RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 MYL3P08590 195 aa16.15■□□□□ 0.18
PTPRE-203ENST00000442830 CCL23P55773 120 aa16.15■□□□□ 0.18
PTPRE-203ENST00000442830 PSMC6P62333 389 aa16.15■□□□□ 0.18
PTPRE-203ENST00000442830 BFSP2Q13515 415 aa16.15■□□□□ 0.18
PTPRE-203ENST00000442830 OTOP2Q7RTS6 562 aa16.15■□□□□ 0.18
PTPRE-203ENST00000442830 TBC1D10CQ8IV04 446 aa16.15■□□□□ 0.18
PTPRE-203ENST00000442830 RETREG2Q8NC44 543 aa16.15■□□□□ 0.18
PTPRE-203ENST00000442830 PNMA1Q8ND90 353 aa16.15■□□□□ 0.18
PTPRE-203ENST00000442830 IWS1Q96ST2 819 aa16.15■□□□□ 0.18
PTPRE-203ENST00000442830 WNT8AQ9H1J5 351 aa16.15■□□□□ 0.18
PTPRE-203ENST00000442830 ZBBXA8MT70 800 aa16.14■□□□□ 0.17
PTPRE-203ENST00000442830 PARNO95453 639 aaKnown RBP16.14■□□□□ 0.17
PTPRE-203ENST00000442830 TXNP10599 105 aaKnown RBP16.14■□□□□ 0.17
PTPRE-203ENST00000442830 KCNA4P22459 653 aa16.14■□□□□ 0.17
PTPRE-203ENST00000442830 PBX2P40425 430 aa16.14■□□□□ 0.17
PTPRE-203ENST00000442830 TRAF1Q13077 416 aa16.14■□□□□ 0.17
PTPRE-203ENST00000442830 IMMTQ16891 758 aaKnown RBP16.14■□□□□ 0.17
PTPRE-203ENST00000442830 CHD1LQ86WJ1 897 aa16.14■□□□□ 0.17
PTPRE-203ENST00000442830 NSUN6Q8TEA1 469 aaKnown RBP16.14■□□□□ 0.17
PTPRE-203ENST00000442830 ANKS1AQ92625 1134 aa16.14■□□□□ 0.17
PTPRE-203ENST00000442830 SLC9A7Q96T83 725 aa16.14■□□□□ 0.17
PTPRE-203ENST00000442830 DSCC1Q9BVC3 393 aa16.14■□□□□ 0.17
PTPRE-203ENST00000442830 KRT23Q9C075 422 aa16.14■□□□□ 0.17
PTPRE-203ENST00000442830 PRDM12Q9H4Q4 367 aa16.14■□□□□ 0.17
PTPRE-203ENST00000442830 THEGQ9P2T0 379 aa16.14■□□□□ 0.17
PTPRE-203ENST00000442830 NOD1Q9Y239 953 aa16.14■□□□□ 0.17
PTPRE-203ENST00000442830 MRPL11Q9Y3B7 192 aaKnown RBP16.14■□□□□ 0.17
PTPRE-203ENST00000442830 GRXCR1A8MXD5 290 aa16.13■□□□□ 0.17
PTPRE-203ENST00000442830 ATP2A2P16615 1042 aaKnown RBP16.13■□□□□ 0.17
PTPRE-203ENST00000442830 CDC37Q16543 378 aaPredicted RBP16.13■□□□□ 0.17
PTPRE-203ENST00000442830 NBPF20Q3BBV1 942 aa16.13■□□□□ 0.17
PTPRE-203ENST00000442830 USH1GQ495M9 461 aa16.13■□□□□ 0.17
PTPRE-203ENST00000442830 FAM47CQ5HY64 1035 aa16.13■□□□□ 0.17
PTPRE-203ENST00000442830 SAMD3Q8N6K7 520 aa16.13■□□□□ 0.17
PTPRE-203ENST00000442830 IL27Q8NEV9 243 aa16.13■□□□□ 0.17
PTPRE-203ENST00000442830 CAGE1Q8TC20 777 aa16.13■□□□□ 0.17
PTPRE-203ENST00000442830 PHOSPHO2Q8TCD6 241 aa16.13■□□□□ 0.17
PTPRE-203ENST00000442830 PURBQ96QR8 312 aaKnown RBP16.13■□□□□ 0.17
PTPRE-203ENST00000442830 MAP3K20Q9NYL2 800 aaKnown RBP16.13■□□□□ 0.17
PTPRE-203ENST00000442830 CXXC1Q9P0U4 656 aaPredicted RBP16.13■□□□□ 0.17
PTPRE-203ENST00000442830 NEDD4P46934 1319 aa16.13■□□□□ 0.17
PTPRE-203ENST00000442830 UMODL1Q5DID0 1318 aa16.13■□□□□ 0.17
PTPRE-203ENST00000442830 GH1P01241 217 aa16.12■□□□□ 0.17
PTPRE-203ENST00000442830 PARP1P09874 1014 aaKnown RBP16.12■□□□□ 0.17
PTPRE-203ENST00000442830 STXBP2Q15833 593 aa16.12■□□□□ 0.17
PTPRE-203ENST00000442830 PPP2R2DQ66LE6 453 aa16.12■□□□□ 0.17
PTPRE-203ENST00000442830 ZSCAN10Q96SZ4 725 aaPredicted RBP16.12■□□□□ 0.17
PTPRE-203ENST00000442830 UBAC1Q9BSL1 405 aa16.12■□□□□ 0.17
PTPRE-203ENST00000442830 KATNAL1Q9BW62 490 aa16.12■□□□□ 0.17
PTPRE-203ENST00000442830 NKX2-4Q9H2Z4 354 aa16.12■□□□□ 0.17
PTPRE-203ENST00000442830 TRMT13Q9NUP7 481 aaKnown RBP16.12■□□□□ 0.17
PTPRE-203ENST00000442830 DDX49Q9Y6V7 483 aaKnown RBP16.12■□□□□ 0.17
PTPRE-203ENST00000442830 SCN5AQ14524 2016 aa16.12■□□□□ 0.17
PTPRE-203ENST00000442830 TRIP12Q14669 1992 aaPredicted RBP16.11■□□□□ 0.17
PTPRE-203ENST00000442830 SPTBN5Q9NRC6 3674 aaKnown RBP16.11■□□□□ 0.17
PTPRE-203ENST00000442830 CHD9Q3L8U1 2897 aa16.11■□□□□ 0.17
PTPRE-203ENST00000442830 KIF28PB7ZC32 967 aa16.11■□□□□ 0.17
PTPRE-203ENST00000442830 KDM4AO75164 1064 aa16.11■□□□□ 0.17
PTPRE-203ENST00000442830 BAIAP3O94812 1187 aa16.11■□□□□ 0.17
PTPRE-203ENST00000442830 CASTP20810 708 aaKnown RBP16.11■□□□□ 0.17
PTPRE-203ENST00000442830 NUCB1Q02818 461 aa16.11■□□□□ 0.17
PTPRE-203ENST00000442830 TMEM67Q5HYA8 995 aa16.11■□□□□ 0.17
PTPRE-203ENST00000442830 CWC27Q6UX04 472 aaKnown RBP16.11■□□□□ 0.17
PTPRE-203ENST00000442830 SESTD1Q86VW0 696 aa16.11■□□□□ 0.17
PTPRE-203ENST00000442830 FBXO11Q86XK2 927 aa16.11■□□□□ 0.17
PTPRE-203ENST00000442830 PLEKHM2Q8IWE5 1019 aa16.11■□□□□ 0.17
PTPRE-203ENST00000442830 SCLYQ96I15 445 aa16.11■□□□□ 0.17
PTPRE-203ENST00000442830 DHX16O60231 1041 aaKnown RBP16.1■□□□□ 0.17
PTPRE-203ENST00000442830 CYP2C9P11712 490 aa16.1■□□□□ 0.17
PTPRE-203ENST00000442830 IGFBP4P22692 258 aa16.1■□□□□ 0.17
PTPRE-203ENST00000442830 MRPS5P82675 430 aaKnown RBP16.1■□□□□ 0.17
PTPRE-203ENST00000442830 AAK1Q2M2I8 961 aa16.1■□□□□ 0.17
PTPRE-203ENST00000442830 TMEM63BQ5T3F8 832 aa16.1■□□□□ 0.17
PTPRE-203ENST00000442830 KCNV1Q6PIU1 500 aa16.1■□□□□ 0.17
PTPRE-203ENST00000442830 ADGRF4Q8IZF3 695 aa16.1■□□□□ 0.17
PTPRE-203ENST00000442830 USP38Q8NB14 1042 aa16.1■□□□□ 0.17
PTPRE-203ENST00000442830 AFAP1L1Q8TED9 768 aa16.1■□□□□ 0.17
PTPRE-203ENST00000442830 EMID1Q96A84 441 aaPredicted RBP16.1■□□□□ 0.17
PTPRE-203ENST00000442830 RMDN3Q96TC7 470 aa16.1■□□□□ 0.17
PTPRE-203ENST00000442830 PRDM6Q9NQX0 595 aa16.1■□□□□ 0.17
PTPRE-203ENST00000442830 MYH7BA7E2Y1 1941 aa16.09■□□□□ 0.17
PTPRE-203ENST00000442830 B4E1Z4 1266 aa16.09■□□□□ 0.17
PTPRE-203ENST00000442830 TNFRSF10AO00220 468 aa16.09■□□□□ 0.17
PTPRE-203ENST00000442830 GTPBP6O43824 516 aaPredicted RBP16.09■□□□□ 0.17
PTPRE-203ENST00000442830 EIF3JO75822 258 aaKnown RBP16.09■□□□□ 0.17
PTPRE-203ENST00000442830 GOLGA8HP0CJ92 632 aa16.09■□□□□ 0.17
PTPRE-203ENST00000442830 PTGS1P23219 599 aa16.09■□□□□ 0.17
PTPRE-203ENST00000442830 DGKDQ16760 1214 aa16.09■□□□□ 0.17
PTPRE-203ENST00000442830 IFIT1BQ5T764 474 aaKnown RBP16.09■□□□□ 0.17
PTPRE-203ENST00000442830 ARHGEF16Q5VV41 709 aa16.09■□□□□ 0.17
PTPRE-203ENST00000442830 CCDC62Q6P9F0 684 aa16.09■□□□□ 0.17
PTPRE-203ENST00000442830 ENAHQ8N8S7 591 aaPredicted RBP16.09■□□□□ 0.17
PTPRE-203ENST00000442830 SYTL5Q8TDW5 730 aaPredicted RBP16.09■□□□□ 0.17
PTPRE-203ENST00000442830 ZKSCAN3Q9BRR0 538 aa16.09■□□□□ 0.17
PTPRE-203ENST00000442830 UBA5Q9GZZ9 404 aa16.09■□□□□ 0.17
PTPRE-203ENST00000442830 YBX2Q9Y2T7 364 aaKnown RBP16.09■□□□□ 0.17
PTPRE-203ENST00000442830 EFCAB14O75071 495 aa16.08■□□□□ 0.16
PTPRE-203ENST00000442830 MMP3P08254 477 aa16.08■□□□□ 0.16
PTPRE-203ENST00000442830 IQCF3P0C7M6 154 aa16.08■□□□□ 0.16
PTPRE-203ENST00000442830 GHRHRQ02643 423 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms