RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 NKRFO15226 690 aaKnown RBP eCLIP23.29■■□□□ 1.32
LRCH3-208ENST00000443727 PPP1R11O60927 126 aaPredicted RBP23.29■■□□□ 1.32
LRCH3-208ENST00000443727 TXNP10599 105 aaKnown RBP23.29■■□□□ 1.32
LRCH3-208ENST00000443727 KIF5BP33176 963 aa23.29■■□□□ 1.32
LRCH3-208ENST00000443727 ITGA7Q13683 1181 aa23.29■■□□□ 1.32
LRCH3-208ENST00000443727 NECTIN1Q15223 517 aa23.29■■□□□ 1.32
LRCH3-208ENST00000443727 STXBP2Q15833 593 aa23.29■■□□□ 1.32
LRCH3-208ENST00000443727 PIBF1Q8WXW3 757 aa23.29■■□□□ 1.32
LRCH3-208ENST00000443727 TMEM87BQ96K49 555 aa23.29■■□□□ 1.32
LRCH3-208ENST00000443727 IWS1Q96ST2 819 aa23.29■■□□□ 1.32
LRCH3-208ENST00000443727 RIOX1Q9H6W3 641 aa23.29■■□□□ 1.32
LRCH3-208ENST00000443727 GPHNQ9NQX3 736 aaPredicted RBP23.29■■□□□ 1.32
LRCH3-208ENST00000443727 PNMA6FA0A0J9YX94 578 aa23.28■■□□□ 1.32
LRCH3-208ENST00000443727 DDAH1O94760 285 aa23.28■■□□□ 1.32
LRCH3-208ENST00000443727 MYL3P08590 195 aa23.28■■□□□ 1.32
LRCH3-208ENST00000443727 EIF2AK2P19525 551 aaKnown RBP23.28■■□□□ 1.32
LRCH3-208ENST00000443727 ITGB8P26012 769 aa23.28■■□□□ 1.32
LRCH3-208ENST00000443727 SEPT14Q6ZU15 432 aa23.28■■□□□ 1.32
LRCH3-208ENST00000443727 MYL10Q9BUA6 226 aa23.28■■□□□ 1.32
LRCH3-208ENST00000443727 POLR3EQ9NVU0 708 aa23.28■■□□□ 1.32
LRCH3-208ENST00000443727 MYH6P13533 1939 aa23.27■■□□□ 1.32
LRCH3-208ENST00000443727 LTBP2Q14767 1821 aa23.27■■□□□ 1.32
LRCH3-208ENST00000443727 SH2B2O14492 632 aaPredicted RBP23.27■■□□□ 1.32
LRCH3-208ENST00000443727 FPGSQ05932 587 aa23.27■■□□□ 1.32
LRCH3-208ENST00000443727 SHHQ15465 462 aa23.27■■□□□ 1.32
LRCH3-208ENST00000443727 SLC35G1Q2M3R5 365 aa23.27■■□□□ 1.32
LRCH3-208ENST00000443727 MAP3K14Q99558 947 aa23.27■■□□□ 1.32
LRCH3-208ENST00000443727 SEZ6LQ9BYH1 1024 aa23.27■■□□□ 1.32
LRCH3-208ENST00000443727 TBX21Q9UL17 535 aa23.27■■□□□ 1.32
LRCH3-208ENST00000443727 LAMA3Q16787 3333 aa23.26■■□□□ 1.31
LRCH3-208ENST00000443727 CYTH3O43739 400 aa23.26■■□□□ 1.31
LRCH3-208ENST00000443727 TIMP1P01033 207 aa23.26■■□□□ 1.31
LRCH3-208ENST00000443727 HOXA13P31271 388 aaPredicted RBP23.26■■□□□ 1.31
LRCH3-208ENST00000443727 HSD17B4P51659 736 aa23.26■■□□□ 1.31
LRCH3-208ENST00000443727 PSMC6P62333 389 aa23.26■■□□□ 1.31
LRCH3-208ENST00000443727 FAM126BQ8IXS8 530 aa23.26■■□□□ 1.31
LRCH3-208ENST00000443727 COPS5Q92905 334 aa23.26■■□□□ 1.31
LRCH3-208ENST00000443727 LZTS2Q9BRK4 669 aa23.26■■□□□ 1.31
LRCH3-208ENST00000443727 PXMP2Q9NR77 195 aa23.26■■□□□ 1.31
LRCH3-208ENST00000443727 MAP3K20Q9NYL2 800 aaKnown RBP23.26■■□□□ 1.31
LRCH3-208ENST00000443727 SZT2Q5T011 3432 aa23.25■■□□□ 1.31
LRCH3-208ENST00000443727 GCOM1H8Y6P7 765 aaPredicted RBP23.25■■□□□ 1.31
LRCH3-208ENST00000443727 OPLAHO14841 1288 aa23.25■■□□□ 1.31
LRCH3-208ENST00000443727 NR3C2P08235 984 aa23.25■■□□□ 1.31
LRCH3-208ENST00000443727 POLR2MP0CAP2 368 aa23.25■■□□□ 1.31
LRCH3-208ENST00000443727 GNAQP50148 359 aa23.25■■□□□ 1.31
LRCH3-208ENST00000443727 C9orf50Q5SZB4 431 aa23.25■■□□□ 1.31
LRCH3-208ENST00000443727 GPR153Q6NV75 609 aa23.25■■□□□ 1.31
LRCH3-208ENST00000443727 SAMD3Q8N6K7 520 aa23.25■■□□□ 1.31
LRCH3-208ENST00000443727 RRP36Q96EU6 259 aaKnown RBP23.25■■□□□ 1.31
LRCH3-208ENST00000443727 MTG1Q9BT17 334 aaPredicted RBP23.25■■□□□ 1.31
LRCH3-208ENST00000443727 SLC12A7Q9Y666 1083 aa23.25■■□□□ 1.31
LRCH3-208ENST00000443727 EIF3JO75822 258 aaKnown RBP23.24■■□□□ 1.31
LRCH3-208ENST00000443727 CALM1P0DP23 149 aa23.24■■□□□ 1.31
LRCH3-208ENST00000443727 CALM2P0DP24 149 aa23.24■■□□□ 1.31
LRCH3-208ENST00000443727 CALM3P0DP25 149 aa23.24■■□□□ 1.31
LRCH3-208ENST00000443727 MYCLP12524 364 aaPredicted RBP23.24■■□□□ 1.31
LRCH3-208ENST00000443727 LIFRP42702 1097 aa23.24■■□□□ 1.31
LRCH3-208ENST00000443727 SLC43A3Q8NBI5 491 aa23.24■■□□□ 1.31
LRCH3-208ENST00000443727 LRRC2Q9BYS8 371 aa23.24■■□□□ 1.31
LRCH3-208ENST00000443727 PPP1R12CQ9BZL4 782 aa23.24■■□□□ 1.31
LRCH3-208ENST00000443727 SEC63Q9UGP8 760 aaKnown RBP23.24■■□□□ 1.31
LRCH3-208ENST00000443727 KPNA6O60684 536 aa23.23■■□□□ 1.31
LRCH3-208ENST00000443727 ARIH2O95376 493 aa23.23■■□□□ 1.31
LRCH3-208ENST00000443727 PURAQ00577 322 aaKnown RBP23.23■■□□□ 1.31
LRCH3-208ENST00000443727 GHRHRQ02643 423 aa23.23■■□□□ 1.31
LRCH3-208ENST00000443727 SYNE3Q6ZMZ3 975 aa23.23■■□□□ 1.31
LRCH3-208ENST00000443727 FCHSD1Q86WN1 690 aa23.23■■□□□ 1.31
LRCH3-208ENST00000443727 DEFB123Q8N688 67 aa23.23■■□□□ 1.31
LRCH3-208ENST00000443727 NEK1Q96PY6 1258 aa23.23■■□□□ 1.31
LRCH3-208ENST00000443727 SPZ1Q9BXG8 430 aa23.23■■□□□ 1.31
LRCH3-208ENST00000443727 GRIN2DO15399 1336 aa23.23■■□□□ 1.31
LRCH3-208ENST00000443727 A6NJR5 290 aa23.22■■□□□ 1.31
LRCH3-208ENST00000443727 GH1P01241 217 aa23.22■■□□□ 1.31
LRCH3-208ENST00000443727 CD4P01730 458 aa23.22■■□□□ 1.31
LRCH3-208ENST00000443727 RXRAP19793 462 aa23.22■■□□□ 1.31
LRCH3-208ENST00000443727 LY6KQ17RY6 165 aa23.22■■□□□ 1.31
LRCH3-208ENST00000443727 MFSD5Q6N075 450 aa23.22■■□□□ 1.31
LRCH3-208ENST00000443727 CCDC62Q6P9F0 684 aa23.22■■□□□ 1.31
LRCH3-208ENST00000443727 TMEM199Q8N511 208 aa23.22■■□□□ 1.31
LRCH3-208ENST00000443727 RNPC3Q96LT9 517 aaKnown RBP23.22■■□□□ 1.31
LRCH3-208ENST00000443727 TRPV6Q9H1D0 765 aa23.22■■□□□ 1.31
LRCH3-208ENST00000443727 MRVI1Q9Y6F6 885 aa23.22■■□□□ 1.31
LRCH3-208ENST00000443727 BAZ2BQ9UIF8 2168 aaKnown RBP23.21■■□□□ 1.31
LRCH3-208ENST00000443727 SMARCA1P28370 1054 aa23.21■■□□□ 1.31
LRCH3-208ENST00000443727 EPHB4P54760 987 aa23.21■■□□□ 1.31
LRCH3-208ENST00000443727 CHMP4BP1P59074 171 aa23.21■■□□□ 1.31
LRCH3-208ENST00000443727 PPIGQ13427 754 aaKnown RBP eCLIP23.21■■□□□ 1.31
LRCH3-208ENST00000443727 COL9A3Q14050 684 aaPredicted RBP23.21■■□□□ 1.31
LRCH3-208ENST00000443727 FAM47CQ5HY64 1035 aa23.21■■□□□ 1.31
LRCH3-208ENST00000443727 RAB11FIP4Q86YS3 637 aa23.21■■□□□ 1.31
LRCH3-208ENST00000443727 PDCD2LQ9BRP1 358 aa23.21■■□□□ 1.31
LRCH3-208ENST00000443727 PLEKHA8P1O95397 391 aa23.2■■□□□ 1.3
LRCH3-208ENST00000443727 KRT32Q14532 448 aa23.2■■□□□ 1.3
LRCH3-208ENST00000443727 Q7L0L9 218 aa23.2■■□□□ 1.3
LRCH3-208ENST00000443727 AFG1LQ8WV93 481 aa23.2■■□□□ 1.3
LRCH3-208ENST00000443727 ALDH8A1Q9H2A2 487 aaPredicted RBP23.2■■□□□ 1.3
LRCH3-208ENST00000443727 HIPK3Q9H422 1215 aa23.2■■□□□ 1.3
LRCH3-208ENST00000443727 B4GALT4O60513 344 aa23.19■■□□□ 1.3
LRCH3-208ENST00000443727 CCND2P30279 289 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms