RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 SPATA21Q7Z572 469 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 LRGUKQ96M69 825 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 CARD9Q9H257 536 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 CUEDC2Q9H467 287 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 NDUFA13Q9P0J0 144 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 RWDD2AQ9UIY3 292 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 PACSIN2Q9UNF0 486 aaPredicted RBP11.22□□□□□ -0.61
LIN54-202ENST00000442461 LZTS1Q9Y250 596 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 EIF2AK4Q9P2K8 1649 aaKnown RBP11.22□□□□□ -0.61
LIN54-202ENST00000442461 DYTNA2CJ06 578 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 ATF2P15336 505 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 CA4P22748 312 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 NECTIN1Q15223 517 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 TNNI3KQ59H18 835 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 LRIG3Q6UXM1 1119 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 FUKQ8N0W3 1084 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 TTLL11Q8NHH1 800 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 EEF2KMTQ96G04 330 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 CLMNQ96JQ2 1002 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 HAUS8Q9BT25 410 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 RIC8AQ9NPQ8 531 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 PPP1R1BQ9UD71 204 aaPredicted RBP11.21□□□□□ -0.61
LIN54-202ENST00000442461 TRAF3IP3Q9Y228 551 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 FPGT-TNNI3KV9GXZ4 949 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 RPAP1Q9BWH6 1393 aaPredicted RBP11.21□□□□□ -0.61
LIN54-202ENST00000442461 MAP2K7O14733 419 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 ADCY3O60266 1144 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 GNA14O95837 355 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 GSTA1P08263 222 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 MYBL2P10244 700 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 ARHGAP4P98171 946 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 OCA2Q04671 838 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 SFSWAPQ12872 951 aaKnown RBP11.21□□□□□ -0.61
LIN54-202ENST00000442461 CUL4BQ13620 913 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 SPARCL1Q14515 664 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 RASSF3Q86WH2 238 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 MAML3Q96JK9 1138 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 UIMC1Q96RL1 719 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 PFDN4Q9NQP4 134 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 TBK1Q9UHD2 729 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 RAB21Q9UL25 225 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 UGGT2Q9NYU1 1516 aa11.21□□□□□ -0.61
LIN54-202ENST00000442461 KDRP35968 1356 aa11.21□□□□□ -0.62
LIN54-202ENST00000442461 HNRNPCL1O60812 293 aaKnown RBP11.21□□□□□ -0.62
LIN54-202ENST00000442461 HAUS5O94927 633 aa11.21□□□□□ -0.62
LIN54-202ENST00000442461 GNA11P29992 359 aa11.21□□□□□ -0.62
LIN54-202ENST00000442461 GRAMD1CQ8IYS0 662 aa11.21□□□□□ -0.62
LIN54-202ENST00000442461 PARD3BQ8TEW8 1205 aa11.21□□□□□ -0.62
LIN54-202ENST00000442461 APPBP2Q92624 585 aa11.21□□□□□ -0.62
LIN54-202ENST00000442461 MYL10Q9BUA6 226 aa11.21□□□□□ -0.62
LIN54-202ENST00000442461 EIF2AQ9BY44 585 aaKnown RBP11.21□□□□□ -0.62
LIN54-202ENST00000442461 GGT7Q9UJ14 662 aa11.21□□□□□ -0.62
LIN54-202ENST00000442461 STX8Q9UNK0 236 aa11.21□□□□□ -0.62
LIN54-202ENST00000442461 BZW2Q9Y6E2 419 aaKnown RBP11.21□□□□□ -0.62
LIN54-202ENST00000442461 ADCY9O60503 1353 aa11.21□□□□□ -0.62
LIN54-202ENST00000442461 COBLO75128 1261 aa11.21□□□□□ -0.62
LIN54-202ENST00000442461 TRHP20396 242 aaPredicted RBP11.21□□□□□ -0.62
LIN54-202ENST00000442461 POLD1P28340 1107 aa11.21□□□□□ -0.62
LIN54-202ENST00000442461 TNIP1Q15025 636 aa11.21□□□□□ -0.62
LIN54-202ENST00000442461 Q4G0T1 1027 aa11.21□□□□□ -0.62
LIN54-202ENST00000442461 THEMIS2Q5TEJ8 643 aa11.21□□□□□ -0.62
LIN54-202ENST00000442461 KIF2BQ8N4N8 673 aa11.21□□□□□ -0.62
LIN54-202ENST00000442461 CASP10Q92851 521 aa11.21□□□□□ -0.62
LIN54-202ENST00000442461 NRBF2Q96F24 287 aa11.21□□□□□ -0.62
LIN54-202ENST00000442461 SIKE1Q9BRV8 207 aa11.21□□□□□ -0.62
LIN54-202ENST00000442461 AP1M1Q9BXS5 423 aa11.21□□□□□ -0.62
LIN54-202ENST00000442461 USP44Q9H0E7 712 aa11.21□□□□□ -0.62
LIN54-202ENST00000442461 MRPL46Q9H2W6 279 aaKnown RBP11.21□□□□□ -0.62
LIN54-202ENST00000442461 FBXL5Q9UKA1 691 aa11.21□□□□□ -0.62
LIN54-202ENST00000442461 NQO1P15559 274 aaKnown RBP11.2□□□□□ -0.62
LIN54-202ENST00000442461 VHLP40337 213 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 DDR1Q08345 913 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 TMED2Q15363 201 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 WDR78Q5VTH9 848 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 C1orf146Q5VVC0 180 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 NFRKBQ6P4R8 1299 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 ANKLE2Q86XL3 938 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 CTAGE3PQ8IX95 158 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 TRIM55Q9BYV6 548 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 A1CFQ9NQ94 594 aaKnown RBP11.2□□□□□ -0.62
LIN54-202ENST00000442461 SNX12Q9UMY4 172 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 TEX33O43247 280 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 S100BP04271 92 aaPredicted RBP11.2□□□□□ -0.62
LIN54-202ENST00000442461 TMOD1P28289 359 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 DR1Q01658 176 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 LETM2Q2VYF4 491 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 PALM2Q8IXS6 379 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 MB21D1Q8N884 522 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 LRRN4CLQ8ND94 238 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 THAP11Q96EK4 314 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 EPS15L1Q9UBC2 864 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 TCOF1Q13428 1488 aaKnown RBP11.2□□□□□ -0.62
LIN54-202ENST00000442461 ZFYVE9O95405 1425 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 ATICP31939 592 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 AGBL2Q5U5Z8 902 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 TMED8Q6PL24 325 aaPredicted RBP11.2□□□□□ -0.62
LIN54-202ENST00000442461 TC2NQ8N9U0 490 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 SYMPKQ92797 1274 aaKnown RBP11.2□□□□□ -0.62
LIN54-202ENST00000442461 ITFG2Q969R8 447 aa11.2□□□□□ -0.62
LIN54-202ENST00000442461 IFT122Q9HBG6 1241 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms