597 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CARF-215	ENST00000443740	VWCE	Q96DN2	955 aa		4.27	□□□□□ -1.73
CARF-215	ENST00000443740	KREMEN1	Q96MU8	473 aa		4.27	□□□□□ -1.73
CARF-215	ENST00000443740	BCL2L13	Q9BXK5	485 aa		4.27	□□□□□ -1.73
CARF-215	ENST00000443740	LRRC3	Q9BY71	257 aa		4.27	□□□□□ -1.73
CARF-215	ENST00000443740	DUSP13	Q9UII6	198 aa		4.27	□□□□□ -1.73
CARF-215	ENST00000443740	CACNA1G	O43497	2377 aa		4.27	□□□□□ -1.73
CARF-215	ENST00000443740	RGPD8	O14715	1765 aa	Predicted RBP	4.27	□□□□□ -1.73
CARF-215	ENST00000443740	COL18A1	P39060	1754 aa		4.27	□□□□□ -1.73
CARF-215	ENST00000443740	TIAM2	Q8IVF5	1701 aa		4.26	□□□□□ -1.73
CARF-215	ENST00000443740	TRPM3	Q9HCF6	1732 aa	Predicted RBP	4.26	□□□□□ -1.73
CARF-215	ENST00000443740	SLC22A31	A6NKX4	558 aa		4.26	□□□□□ -1.73
CARF-215	ENST00000443740	RGS13	O14921	159 aa		4.26	□□□□□ -1.73
CARF-215	ENST00000443740	TLR3	O15455	904 aa	Known RBP	4.26	□□□□□ -1.73
CARF-215	ENST00000443740	HPX	P02790	462 aa		4.26	□□□□□ -1.73
CARF-215	ENST00000443740	RAC2	P15153	192 aa		4.26	□□□□□ -1.73
CARF-215	ENST00000443740	TNNI2	P48788	182 aa		4.26	□□□□□ -1.73
CARF-215	ENST00000443740	ERVFC1	P60507	584 aa		4.26	□□□□□ -1.73
CARF-215	ENST00000443740	ZNF326	Q5BKZ1	582 aa	Known RBP	4.26	□□□□□ -1.73
CARF-215	ENST00000443740	LILRA6	Q6PI73	481 aa		4.26	□□□□□ -1.73
CARF-215	ENST00000443740	MPZL3	Q6UWV2	235 aa		4.26	□□□□□ -1.73
CARF-215	ENST00000443740	CILP2	Q8IUL8	1156 aa		4.26	□□□□□ -1.73
CARF-215	ENST00000443740	ABHD4	Q8TB40	342 aa		4.26	□□□□□ -1.73
CARF-215	ENST00000443740	GIPC2	Q8TF65	315 aa		4.26	□□□□□ -1.73
CARF-215	ENST00000443740	KIF2C	Q99661	725 aa		4.26	□□□□□ -1.73
CARF-215	ENST00000443740	HIRIP3	Q9BW71	556 aa	Predicted RBP	4.26	□□□□□ -1.73
CARF-215	ENST00000443740	ASPN	Q9BXN1	380 aa		4.26	□□□□□ -1.73
CARF-215	ENST00000443740	ADAMTS10	Q9H324	1103 aa		4.26	□□□□□ -1.73
CARF-215	ENST00000443740	BRMS1	Q9HCU9	246 aa		4.26	□□□□□ -1.73
CARF-215	ENST00000443740	SUPT16H	Q9Y5B9	1047 aa	Known RBP	4.26	□□□□□ -1.73
CARF-215	ENST00000443740	NAIP	Q13075	1403 aa		4.26	□□□□□ -1.73
CARF-215	ENST00000443740	ERBIN	Q96RT1	1412 aa		4.26	□□□□□ -1.73
CARF-215	ENST00000443740	BRCA1	P38398	1863 aa	Known RBP	4.26	□□□□□ -1.73
CARF-215	ENST00000443740	KIAA0232	Q92628	1395 aa		4.26	□□□□□ -1.73
CARF-215	ENST00000443740	NCAN	O14594	1321 aa		4.25	□□□□□ -1.73
CARF-215	ENST00000443740	PASK	Q96RG2	1323 aa		4.25	□□□□□ -1.73
CARF-215	ENST00000443740	SHISA3	A0PJX4	238 aa		4.25	□□□□□ -1.73
CARF-215	ENST00000443740	ATE1	O95260	518 aa		4.25	□□□□□ -1.73
CARF-215	ENST00000443740	ZGLP1	P0C6A0	271 aa		4.25	□□□□□ -1.73
CARF-215	ENST00000443740	ECE1	P42892	770 aa		4.25	□□□□□ -1.73
CARF-215	ENST00000443740	CRK	P46108	304 aa		4.25	□□□□□ -1.73
CARF-215	ENST00000443740	HK2	P52789	917 aa		4.25	□□□□□ -1.73
CARF-215	ENST00000443740	EGR3	Q06889	387 aa		4.25	□□□□□ -1.73
CARF-215	ENST00000443740	ITSN1	Q15811	1721 aa		4.25	□□□□□ -1.73
CARF-215	ENST00000443740	CHRNA2	Q15822	529 aa		4.25	□□□□□ -1.73
CARF-215	ENST00000443740	CWF19L2	Q2TBE0	894 aa	Known RBP	4.25	□□□□□ -1.73
CARF-215	ENST00000443740	HS2ST1	Q7LGA3	356 aa		4.25	□□□□□ -1.73
CARF-215	ENST00000443740	PHACTR4	Q8IZ21	702 aa		4.25	□□□□□ -1.73
CARF-215	ENST00000443740	ZNF296	Q8WUU4	475 aa	Predicted RBP	4.25	□□□□□ -1.73
CARF-215	ENST00000443740	SP110	Q9HB58	689 aa		4.25	□□□□□ -1.73
CARF-215	ENST00000443740	KIAA1551	Q9HCM1	1747 aa		4.25	□□□□□ -1.73
CARF-215	ENST00000443740	ADAMTS1	Q9UHI8	967 aa		4.25	□□□□□ -1.73
CARF-215	ENST00000443740	PCDHB14	Q9Y5E9	798 aa		4.25	□□□□□ -1.73
CARF-215	ENST00000443740	PCDHA11	Q9Y5I1	949 aa		4.25	□□□□□ -1.73
CARF-215	ENST00000443740	KIF13B	Q9NQT8	1826 aa		4.25	□□□□□ -1.73
CARF-215	ENST00000443740	ANKRD30B	Q9BXX2	1392 aa		4.25	□□□□□ -1.73
CARF-215	ENST00000443740	PIEZO1	Q92508	2521 aa		4.25	□□□□□ -1.73
CARF-215	ENST00000443740	CLTCL1	P53675	1640 aa		4.24	□□□□□ -1.73
CARF-215	ENST00000443740	NRXN1	Q9ULB1	1477 aa		4.24	□□□□□ -1.73
CARF-215	ENST00000443740	IFT172	Q9UG01	1749 aa		4.24	□□□□□ -1.73
CARF-215	ENST00000443740	CASKIN1	Q8WXD9	1431 aa		4.24	□□□□□ -1.73
CARF-215	ENST00000443740	RBM47	A0AV96	593 aa	Known RBP	4.24	□□□□□ -1.73
CARF-215	ENST00000443740	GLTPD2	A6NH11	291 aa		4.24	□□□□□ -1.73
CARF-215	ENST00000443740	PRRG2	O14669	202 aa		4.24	□□□□□ -1.73
CARF-215	ENST00000443740	UBOX5	O94941	541 aa		4.24	□□□□□ -1.73
CARF-215	ENST00000443740	CFP	P27918	469 aa		4.24	□□□□□ -1.73
CARF-215	ENST00000443740	GBP1	P32455	592 aa		4.24	□□□□□ -1.73
CARF-215	ENST00000443740	ARSH	Q5FYA8	562 aa		4.24	□□□□□ -1.73
CARF-215	ENST00000443740	PDZD8	Q8NEN9	1154 aa		4.24	□□□□□ -1.73
CARF-215	ENST00000443740	MYLIP	Q8WY64	445 aa		4.24	□□□□□ -1.73
CARF-215	ENST00000443740	NSUN3	Q9H649	340 aa	Known RBP	4.24	□□□□□ -1.73
CARF-215	ENST00000443740	GGT7	Q9UJ14	662 aa		4.24	□□□□□ -1.73
CARF-215	ENST00000443740	ABT1	Q9ULW3	272 aa	Known RBP	4.24	□□□□□ -1.73
CARF-215	ENST00000443740	QRICH2	Q9H0J4	1663 aa		4.24	□□□□□ -1.73
CARF-215	ENST00000443740	CEP290	O15078	2479 aa		4.24	□□□□□ -1.73
CARF-215	ENST00000443740		B8ZZF3	427 aa		4.23	□□□□□ -1.73
CARF-215	ENST00000443740	TSPAN15	O95858	294 aa		4.23	□□□□□ -1.73
CARF-215	ENST00000443740	KRT1	P04264	644 aa		4.23	□□□□□ -1.73
CARF-215	ENST00000443740	RAG1	P15918	1043 aa		4.23	□□□□□ -1.73
CARF-215	ENST00000443740	RAP1GAP	P47736	663 aa		4.23	□□□□□ -1.73
CARF-215	ENST00000443740	GRM1	Q13255	1194 aa		4.23	□□□□□ -1.73
CARF-215	ENST00000443740	LDLRAD1	Q5T700	205 aa		4.23	□□□□□ -1.73
CARF-215	ENST00000443740	CDCP2	Q5VXM1	449 aa		4.23	□□□□□ -1.73
CARF-215	ENST00000443740	OVOS1	Q6IE37	1185 aa		4.23	□□□□□ -1.73
CARF-215	ENST00000443740	LCNL1	Q6ZST4	164 aa		4.23	□□□□□ -1.73
CARF-215	ENST00000443740	SYDE1	Q6ZW31	735 aa	Predicted RBP	4.23	□□□□□ -1.73
CARF-215	ENST00000443740	COL23A1	Q86Y22	540 aa	Predicted RBP	4.23	□□□□□ -1.73
CARF-215	ENST00000443740	C1QL4	Q86Z23	238 aa		4.23	□□□□□ -1.73
CARF-215	ENST00000443740	MARCH10	Q8NA82	808 aa	Predicted RBP	4.23	□□□□□ -1.73
CARF-215	ENST00000443740	FBXO15	Q8NCQ5	510 aa	Predicted RBP	4.23	□□□□□ -1.73
CARF-215	ENST00000443740	CAPNS2	Q96L46	248 aa		4.23	□□□□□ -1.73
CARF-215	ENST00000443740	TOX2	Q96NM4	488 aa		4.23	□□□□□ -1.73
CARF-215	ENST00000443740	GPR101	Q96P66	508 aa	Predicted RBP	4.23	□□□□□ -1.73
CARF-215	ENST00000443740	PPP1R16B	Q96T49	567 aa		4.23	□□□□□ -1.73
CARF-215	ENST00000443740	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
CARF-215	ENST00000443740	EHMT1	Q9H9B1	1298 aa		4.23	□□□□□ -1.73
CARF-215	ENST00000443740	UBP1	Q9NZI7	540 aa		4.23	□□□□□ -1.73
CARF-215	ENST00000443740	GMIP	Q9P107	970 aa		4.23	□□□□□ -1.73
CARF-215	ENST00000443740	ZNF281	Q9Y2X9	895 aa		4.23	□□□□□ -1.73
CARF-215	ENST00000443740		A0A0C4DFX4	3053 aa		4.23	□□□□□ -1.73
CARF-215	ENST00000443740	USP54	Q70EL1	1684 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms