RNA–Protein interactions for RNA: ENST00000443438.5

RER1-205, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 540 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-205ENST00000443438 TPM3P06753 285 aa9.66□□□□□ -0.86
RER1-205ENST00000443438 PTGS1P23219 599 aa9.66□□□□□ -0.86
RER1-205ENST00000443438 ARHGAP4P98171 946 aa9.66□□□□□ -0.86
RER1-205ENST00000443438 FANCCQ00597 558 aa9.66□□□□□ -0.86
RER1-205ENST00000443438 IKQ13123 557 aaPredicted RBP9.66□□□□□ -0.86
RER1-205ENST00000443438 DGKZQ13574 1117 aa9.66□□□□□ -0.86
RER1-205ENST00000443438 ZYXQ15942 572 aaKnown RBP9.66□□□□□ -0.86
RER1-205ENST00000443438 HYIQ5T013 277 aa9.66□□□□□ -0.86
RER1-205ENST00000443438 CCDC174Q6PII3 467 aa9.66□□□□□ -0.86
RER1-205ENST00000443438 CCDC186Q7Z3E2 898 aa9.66□□□□□ -0.86
RER1-205ENST00000443438 APOBEC3FQ8IUX4 373 aaKnown RBP9.66□□□□□ -0.86
RER1-205ENST00000443438 ETNPPLQ8TBG4 499 aa9.66□□□□□ -0.86
RER1-205ENST00000443438 GJA10Q969M2 543 aa9.66□□□□□ -0.86
RER1-205ENST00000443438 KIFC2Q96AC6 838 aa9.66□□□□□ -0.86
RER1-205ENST00000443438 C7orf25Q9BPX7 421 aa9.66□□□□□ -0.86
RER1-205ENST00000443438 XPO4Q9C0E2 1151 aaKnown RBP9.66□□□□□ -0.86
RER1-205ENST00000443438 MAGEF1Q9HAY2 307 aa9.66□□□□□ -0.86
RER1-205ENST00000443438 RTN4Q9NQC3 1192 aaKnown RBP9.66□□□□□ -0.86
RER1-205ENST00000443438 IFNKQ9P0W0 207 aa9.66□□□□□ -0.86
RER1-205ENST00000443438 LRWD1Q9UFC0 647 aa9.66□□□□□ -0.86
RER1-205ENST00000443438 DACH1Q9UI36 760 aa9.66□□□□□ -0.86
RER1-205ENST00000443438 DICER1Q9UPY3 1922 aaKnown RBP9.66□□□□□ -0.86
RER1-205ENST00000443438 LMOD1P29536 600 aaPredicted RBP9.65□□□□□ -0.86
RER1-205ENST00000443438 HOXA13P31271 388 aaPredicted RBP9.65□□□□□ -0.86
RER1-205ENST00000443438 GHRHRQ02643 423 aa9.65□□□□□ -0.86
RER1-205ENST00000443438 SPIRE1Q08AE8 756 aa9.65□□□□□ -0.86
RER1-205ENST00000443438 TRAF1Q13077 416 aa9.65□□□□□ -0.86
RER1-205ENST00000443438 SEMA3FQ13275 785 aa9.65□□□□□ -0.86
RER1-205ENST00000443438 KCNB1Q14721 858 aa9.65□□□□□ -0.86
RER1-205ENST00000443438 ECM1Q16610 540 aa9.65□□□□□ -0.86
RER1-205ENST00000443438 ZNF658Q5TYW1 1059 aaPredicted RBP9.65□□□□□ -0.86
RER1-205ENST00000443438 PRAMEF18Q5VWM3 479 aa9.65□□□□□ -0.86
RER1-205ENST00000443438 SPATA1Q5VX52 437 aa9.65□□□□□ -0.86
RER1-205ENST00000443438 DCAF15Q66K64 600 aa9.65□□□□□ -0.86
RER1-205ENST00000443438 APTXQ7Z2E3 356 aaKnown RBP9.65□□□□□ -0.86
RER1-205ENST00000443438 KCNK18Q7Z418 384 aa9.65□□□□□ -0.86
RER1-205ENST00000443438 LDHDQ86WU2 507 aa9.65□□□□□ -0.86
RER1-205ENST00000443438 TRMT44Q8IYL2 757 aaKnown RBP9.65□□□□□ -0.86
RER1-205ENST00000443438 SMYD4Q8IYR2 804 aaPredicted RBP9.65□□□□□ -0.86
RER1-205ENST00000443438 SCYL3Q8IZE3 742 aa9.65□□□□□ -0.86
RER1-205ENST00000443438 CLEC4DQ8WXI8 215 aa9.65□□□□□ -0.86
RER1-205ENST00000443438 LPAR1Q92633 364 aa9.65□□□□□ -0.86
RER1-205ENST00000443438 SYT17Q9BSW7 474 aa9.65□□□□□ -0.86
RER1-205ENST00000443438 INTS13Q9NVM9 706 aa9.65□□□□□ -0.86
RER1-205ENST00000443438 PPP2R3BQ9Y5P8 575 aa9.65□□□□□ -0.86
RER1-205ENST00000443438 ATAD5Q96QE3 1844 aa9.65□□□□□ -0.86
RER1-205ENST00000443438 ABCB11O95342 1321 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 IGLV3-22A0A075B6J6 115 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 POTEMA6NI47 508 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 GOLGA6L6A8MZA4 724 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 FAM86B1E9PN63 330 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 TBX3O15119 743 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 SLC26A4O43511 780 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 DDNO94850 711 aaPredicted RBP9.64□□□□□ -0.87
RER1-205ENST00000443438 RHOBTB3O94955 611 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 ICAM1P05362 532 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 FAM86B2P0C5J1 330 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 YBX3P16989 372 aaKnown RBP eCLIP9.64□□□□□ -0.874e-10■■□□□ 11.6
RER1-205ENST00000443438 PTPRAP18433 802 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 TPM4P67936 248 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 ARID5BQ14865 1188 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 TMEM266Q2M3C6 531 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 KMT5BQ4FZB7 885 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 NOL9Q5SY16 702 aaKnown RBP9.64□□□□□ -0.87
RER1-205ENST00000443438 CDKAL1Q5VV42 579 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 CNNM4Q6P4Q7 775 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 ADSSL1Q8N142 457 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 GIMAP8Q8ND71 665 aaPredicted RBP9.64□□□□□ -0.87
RER1-205ENST00000443438 CACTINQ8WUQ7 758 aaKnown RBP9.64□□□□□ -0.87
RER1-205ENST00000443438 RAD54LQ92698 747 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 KLRG1Q96E93 195 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 CALML4Q96GE6 196 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 AGBL1Q96MI9 1066 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 NAP1L5Q96NT1 182 aaPredicted RBP9.64□□□□□ -0.87
RER1-205ENST00000443438 SLF1Q9BQI6 1058 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 TRIM9Q9C026 710 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 SAMSN1Q9NSI8 373 aaKnown RBP9.64□□□□□ -0.87
RER1-205ENST00000443438 RMND1Q9NWS8 449 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 GGA3Q9NZ52 723 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 STK17AQ9UEE5 414 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 PYCARDQ9ULZ3 195 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 FZD1Q9UP38 647 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 GDAQ9Y2T3 454 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 MRPL11Q9Y3B7 192 aaKnown RBP9.64□□□□□ -0.87
RER1-205ENST00000443438 NFE2L3Q9Y4A8 694 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 MYH7BA7E2Y1 1941 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 SBF1O95248 1867 aa9.64□□□□□ -0.87
RER1-205ENST00000443438 RPTORQ8N122 1335 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 PITPNM2Q9BZ72 1349 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 MYMKA6NI61 221 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 SPDYE3A6NKU9 549 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 GCOM1H8Y6P7 765 aaPredicted RBP9.63□□□□□ -0.87
RER1-205ENST00000443438 MSH4O15457 936 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 USP2O75604 605 aaPredicted RBP9.63□□□□□ -0.87
RER1-205ENST00000443438 POLR2MP0CAP2 368 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 VCAM1P19320 739 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 MSNP26038 577 aaKnown RBP9.63□□□□□ -0.87
RER1-205ENST00000443438 PRCPP42785 496 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 HSD17B4P51659 736 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 BACE1P56817 501 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms