RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 CABYRO75952 493 aa21.12■□□□□ 0.97
SMPD4-210ENST00000441135 EDNRBP24530 442 aa21.12■□□□□ 0.97
SMPD4-210ENST00000441135 IRX5P78411 483 aaPredicted RBP21.12■□□□□ 0.97
SMPD4-210ENST00000441135 PDE4DQ08499 809 aa21.12■□□□□ 0.97
SMPD4-210ENST00000441135 BLOC1S2Q6QNY1 142 aa21.12■□□□□ 0.97
SMPD4-210ENST00000441135 SH3RF1Q7Z6J0 888 aa21.12■□□□□ 0.97
SMPD4-210ENST00000441135 FBXO11Q86XK2 927 aa21.12■□□□□ 0.97
SMPD4-210ENST00000441135 VTI1AQ96AJ9 217 aa21.12■□□□□ 0.97
SMPD4-210ENST00000441135 TRIM43Q96BQ3 446 aaPredicted RBP21.12■□□□□ 0.97
SMPD4-210ENST00000441135 LRCH3Q96II8 777 aa21.12■□□□□ 0.97
SMPD4-210ENST00000441135 TM6SF1Q9BZW5 370 aa21.12■□□□□ 0.97
SMPD4-210ENST00000441135 LAMA3Q16787 3333 aa21.12■□□□□ 0.97
SMPD4-210ENST00000441135 DYNC1LI2O43237 492 aaPredicted RBP21.11■□□□□ 0.97
SMPD4-210ENST00000441135 BEX3Q00994 111 aa21.11■□□□□ 0.97
SMPD4-210ENST00000441135 DUSP28Q4G0W2 176 aa21.11■□□□□ 0.97
SMPD4-210ENST00000441135 APOA5Q6Q788 366 aa21.11■□□□□ 0.97
SMPD4-210ENST00000441135 SYNE3Q6ZMZ3 975 aa21.11■□□□□ 0.97
SMPD4-210ENST00000441135 BADQ92934 168 aa21.11■□□□□ 0.97
SMPD4-210ENST00000441135 AMNQ9BXJ7 453 aa21.11■□□□□ 0.97
SMPD4-210ENST00000441135 LRRC2Q9BYS8 371 aa21.11■□□□□ 0.97
SMPD4-210ENST00000441135 AGXT2Q9BYV1 514 aa21.11■□□□□ 0.97
SMPD4-210ENST00000441135 TMEM39AQ9NV64 488 aa21.11■□□□□ 0.97
SMPD4-210ENST00000441135 MRPL11Q9Y3B7 192 aaKnown RBP21.11■□□□□ 0.97
SMPD4-210ENST00000441135 ARVCFO00192 962 aa21.1■□□□□ 0.97
SMPD4-210ENST00000441135 CYTH3O43739 400 aa21.1■□□□□ 0.97
SMPD4-210ENST00000441135 RPS6KB1P23443 525 aa21.1■□□□□ 0.97
SMPD4-210ENST00000441135 ANAPC15P60006 121 aa21.1■□□□□ 0.97
SMPD4-210ENST00000441135 FAAP100Q0VG06 881 aa21.1■□□□□ 0.97
SMPD4-210ENST00000441135 SLC35G1Q2M3R5 365 aa21.1■□□□□ 0.97
SMPD4-210ENST00000441135 WDR11Q9BZH6 1224 aa21.1■□□□□ 0.97
SMPD4-210ENST00000441135 VAT1LQ9HCJ6 419 aa21.1■□□□□ 0.97
SMPD4-210ENST00000441135 RBM47A0AV96 593 aaKnown RBP21.09■□□□□ 0.97
SMPD4-210ENST00000441135 RAG1P15918 1043 aa21.09■□□□□ 0.97
SMPD4-210ENST00000441135 CDK7P50613 346 aa21.09■□□□□ 0.97
SMPD4-210ENST00000441135 GHRHRQ02643 423 aa21.09■□□□□ 0.97
SMPD4-210ENST00000441135 PPP2R5BQ15173 497 aa21.09■□□□□ 0.97
SMPD4-210ENST00000441135 CXCL17Q6UXB2 119 aa21.09■□□□□ 0.97
SMPD4-210ENST00000441135 SAMD3Q8N6K7 520 aa21.09■□□□□ 0.97
SMPD4-210ENST00000441135 FANCBQ8NB91 859 aa21.09■□□□□ 0.97
SMPD4-210ENST00000441135 SCFD2Q8WU76 684 aa21.09■□□□□ 0.97
SMPD4-210ENST00000441135 IL17RAQ96F46 866 aa21.09■□□□□ 0.97
SMPD4-210ENST00000441135 MYL10Q9BUA6 226 aa21.09■□□□□ 0.97
SMPD4-210ENST00000441135 SEZ6LQ9BYH1 1024 aa21.09■□□□□ 0.97
SMPD4-210ENST00000441135 ZSWIM6Q9HCJ5 1215 aa21.09■□□□□ 0.97
SMPD4-210ENST00000441135 RBM28Q9NW13 759 aaKnown RBP21.09■□□□□ 0.97
SMPD4-210ENST00000441135 PNMA6FA0A0J9YX94 578 aa21.08■□□□□ 0.97
SMPD4-210ENST00000441135 NKRFO15226 690 aaKnown RBP eCLIP21.08■□□□□ 0.97
SMPD4-210ENST00000441135 CASTP20810 708 aaKnown RBP21.08■□□□□ 0.97
SMPD4-210ENST00000441135 SYTL5Q8TDW5 730 aaPredicted RBP21.08■□□□□ 0.97
SMPD4-210ENST00000441135 NSUN6Q8TEA1 469 aaKnown RBP21.08■□□□□ 0.97
SMPD4-210ENST00000441135 MAP3K20Q9NYL2 800 aaKnown RBP21.08■□□□□ 0.97
SMPD4-210ENST00000441135 BAZ2BQ9UIF8 2168 aaKnown RBP21.08■□□□□ 0.97
SMPD4-210ENST00000441135 TBX21Q9UL17 535 aa21.08■□□□□ 0.97
SMPD4-210ENST00000441135 NID2Q14112 1375 aa21.08■□□□□ 0.96
SMPD4-210ENST00000441135 TLR3O15455 904 aaKnown RBP21.07■□□□□ 0.96
SMPD4-210ENST00000441135 ZBTB43O43298 467 aa21.07■□□□□ 0.96
SMPD4-210ENST00000441135 TMTC3Q6ZXV5 915 aa21.07■□□□□ 0.96
SMPD4-210ENST00000441135 MICU3Q86XE3 530 aa21.07■□□□□ 0.96
SMPD4-210ENST00000441135 TCEANC2Q96MN5 208 aa21.07■□□□□ 0.96
SMPD4-210ENST00000441135 PTGS1P23219 599 aa21.06■□□□□ 0.96
SMPD4-210ENST00000441135 ITGB8P26012 769 aa21.06■□□□□ 0.96
SMPD4-210ENST00000441135 CPT1AP50416 773 aa21.06■□□□□ 0.96
SMPD4-210ENST00000441135 FGD1P98174 961 aa21.06■□□□□ 0.96
SMPD4-210ENST00000441135 BRDTQ58F21 947 aaPredicted RBP21.06■□□□□ 0.96
SMPD4-210ENST00000441135 TMEM63BQ5T3F8 832 aa21.06■□□□□ 0.96
SMPD4-210ENST00000441135 RUFY3Q7L099 469 aa21.06■□□□□ 0.96
SMPD4-210ENST00000441135 FAM126BQ8IXS8 530 aa21.06■□□□□ 0.96
SMPD4-210ENST00000441135 PIGSQ96S52 555 aa21.06■□□□□ 0.96
SMPD4-210ENST00000441135 IWS1Q96ST2 819 aa21.06■□□□□ 0.96
SMPD4-210ENST00000441135 BRPF3Q9ULD4 1205 aa21.06■□□□□ 0.96
SMPD4-210ENST00000441135 SZT2Q5T011 3432 aa21.06■□□□□ 0.96
SMPD4-210ENST00000441135 KLF18A0A0U1RQI7 1052 aa21.05■□□□□ 0.96
SMPD4-210ENST00000441135 PPP1R11O60927 126 aaPredicted RBP21.05■□□□□ 0.96
SMPD4-210ENST00000441135 TIMP1P01033 207 aa21.05■□□□□ 0.96
SMPD4-210ENST00000441135 EVCP57679 992 aa21.05■□□□□ 0.96
SMPD4-210ENST00000441135 FPGSQ05932 587 aa21.05■□□□□ 0.96
SMPD4-210ENST00000441135 ITGA7Q13683 1181 aa21.05■□□□□ 0.96
SMPD4-210ENST00000441135 Q6ZUG5 572 aa21.05■□□□□ 0.96
SMPD4-210ENST00000441135 SRBD1Q8N5C6 995 aaKnown RBP21.05■□□□□ 0.96
SMPD4-210ENST00000441135 SLC43A3Q8NBI5 491 aa21.05■□□□□ 0.96
SMPD4-210ENST00000441135 TBC1D5Q92609 795 aa21.05■□□□□ 0.96
SMPD4-210ENST00000441135 RRP36Q96EU6 259 aaKnown RBP21.05■□□□□ 0.96
SMPD4-210ENST00000441135 RMDN3Q96TC7 470 aa21.05■□□□□ 0.96
SMPD4-210ENST00000441135 POLR3EQ9NVU0 708 aa21.05■□□□□ 0.96
SMPD4-210ENST00000441135 COL20A1Q9P218 1284 aa21.05■□□□□ 0.96
SMPD4-210ENST00000441135 PCDHA1Q9Y5I3 950 aa21.05■□□□□ 0.96
SMPD4-210ENST00000441135 CYP46A1Q9Y6A2 500 aa21.05■□□□□ 0.96
SMPD4-210ENST00000441135 PLEKHA8P1O95397 391 aa21.04■□□□□ 0.96
SMPD4-210ENST00000441135 CPA1P15085 419 aa21.04■□□□□ 0.96
SMPD4-210ENST00000441135 RXRAP19793 462 aa21.04■□□□□ 0.96
SMPD4-210ENST00000441135 HSD17B4P51659 736 aa21.04■□□□□ 0.96
SMPD4-210ENST00000441135 TTLL4Q14679 1199 aa21.04■□□□□ 0.96
SMPD4-210ENST00000441135 SHHQ15465 462 aa21.04■□□□□ 0.96
SMPD4-210ENST00000441135 RTN1Q16799 776 aa21.04■□□□□ 0.96
SMPD4-210ENST00000441135 HOMER1Q86YM7 354 aa21.04■□□□□ 0.96
SMPD4-210ENST00000441135 OR6J1Q8NGC5 347 aa21.04■□□□□ 0.96
SMPD4-210ENST00000441135 TAAR1Q96RJ0 339 aa21.04■□□□□ 0.96
SMPD4-210ENST00000441135 SEC63Q9UGP8 760 aaKnown RBP21.04■□□□□ 0.96
SMPD4-210ENST00000441135 CCDC196A0A1B0GTZ2 297 aa21.03■□□□□ 0.96
SMPD4-210ENST00000441135 CFBP00751 764 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms