RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 GCOM1H8Y6P7 765 aaPredicted RBP8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 POLR2MP0CAP2 368 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 DSG3P32926 999 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 GJA5P36382 358 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 ZNF165P49910 485 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 FAM160A1Q05DH4 1040 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 DMTNQ08495 405 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 CATSPERGQ6ZRH7 1159 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 DGKHQ86XP1 1220 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 EMILIN3Q9NT22 766 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 PPP1R9AQ9ULJ8 1098 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 GINS2Q9Y248 185 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 MYH13Q9UKX3 1938 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 DYNC1LI2O43237 492 aaPredicted RBP8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 KCNJ6P48051 423 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 PTPAQ15257 358 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 NTRK3Q16288 839 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 SHROOM1Q2M3G4 852 aaPredicted RBP8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 MOV10L1Q9BXT6 1211 aaKnown RBP8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 ARHGAP39Q9C0H5 1083 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 CPVLQ9H3G5 476 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 ZCCHC17Q9NP64 241 aaKnown RBP8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 ZSWIM5Q9P217 1185 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 hCG_1642624A0A1W2PR95 340 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 PEX10O60683 326 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 MYL3P08590 195 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 EIF2AK2P19525 551 aaKnown RBP8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 SSRP1Q08945 709 aaKnown RBP8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 MAP2K5Q13163 448 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 ADALQ6DHV7 355 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 SPC24Q8NBT2 197 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 PTPN18Q99952 460 aa8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 EPB41L4AQ9HCS5 686 aaPredicted RBP8.36□□□□□ -1.07
CDC42BPA-208ENST00000442054 ZMYM6O95789 1325 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 CCDC194A0A1B0GVG4 234 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 ZBBXA8MT70 800 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 MDM2Q00987 491 aaPredicted RBP8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 CDC37Q16543 378 aaPredicted RBP8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 ZNF654Q8IZM8 581 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 TUBE1Q9UJT0 475 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 ZNF112Q9UJU3 913 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 FAM184BQ9ULE4 1060 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 PTPN22Q9Y2R2 807 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 COL1A1P02452 1464 aaPredicted RBP8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 SMTNL1A8MU46 457 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 TLR3O15455 904 aaKnown RBP8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 TTBK2Q6IQ55 1244 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 TMEM139Q8IV31 216 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 GLG1Q92896 1179 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 C6orf50Q9HD87 102 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 CFAP45Q9UL16 551 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 CLIC4Q9Y696 253 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 CTAGE5O15320 804 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 MSCO60682 206 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 CCL5P13501 91 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 NDUFA8P51970 172 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 SHISA4Q96DD7 197 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 APBA2Q99767 749 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 PORCNQ9H237 461 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 L2HGDHQ9H9P8 463 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 PRR12Q9ULL5 1215 aa8.35□□□□□ -1.07
CDC42BPA-208ENST00000442054 SLC15A5A6NIM6 579 aa8.34□□□□□ -1.07
CDC42BPA-208ENST00000442054 BAATQ14032 418 aaPredicted RBP8.34□□□□□ -1.07
CDC42BPA-208ENST00000442054 NAA30Q147X3 362 aaPredicted RBP8.34□□□□□ -1.07
CDC42BPA-208ENST00000442054 PPP2R5BQ15173 497 aa8.34□□□□□ -1.07
CDC42BPA-208ENST00000442054 ALX1Q15699 326 aa8.34□□□□□ -1.07
CDC42BPA-208ENST00000442054 E4F1Q66K89 784 aaPredicted RBP8.34□□□□□ -1.07
CDC42BPA-208ENST00000442054 ARMCX5Q6P1M9 558 aa8.34□□□□□ -1.07
CDC42BPA-208ENST00000442054 CHST13Q8NET6 341 aa8.34□□□□□ -1.07
CDC42BPA-208ENST00000442054 FBXO18Q8NFZ0 1043 aa8.34□□□□□ -1.07
CDC42BPA-208ENST00000442054 WASF1Q92558 559 aa8.34□□□□□ -1.07
CDC42BPA-208ENST00000442054 AGBL1Q96MI9 1066 aa8.34□□□□□ -1.07
CDC42BPA-208ENST00000442054 RMDN3Q96TC7 470 aa8.34□□□□□ -1.07
CDC42BPA-208ENST00000442054 LZTS2Q9BRK4 669 aa8.34□□□□□ -1.07
CDC42BPA-208ENST00000442054 R3HDMLQ9H3Y0 253 aa8.34□□□□□ -1.07
CDC42BPA-208ENST00000442054 V9GY48 417 aaPredicted RBP8.34□□□□□ -1.07
CDC42BPA-208ENST00000442054 STX1AQ16623 288 aa8.34□□□□□ -1.07
CDC42BPA-208ENST00000442054 TATDN1Q6P1N9 297 aa8.34□□□□□ -1.07
CDC42BPA-208ENST00000442054 NLRX1Q86UT6 975 aa8.34□□□□□ -1.07
CDC42BPA-208ENST00000442054 RETREG2Q8NC44 543 aa8.34□□□□□ -1.07
CDC42BPA-208ENST00000442054 CCDC148Q8NFR7 591 aa8.34□□□□□ -1.07
CDC42BPA-208ENST00000442054 ZNF384Q8TF68 577 aa8.34□□□□□ -1.07
CDC42BPA-208ENST00000442054 MS4A4AQ96JQ5 239 aa8.34□□□□□ -1.07
CDC42BPA-208ENST00000442054 SPDYE16A6NNV3 312 aaPredicted RBP8.34□□□□□ -1.08
CDC42BPA-208ENST00000442054 DCDC2CA8MYV0 355 aa8.34□□□□□ -1.08
CDC42BPA-208ENST00000442054 FAM155AB1AL88 458 aaPredicted RBP8.34□□□□□ -1.08
CDC42BPA-208ENST00000442054 ORC4O43929 436 aa8.34□□□□□ -1.08
CDC42BPA-208ENST00000442054 PTMAP06454 111 aaKnown RBP8.34□□□□□ -1.08
CDC42BPA-208ENST00000442054 RAG1P15918 1043 aa8.34□□□□□ -1.08
CDC42BPA-208ENST00000442054 BMP6P22004 513 aa8.34□□□□□ -1.08
CDC42BPA-208ENST00000442054 Q3C1V9 767 aa8.34□□□□□ -1.08
CDC42BPA-208ENST00000442054 EP400NLQ6ZTU2 488 aa8.34□□□□□ -1.08
CDC42BPA-208ENST00000442054 CMTR1Q8N1G2 835 aaKnown RBP8.34□□□□□ -1.08
CDC42BPA-208ENST00000442054 MTIF3Q9H2K0 278 aaKnown RBP8.34□□□□□ -1.08
CDC42BPA-208ENST00000442054 AZI2Q9H6S1 392 aa8.34□□□□□ -1.08
CDC42BPA-208ENST00000442054 RBM28Q9NW13 759 aaKnown RBP8.34□□□□□ -1.08
CDC42BPA-208ENST00000442054 CEP290O15078 2479 aa8.33□□□□□ -1.08
CDC42BPA-208ENST00000442054 ANKRD31Q8N7Z5 1873 aa8.33□□□□□ -1.08
CDC42BPA-208ENST00000442054 A0A1W2PRG0 241 aa8.33□□□□□ -1.08
CDC42BPA-208ENST00000442054 PHF20L1A8MW92 1017 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms