RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 ACLYP53396 1101 aa27.34■■□□□ 1.97
VARS-217ENST00000440048 NKX3-2P78367 333 aa27.34■■□□□ 1.97
VARS-217ENST00000440048 CHRDL2Q6WN34 429 aa27.34■■□□□ 1.97
VARS-217ENST00000440048 TLK2Q86UE8 772 aa27.34■■□□□ 1.97
VARS-217ENST00000440048 CCDC82Q8N4S0 544 aa27.34■■□□□ 1.97
VARS-217ENST00000440048 RBM28Q9NW13 759 aaKnown RBP27.34■■□□□ 1.97
VARS-217ENST00000440048 A0A1W2PQ45 241 aaPredicted RBP27.33■■□□□ 1.97
VARS-217ENST00000440048 A0A1W2PQY0 241 aa27.33■■□□□ 1.97
VARS-217ENST00000440048 GCOM1H8Y6P7 765 aaPredicted RBP27.33■■□□□ 1.97
VARS-217ENST00000440048 POLR2MP0CAP2 368 aa27.33■■□□□ 1.97
VARS-217ENST00000440048 RTP1P59025 263 aa27.33■■□□□ 1.97
VARS-217ENST00000440048 RTN1Q16799 776 aa27.33■■□□□ 1.97
VARS-217ENST00000440048 GNASQ5JWF2 1037 aa27.33■■□□□ 1.97
VARS-217ENST00000440048 ARHGEF16Q5VV41 709 aa27.33■■□□□ 1.97
VARS-217ENST00000440048 IWS1Q96ST2 819 aa27.33■■□□□ 1.97
VARS-217ENST00000440048 WDR11Q9BZH6 1224 aa27.33■■□□□ 1.97
VARS-217ENST00000440048 PXMP2Q9NR77 195 aa27.33■■□□□ 1.97
VARS-217ENST00000440048 ZMYND8Q9ULU4 1186 aaPredicted RBP27.33■■□□□ 1.97
VARS-217ENST00000440048 MOXD2PA6NHM9 499 aa27.32■■□□□ 1.96
VARS-217ENST00000440048 DYNC1LI2O43237 492 aaPredicted RBP27.32■■□□□ 1.96
VARS-217ENST00000440048 EIF2AK2P19525 551 aaKnown RBP27.32■■□□□ 1.96
VARS-217ENST00000440048 APOBRQ0VD83 1088 aa27.32■■□□□ 1.96
VARS-217ENST00000440048 SNX17Q15036 470 aa27.32■■□□□ 1.96
VARS-217ENST00000440048 DUSP28Q4G0W2 176 aa27.32■■□□□ 1.96
VARS-217ENST00000440048 PCSK9Q8NBP7 692 aaKnown RBP27.32■■□□□ 1.96
VARS-217ENST00000440048 BRF1Q92994 677 aa27.32■■□□□ 1.96
VARS-217ENST00000440048 AP5M1Q9H0R1 490 aa27.32■■□□□ 1.96
VARS-217ENST00000440048 NAP1L2Q9ULW6 460 aaPredicted RBP27.32■■□□□ 1.96
VARS-217ENST00000440048 Q9Y3F1 56 aa27.32■■□□□ 1.96
VARS-217ENST00000440048 KIAA1217Q5T5P2 1943 aa27.31■■□□□ 1.96
VARS-217ENST00000440048 hCG_1642624A0A1W2PR95 340 aa27.31■■□□□ 1.96
VARS-217ENST00000440048 GOLGA8AA7E2F4 631 aa27.31■■□□□ 1.96
VARS-217ENST00000440048 GOLGA8BA8MQT2 603 aa27.31■■□□□ 1.96
VARS-217ENST00000440048 RCAN1P53805 252 aa27.31■■□□□ 1.96
VARS-217ENST00000440048 BEX3Q00994 111 aa27.31■■□□□ 1.96
VARS-217ENST00000440048 FBXL16Q8N461 479 aa27.31■■□□□ 1.96
VARS-217ENST00000440048 ASGR1P07306 291 aa27.3■■□□□ 1.96
VARS-217ENST00000440048 SYN1P17600 705 aa27.3■■□□□ 1.96
VARS-217ENST00000440048 SCFD2Q8WU76 684 aa27.3■■□□□ 1.96
VARS-217ENST00000440048 AGXT2Q9BYV1 514 aa27.3■■□□□ 1.96
VARS-217ENST00000440048 ZSWIM6Q9HCJ5 1215 aa27.3■■□□□ 1.96
VARS-217ENST00000440048 FAM217BQ9NTX9 383 aaPredicted RBP27.3■■□□□ 1.96
VARS-217ENST00000440048 ATP11BQ9Y2G3 1177 aa27.3■■□□□ 1.96
VARS-217ENST00000440048 CNTNAP5Q8WYK1 1306 aa27.3■■□□□ 1.96
VARS-217ENST00000440048 NR3C2P08235 984 aa27.29■■□□□ 1.96
VARS-217ENST00000440048 FUT2Q10981 343 aa27.29■■□□□ 1.96
VARS-217ENST00000440048 STXBP2Q15833 593 aa27.29■■□□□ 1.96
VARS-217ENST00000440048 FSCN1Q16658 493 aaKnown RBP27.29■■□□□ 1.96
VARS-217ENST00000440048 TRIM60Q495X7 471 aa27.29■■□□□ 1.96
VARS-217ENST00000440048 C1orf53Q5VUE5 145 aa27.29■■□□□ 1.96
VARS-217ENST00000440048 RUFY3Q7L099 469 aa27.29■■□□□ 1.96
VARS-217ENST00000440048 FCHSD1Q86WN1 690 aa27.29■■□□□ 1.96
VARS-217ENST00000440048 PDCD2LQ9BRP1 358 aa27.29■■□□□ 1.96
VARS-217ENST00000440048 A0A1W2PPC1 479 aa27.28■■□□□ 1.96
VARS-217ENST00000440048 CDC27P30260 824 aa27.28■■□□□ 1.96
VARS-217ENST00000440048 PPP2R5BQ15173 497 aa27.28■■□□□ 1.96
VARS-217ENST00000440048 TM6SF1Q9BZW5 370 aa27.28■■□□□ 1.96
VARS-217ENST00000440048 PRO3102Q9H379 93 aa27.28■■□□□ 1.96
VARS-217ENST00000440048 STARD7Q9NQZ5 370 aa27.28■■□□□ 1.96
VARS-217ENST00000440048 RBM27Q9P2N5 1060 aaKnown RBP27.28■■□□□ 1.96
VARS-217ENST00000440048 METAP2P50579 478 aaKnown RBP eCLIP27.27■■□□□ 1.961e-6■■■□□ 15.2
VARS-217ENST00000440048 SEPT14Q6ZU15 432 aa27.27■■□□□ 1.96
VARS-217ENST00000440048 GLT1D1Q96MS3 346 aa27.27■■□□□ 1.96
VARS-217ENST00000440048 CYP46A1Q9Y6A2 500 aa27.27■■□□□ 1.96
VARS-217ENST00000440048 NKRFO15226 690 aaKnown RBP eCLIP27.26■■□□□ 1.95
VARS-217ENST00000440048 EIF3JO75822 258 aaKnown RBP27.26■■□□□ 1.95
VARS-217ENST00000440048 ARIH2O95376 493 aa27.26■■□□□ 1.95
VARS-217ENST00000440048 TXNP10599 105 aaKnown RBP27.26■■□□□ 1.95
VARS-217ENST00000440048 TTLL4Q14679 1199 aa27.26■■□□□ 1.95
VARS-217ENST00000440048 IL31RAQ8NI17 732 aa27.26■■□□□ 1.95
VARS-217ENST00000440048 ELP1O95163 1332 aa27.25■■□□□ 1.95
VARS-217ENST00000440048 MYCLP12524 364 aaPredicted RBP27.25■■□□□ 1.95
VARS-217ENST00000440048 ADD1P35611 737 aaKnown RBP27.25■■□□□ 1.95
VARS-217ENST00000440048 FXR1P51114 621 aaKnown RBP eCLIP27.25■■□□□ 1.95
VARS-217ENST00000440048 PGM5Q15124 567 aa27.25■■□□□ 1.95
VARS-217ENST00000440048 CCDC62Q6P9F0 684 aa27.25■■□□□ 1.95
VARS-217ENST00000440048 USP17L6PQ6QN14 398 aa27.25■■□□□ 1.95
VARS-217ENST00000440048 HEATR3Q7Z4Q2 680 aa27.25■■□□□ 1.95
VARS-217ENST00000440048 VSIG10LQ86VR7 867 aa27.25■■□□□ 1.95
VARS-217ENST00000440048 OR6J1Q8NGC5 347 aa27.25■■□□□ 1.95
VARS-217ENST00000440048 COPS5Q92905 334 aa27.25■■□□□ 1.95
VARS-217ENST00000440048 GPKOWQ92917 476 aaPredicted RBP eCLIP27.25■■□□□ 1.95
VARS-217ENST00000440048 PCDH10Q9P2E7 1040 aa27.25■■□□□ 1.95
VARS-217ENST00000440048 V9GY48 417 aaPredicted RBP27.25■■□□□ 1.95
VARS-217ENST00000440048 NID2Q14112 1375 aa27.24■■□□□ 1.95
VARS-217ENST00000440048 PIK3CDO00329 1044 aa27.24■■□□□ 1.95
VARS-217ENST00000440048 MEIS2O14770 477 aa27.24■■□□□ 1.95
VARS-217ENST00000440048 ZEB2O60315 1214 aa27.24■■□□□ 1.95
VARS-217ENST00000440048 TLE2Q04725 743 aa27.24■■□□□ 1.95
VARS-217ENST00000440048 CXCL17Q6UXB2 119 aa27.24■■□□□ 1.95
VARS-217ENST00000440048 SMARCC2Q8TAQ2 1214 aa27.24■■□□□ 1.95
VARS-217ENST00000440048 CUL5Q93034 780 aa27.24■■□□□ 1.95
VARS-217ENST00000440048 VTI1AQ96AJ9 217 aa27.24■■□□□ 1.95
VARS-217ENST00000440048 UPF3BQ9BZI7 483 aaKnown RBP27.24■■□□□ 1.95
VARS-217ENST00000440048 CCDC196A0A1B0GTZ2 297 aa27.23■■□□□ 1.95
VARS-217ENST00000440048 BMP8BP34820 402 aa27.23■■□□□ 1.95
VARS-217ENST00000440048 EVCP57679 992 aa27.23■■□□□ 1.95
VARS-217ENST00000440048 TOB2Q14106 344 aaPredicted RBP27.23■■□□□ 1.95
VARS-217ENST00000440048 PSTPIP2Q9H939 334 aa27.23■■□□□ 1.95
VARS-217ENST00000440048 FRMPD4Q14CM0 1322 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms