RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 NSUN6Q8TEA1 469 aaKnown RBP21.98■■□□□ 1.11
HMGB3P22-201ENST00000442010 SCFD2Q8WU76 684 aa21.98■■□□□ 1.11
HMGB3P22-201ENST00000442010 VTI1AQ96AJ9 217 aa21.98■■□□□ 1.11
HMGB3P22-201ENST00000442010 IWS1Q96ST2 819 aa21.98■■□□□ 1.11
HMGB3P22-201ENST00000442010 PCDHA1Q9Y5I3 950 aa21.98■■□□□ 1.11
HMGB3P22-201ENST00000442010 LAMA2P24043 3122 aaKnown RBP21.97■■□□□ 1.11
HMGB3P22-201ENST00000442010 NKRFO15226 690 aaKnown RBP eCLIP21.97■■□□□ 1.11
HMGB3P22-201ENST00000442010 ZEB2O60315 1214 aa21.97■■□□□ 1.11
HMGB3P22-201ENST00000442010 DDAH1O94760 285 aa21.97■■□□□ 1.11
HMGB3P22-201ENST00000442010 ARIH2O95376 493 aa21.97■■□□□ 1.11
HMGB3P22-201ENST00000442010 CD4P01730 458 aa21.97■■□□□ 1.11
HMGB3P22-201ENST00000442010 C9orf50Q5SZB4 431 aa21.97■■□□□ 1.11
HMGB3P22-201ENST00000442010 CCDC62Q6P9F0 684 aa21.97■■□□□ 1.11
HMGB3P22-201ENST00000442010 CASC1Q6TDU7 716 aa21.97■■□□□ 1.11
HMGB3P22-201ENST00000442010 HOMER1Q86YM7 354 aa21.97■■□□□ 1.11
HMGB3P22-201ENST00000442010 TMEM87BQ96K49 555 aa21.97■■□□□ 1.11
HMGB3P22-201ENST00000442010 RMDN3Q96TC7 470 aa21.97■■□□□ 1.11
HMGB3P22-201ENST00000442010 MAP3K20Q9NYL2 800 aaKnown RBP21.97■■□□□ 1.11
HMGB3P22-201ENST00000442010 PNMA6FA0A0J9YX94 578 aa21.96■■□□□ 1.11
HMGB3P22-201ENST00000442010 CFBP00751 764 aa21.96■■□□□ 1.11
HMGB3P22-201ENST00000442010 RAG1P15918 1043 aa21.96■■□□□ 1.11
HMGB3P22-201ENST00000442010 LIFRP42702 1097 aa21.96■■□□□ 1.11
HMGB3P22-201ENST00000442010 ITGA7Q13683 1181 aa21.96■■□□□ 1.11
HMGB3P22-201ENST00000442010 PPP2R5BQ15173 497 aa21.96■■□□□ 1.11
HMGB3P22-201ENST00000442010 SHHQ15465 462 aa21.96■■□□□ 1.11
HMGB3P22-201ENST00000442010 SAMD3Q8N6K7 520 aa21.96■■□□□ 1.11
HMGB3P22-201ENST00000442010 COPS5Q92905 334 aa21.96■■□□□ 1.11
HMGB3P22-201ENST00000442010 CCDC136Q96JN2 1154 aa21.96■■□□□ 1.11
HMGB3P22-201ENST00000442010 MYL10Q9BUA6 226 aa21.96■■□□□ 1.11
HMGB3P22-201ENST00000442010 PXMP2Q9NR77 195 aa21.96■■□□□ 1.11
HMGB3P22-201ENST00000442010 CDC45O75419 566 aa21.95■■□□□ 1.1
HMGB3P22-201ENST00000442010 TIMP1P01033 207 aa21.95■■□□□ 1.1
HMGB3P22-201ENST00000442010 SMARCA1P28370 1054 aa21.95■■□□□ 1.1
HMGB3P22-201ENST00000442010 EPHB4P54760 987 aa21.95■■□□□ 1.1
HMGB3P22-201ENST00000442010 TTLL4Q14679 1199 aa21.95■■□□□ 1.1
HMGB3P22-201ENST00000442010 TMTC2Q8N394 836 aa21.95■■□□□ 1.1
HMGB3P22-201ENST00000442010 OR6J1Q8NGC5 347 aa21.95■■□□□ 1.1
HMGB3P22-201ENST00000442010 SEZ6LQ9BYH1 1024 aa21.95■■□□□ 1.1
HMGB3P22-201ENST00000442010 A6NJR5 290 aa21.94■■□□□ 1.1
HMGB3P22-201ENST00000442010 TXNP10599 105 aaKnown RBP21.94■■□□□ 1.1
HMGB3P22-201ENST00000442010 CPT1AP50416 773 aa21.94■■□□□ 1.1
HMGB3P22-201ENST00000442010 PSMC6P62333 389 aa21.94■■□□□ 1.1
HMGB3P22-201ENST00000442010 PURAQ00577 322 aaKnown RBP21.94■■□□□ 1.1
HMGB3P22-201ENST00000442010 STXBP2Q15833 593 aa21.94■■□□□ 1.1
HMGB3P22-201ENST00000442010 TSGA10IPQ3SY00 556 aa21.94■■□□□ 1.1
HMGB3P22-201ENST00000442010 ARHGEF16Q5VV41 709 aa21.94■■□□□ 1.1
HMGB3P22-201ENST00000442010 SPZ1Q9BXG8 430 aa21.94■■□□□ 1.1
HMGB3P22-201ENST00000442010 NR3C2P08235 984 aa21.93■■□□□ 1.1
HMGB3P22-201ENST00000442010 EIF2AK2P19525 551 aaKnown RBP21.93■■□□□ 1.1
HMGB3P22-201ENST00000442010 TRAF1Q13077 416 aa21.93■■□□□ 1.1
HMGB3P22-201ENST00000442010 CTCFLQ8NI51 663 aaPredicted RBP21.93■■□□□ 1.1
HMGB3P22-201ENST00000442010 POLR3EQ9NVU0 708 aa21.93■■□□□ 1.1
HMGB3P22-201ENST00000442010 EIF3JO75822 258 aaKnown RBP21.92■■□□□ 1.1
HMGB3P22-201ENST00000442010 HOXA13P31271 388 aaPredicted RBP21.92■■□□□ 1.1
HMGB3P22-201ENST00000442010 RNF20Q5VTR2 975 aa21.92■■□□□ 1.1
HMGB3P22-201ENST00000442010 SEPT14Q6ZU15 432 aa21.92■■□□□ 1.1
HMGB3P22-201ENST00000442010 SGMS1Q86VZ5 419 aa21.92■■□□□ 1.1
HMGB3P22-201ENST00000442010 RASEFQ8IZ41 740 aa21.92■■□□□ 1.1
HMGB3P22-201ENST00000442010 PDCD2LQ9BRP1 358 aa21.92■■□□□ 1.1
HMGB3P22-201ENST00000442010 LRRC2Q9BYS8 371 aa21.92■■□□□ 1.1
HMGB3P22-201ENST00000442010 CCDC69A6NI79 296 aa21.91■■□□□ 1.1
HMGB3P22-201ENST00000442010 TLR3O15455 904 aaKnown RBP21.91■■□□□ 1.1
HMGB3P22-201ENST00000442010 RGS20O76081 388 aa21.91■■□□□ 1.1
HMGB3P22-201ENST00000442010 KIF5BP33176 963 aa21.91■■□□□ 1.1
HMGB3P22-201ENST00000442010 EXOSC10Q01780 885 aaKnown RBP21.91■■□□□ 1.1
HMGB3P22-201ENST00000442010 FPGSQ05932 587 aa21.91■■□□□ 1.1
HMGB3P22-201ENST00000442010 LY6KQ17RY6 165 aa21.91■■□□□ 1.1
HMGB3P22-201ENST00000442010 MFSD5Q6N075 450 aa21.91■■□□□ 1.1
HMGB3P22-201ENST00000442010 SRBD1Q8N5C6 995 aaKnown RBP21.91■■□□□ 1.1
HMGB3P22-201ENST00000442010 LZTS2Q9BRK4 669 aa21.91■■□□□ 1.1
HMGB3P22-201ENST00000442010 GCOM1H8Y6P7 765 aaPredicted RBP21.9■■□□□ 1.1
HMGB3P22-201ENST00000442010 B4GALT4O60513 344 aa21.9■■□□□ 1.1
HMGB3P22-201ENST00000442010 PLEKHA8P1O95397 391 aa21.9■■□□□ 1.1
HMGB3P22-201ENST00000442010 MYL3P08590 195 aa21.9■■□□□ 1.1
HMGB3P22-201ENST00000442010 POLR2MP0CAP2 368 aa21.9■■□□□ 1.1
HMGB3P22-201ENST00000442010 RXRAP19793 462 aa21.9■■□□□ 1.1
HMGB3P22-201ENST00000442010 ARHGAP1Q07960 439 aa21.9■■□□□ 1.1
HMGB3P22-201ENST00000442010 PGM5Q15124 567 aa21.9■■□□□ 1.1
HMGB3P22-201ENST00000442010 ADCK5Q3MIX3 580 aa21.9■■□□□ 1.1
HMGB3P22-201ENST00000442010 NFXL1Q6ZNB6 911 aa21.9■■□□□ 1.1
HMGB3P22-201ENST00000442010 VSIG10LQ86VR7 867 aa21.9■■□□□ 1.1
HMGB3P22-201ENST00000442010 NEK1Q96PY6 1258 aa21.9■■□□□ 1.1
HMGB3P22-201ENST00000442010 MTG1Q9BT17 334 aaPredicted RBP21.9■■□□□ 1.1
HMGB3P22-201ENST00000442010 DDX41Q9UJV9 622 aaKnown RBP21.9■■□□□ 1.1
HMGB3P22-201ENST00000442010 TRIP12Q14669 1992 aaPredicted RBP21.9■■□□□ 1.1
HMGB3P22-201ENST00000442010 FRMPD4Q14CM0 1322 aa21.89■■□□□ 1.1
HMGB3P22-201ENST00000442010 KPNA6O60684 536 aa21.89■■□□□ 1.09
HMGB3P22-201ENST00000442010 CALM1P0DP23 149 aa21.89■■□□□ 1.09
HMGB3P22-201ENST00000442010 CALM2P0DP24 149 aa21.89■■□□□ 1.09
HMGB3P22-201ENST00000442010 CALM3P0DP25 149 aa21.89■■□□□ 1.09
HMGB3P22-201ENST00000442010 GNAQP50148 359 aa21.89■■□□□ 1.09
HMGB3P22-201ENST00000442010 IL31RAQ8NI17 732 aa21.89■■□□□ 1.09
HMGB3P22-201ENST00000442010 PIBF1Q8WXW3 757 aa21.89■■□□□ 1.09
HMGB3P22-201ENST00000442010 KCNB2Q92953 911 aa21.89■■□□□ 1.09
HMGB3P22-201ENST00000442010 TRPV6Q9H1D0 765 aa21.89■■□□□ 1.09
HMGB3P22-201ENST00000442010 ALDH8A1Q9H2A2 487 aaPredicted RBP21.89■■□□□ 1.09
HMGB3P22-201ENST00000442010 DOCK5Q9H7D0 1870 aa21.89■■□□□ 1.09
HMGB3P22-201ENST00000442010 GH1P01241 217 aa21.88■■□□□ 1.09
HMGB3P22-201ENST00000442010 BRDTQ58F21 947 aaPredicted RBP21.88■■□□□ 1.09
HMGB3P22-201ENST00000442010 Q7L0L9 218 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms