RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 IQCEQ6IPM2 695 aa18.36■□□□□ 0.53
SEMA3B-207ENST00000441915 TEX11Q8IYF3 940 aa18.36■□□□□ 0.53
SEMA3B-207ENST00000441915 CEP95Q96GE4 821 aa18.36■□□□□ 0.53
SEMA3B-207ENST00000441915 CDK5RAP3Q96JB5 506 aa18.36■□□□□ 0.53
SEMA3B-207ENST00000441915 STK17AQ9UEE5 414 aa18.36■□□□□ 0.53
SEMA3B-207ENST00000441915 ESYT2A0FGR8 921 aa18.36■□□□□ 0.53
SEMA3B-207ENST00000441915 USO1O60763 962 aaKnown RBP18.36■□□□□ 0.53
SEMA3B-207ENST00000441915 CALCRLQ16602 461 aa18.36■□□□□ 0.53
SEMA3B-207ENST00000441915 CCDC96Q2M329 555 aa18.36■□□□□ 0.53
SEMA3B-207ENST00000441915 ARHGEF1Q92888 912 aaKnown RBP18.36■□□□□ 0.53
SEMA3B-207ENST00000441915 PVALEFA0A1B0GWK0 134 aa18.36■□□□□ 0.53
SEMA3B-207ENST00000441915 PHACTR2O75167 634 aa18.36■□□□□ 0.53
SEMA3B-207ENST00000441915 FGFR1OPO95684 399 aaKnown RBP18.36■□□□□ 0.53
SEMA3B-207ENST00000441915 TNNT3P45378 269 aaPredicted RBP18.36■□□□□ 0.53
SEMA3B-207ENST00000441915 RAD51AP2Q09MP3 1159 aa18.36■□□□□ 0.53
SEMA3B-207ENST00000441915 TMEM266Q2M3C6 531 aa18.36■□□□□ 0.53
SEMA3B-207ENST00000441915 VWA3BQ502W6 1294 aa18.36■□□□□ 0.53
SEMA3B-207ENST00000441915 UNC13DQ70J99 1090 aa18.36■□□□□ 0.53
SEMA3B-207ENST00000441915 TRIM58Q8NG06 486 aa18.36■□□□□ 0.53
SEMA3B-207ENST00000441915 LARP4BQ92615 738 aaKnown RBP18.36■□□□□ 0.53
SEMA3B-207ENST00000441915 NDST4Q9H3R1 872 aa18.36■□□□□ 0.53
SEMA3B-207ENST00000441915 GPR75-ASB3A0A0A6YYF3 556 aa18.35■□□□□ 0.53
SEMA3B-207ENST00000441915 PLCG2P16885 1265 aa18.35■□□□□ 0.53
SEMA3B-207ENST00000441915 HNRNPH3P31942 346 aaKnown RBP18.35■□□□□ 0.53
SEMA3B-207ENST00000441915 IRX3P78415 501 aaPredicted RBP18.35■□□□□ 0.53
SEMA3B-207ENST00000441915 PAXIP1Q6ZW49 1069 aaPredicted RBP18.35■□□□□ 0.53
SEMA3B-207ENST00000441915 PTF1AQ7RTS3 328 aa18.35■□□□□ 0.53
SEMA3B-207ENST00000441915 CCDC84Q86UT8 332 aaPredicted RBP18.35■□□□□ 0.53
SEMA3B-207ENST00000441915 SLC51AQ86UW1 340 aa18.35■□□□□ 0.53
SEMA3B-207ENST00000441915 RAB34Q9BZG1 259 aa18.35■□□□□ 0.53
SEMA3B-207ENST00000441915 hCG_1984214I3L0E3 225 aa18.35■□□□□ 0.53
SEMA3B-207ENST00000441915 NKRFO15226 690 aaKnown RBP eCLIP18.35■□□□□ 0.539e-6■□□□□ 8.3
SEMA3B-207ENST00000441915 C2CD5Q86YS7 1000 aa18.35■□□□□ 0.53
SEMA3B-207ENST00000441915 FNBP4Q8N3X1 1017 aaPredicted RBP18.35■□□□□ 0.53
SEMA3B-207ENST00000441915 ZNF713Q8N859 430 aaPredicted RBP18.35■□□□□ 0.53
SEMA3B-207ENST00000441915 GPR101Q96P66 508 aaPredicted RBP18.35■□□□□ 0.53
SEMA3B-207ENST00000441915 MTMR9Q96QG7 549 aa18.35■□□□□ 0.53
SEMA3B-207ENST00000441915 IFIH1Q9BYX4 1025 aaKnown RBP18.35■□□□□ 0.53
SEMA3B-207ENST00000441915 UBA5Q9GZZ9 404 aa18.35■□□□□ 0.53
SEMA3B-207ENST00000441915 BLOC1S4Q9NUP1 217 aa18.35■□□□□ 0.53
SEMA3B-207ENST00000441915 JRKLQ9Y4A0 524 aa18.35■□□□□ 0.53
SEMA3B-207ENST00000441915 SBF2Q86WG5 1849 aa18.34■□□□□ 0.53
SEMA3B-207ENST00000441915 MYMKA6NI61 221 aa18.34■□□□□ 0.53
SEMA3B-207ENST00000441915 ZNF185O15231 689 aa18.34■□□□□ 0.53
SEMA3B-207ENST00000441915 FXR2P51116 673 aaKnown RBP eCLIP18.34■□□□□ 0.53
SEMA3B-207ENST00000441915 GRB10Q13322 594 aa18.34■□□□□ 0.53
SEMA3B-207ENST00000441915 CCDC70Q6NSX1 233 aa18.34■□□□□ 0.53
SEMA3B-207ENST00000441915 KRT26Q7Z3Y9 468 aa18.34■□□□□ 0.53
SEMA3B-207ENST00000441915 DEF6Q9H4E7 631 aa18.34■□□□□ 0.53
SEMA3B-207ENST00000441915 FAM207AQ9NSI2 230 aaPredicted RBP18.34■□□□□ 0.53
SEMA3B-207ENST00000441915 TMEM260Q9NX78 707 aa18.34■□□□□ 0.53
SEMA3B-207ENST00000441915 ZNF263O14978 683 aa18.34■□□□□ 0.53
SEMA3B-207ENST00000441915 TACC1O75410 805 aa18.34■□□□□ 0.53
SEMA3B-207ENST00000441915 PLEKP08567 350 aaPredicted RBP18.34■□□□□ 0.53
SEMA3B-207ENST00000441915 MAN2A1Q16706 1144 aa18.34■□□□□ 0.53
SEMA3B-207ENST00000441915 C15orf52Q6ZUT6 534 aaKnown RBP18.34■□□□□ 0.53
SEMA3B-207ENST00000441915 DYMQ7RTS9 669 aa18.34■□□□□ 0.53
SEMA3B-207ENST00000441915 GUF1Q8N442 669 aaKnown RBP18.34■□□□□ 0.53
SEMA3B-207ENST00000441915 RIOX1Q9H6W3 641 aa18.34■□□□□ 0.53
SEMA3B-207ENST00000441915 CD209Q9NNX6 404 aa18.34■□□□□ 0.53
SEMA3B-207ENST00000441915 ABCB11O95342 1321 aa18.33■□□□□ 0.53
SEMA3B-207ENST00000441915 USP17L5A8MUK1 530 aa18.33■□□□□ 0.53
SEMA3B-207ENST00000441915 AARSP49588 968 aaKnown RBP eCLIP18.33■□□□□ 0.53
SEMA3B-207ENST00000441915 COG1Q8WTW3 980 aa18.33■□□□□ 0.53
SEMA3B-207ENST00000441915 MMRN2Q9H8L6 949 aa18.33■□□□□ 0.53
SEMA3B-207ENST00000441915 ARHGAP20Q9P2F6 1191 aa18.33■□□□□ 0.53
SEMA3B-207ENST00000441915 FEZ2Q9UHY8 353 aaPredicted RBP18.33■□□□□ 0.53
SEMA3B-207ENST00000441915 CCNL1Q9UK58 526 aaPredicted RBP18.33■□□□□ 0.53
SEMA3B-207ENST00000441915 SIK3Q9Y2K2 1263 aa18.33■□□□□ 0.53
SEMA3B-207ENST00000441915 LRRC63Q05C16 580 aa18.33■□□□□ 0.52
SEMA3B-207ENST00000441915 GOLGA6L1Q8N7Z2 621 aa18.33■□□□□ 0.52
SEMA3B-207ENST00000441915 PCDHA13Q9Y5I0 950 aa18.33■□□□□ 0.52
SEMA3B-207ENST00000441915 TNRC6CQ9HCJ0 1690 aaKnown RBP18.32■□□□□ 0.52
SEMA3B-207ENST00000441915 RFC4P35249 363 aa18.32■□□□□ 0.52
SEMA3B-207ENST00000441915 KIF11P52732 1056 aa18.32■□□□□ 0.52
SEMA3B-207ENST00000441915 TRERF1Q96PN7 1200 aa18.32■□□□□ 0.52
SEMA3B-207ENST00000441915 PNMA5Q96PV4 448 aa18.32■□□□□ 0.52
SEMA3B-207ENST00000441915 SNX12Q9UMY4 172 aa18.32■□□□□ 0.52
SEMA3B-207ENST00000441915 DDX60LQ5H9U9 1706 aaKnown RBP18.32■□□□□ 0.52
SEMA3B-207ENST00000441915 PDE2AO00408 941 aaPredicted RBP18.32■□□□□ 0.52
SEMA3B-207ENST00000441915 AKR1B10O60218 316 aa18.32■□□□□ 0.52
SEMA3B-207ENST00000441915 IVLP07476 585 aa18.32■□□□□ 0.52
SEMA3B-207ENST00000441915 PDHBP11177 359 aa18.32■□□□□ 0.52
SEMA3B-207ENST00000441915 PDIA5Q14554 519 aa18.32■□□□□ 0.52
SEMA3B-207ENST00000441915 KRT79Q5XKE5 535 aa18.32■□□□□ 0.52
SEMA3B-207ENST00000441915 AMIGO3Q86WK7 504 aa18.32■□□□□ 0.52
SEMA3B-207ENST00000441915 LRRC27Q9C0I9 530 aa18.32■□□□□ 0.52
SEMA3B-207ENST00000441915 SH2D4AQ9H788 454 aa18.32■□□□□ 0.52
SEMA3B-207ENST00000441915 FAM204AQ9H8W3 233 aa18.32■□□□□ 0.52
SEMA3B-207ENST00000441915 HPCAL4Q9UM19 191 aa18.32■□□□□ 0.52
SEMA3B-207ENST00000441915 RNF40O75150 1001 aa18.31■□□□□ 0.52
SEMA3B-207ENST00000441915 ZMYND10O75800 440 aa18.31■□□□□ 0.52
SEMA3B-207ENST00000441915 HOXA7P31268 230 aaPredicted RBP18.31■□□□□ 0.52
SEMA3B-207ENST00000441915 NOVP48745 357 aa18.31■□□□□ 0.52
SEMA3B-207ENST00000441915 ADCY7P51828 1080 aa18.31■□□□□ 0.52
SEMA3B-207ENST00000441915 SLF2Q8IX21 1173 aa18.31■□□□□ 0.52
SEMA3B-207ENST00000441915 CNBD1Q8NA66 436 aa18.31■□□□□ 0.52
SEMA3B-207ENST00000441915 POTEMA6NI47 508 aa18.31■□□□□ 0.52
SEMA3B-207ENST00000441915 EPHB6O15197 1021 aa18.31■□□□□ 0.52
SEMA3B-207ENST00000441915 SLC37A4O43826 429 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms