RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 HOXA13P31271 388 aaPredicted RBP16.81■□□□□ 0.28
IFT140-204ENST00000439987 SREBF1P36956 1147 aa16.81■□□□□ 0.28
IFT140-204ENST00000439987 SAMD1Q6SPF0 538 aaPredicted RBP16.81■□□□□ 0.28
IFT140-204ENST00000439987 LRRC15Q8TF66 581 aa16.81■□□□□ 0.28
IFT140-204ENST00000439987 WRNIP1Q96S55 665 aa16.81■□□□□ 0.28
IFT140-204ENST00000439987 KBTBD4Q9NVX7 518 aa16.81■□□□□ 0.28
IFT140-204ENST00000439987 RNF181Q9P0P0 153 aa16.81■□□□□ 0.28
IFT140-204ENST00000439987 MYL1P05976 194 aa16.8■□□□□ 0.28
IFT140-204ENST00000439987 LMOD1P29536 600 aaPredicted RBP16.8■□□□□ 0.28
IFT140-204ENST00000439987 CT47A1Q5JQC4 288 aaPredicted RBP16.8■□□□□ 0.28
IFT140-204ENST00000439987 DRC7Q8IY82 874 aa16.8■□□□□ 0.28
IFT140-204ENST00000439987 CALML4Q96GE6 196 aa16.8■□□□□ 0.28
IFT140-204ENST00000439987 POTEMA6NI47 508 aa16.8■□□□□ 0.28
IFT140-204ENST00000439987 MTMR2Q13614 643 aa16.8■□□□□ 0.28
IFT140-204ENST00000439987 PRPF38AQ8NAV1 312 aaKnown RBP16.8■□□□□ 0.28
IFT140-204ENST00000439987 ZKSCAN4Q969J2 545 aaPredicted RBP16.8■□□□□ 0.28
IFT140-204ENST00000439987 KCNMB3Q9NPA1 279 aa16.8■□□□□ 0.28
IFT140-204ENST00000439987 MRPL11Q9Y3B7 192 aaKnown RBP16.8■□□□□ 0.28
IFT140-204ENST00000439987 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.8■□□□□ 0.28
IFT140-204ENST00000439987 MARCH6O60337 910 aa16.79■□□□□ 0.28
IFT140-204ENST00000439987 YBX3P16989 372 aaKnown RBP eCLIP16.79■□□□□ 0.28
IFT140-204ENST00000439987 ERCC5P28715 1186 aaPredicted RBP16.79■□□□□ 0.28
IFT140-204ENST00000439987 FMR1Q06787 632 aaKnown RBP eCLIP16.79■□□□□ 0.28
IFT140-204ENST00000439987 LDHDQ86WU2 507 aa16.79■□□□□ 0.28
IFT140-204ENST00000439987 ENOX1Q8TC92 643 aaKnown RBP16.79■□□□□ 0.28
IFT140-204ENST00000439987 SLF1Q9BQI6 1058 aa16.79■□□□□ 0.28
IFT140-204ENST00000439987 WDR18Q9BV38 432 aa16.79■□□□□ 0.28
IFT140-204ENST00000439987 PCDHA12Q9UN75 941 aa16.79■□□□□ 0.28
IFT140-204ENST00000439987 ABCB11O95342 1321 aa16.79■□□□□ 0.28
IFT140-204ENST00000439987 CFBP00751 764 aa16.79■□□□□ 0.28
IFT140-204ENST00000439987 RPN1P04843 607 aaKnown RBP16.79■□□□□ 0.28
IFT140-204ENST00000439987 USP14P54578 494 aa16.79■□□□□ 0.28
IFT140-204ENST00000439987 DMTNQ08495 405 aa16.79■□□□□ 0.28
IFT140-204ENST00000439987 DGKZQ13574 1117 aa16.79■□□□□ 0.28
IFT140-204ENST00000439987 PICK1Q9NRD5 415 aa16.79■□□□□ 0.28
IFT140-204ENST00000439987 RMND1Q9NWS8 449 aa16.79■□□□□ 0.28
IFT140-204ENST00000439987 PITPNM2Q9BZ72 1349 aa16.78■□□□□ 0.28
IFT140-204ENST00000439987 TPM3P06753 285 aa16.78■□□□□ 0.28
IFT140-204ENST00000439987 PTPRAP18433 802 aa16.78■□□□□ 0.28
IFT140-204ENST00000439987 SPP2Q13103 211 aa16.78■□□□□ 0.28
IFT140-204ENST00000439987 GJA10Q969M2 543 aa16.78■□□□□ 0.28
IFT140-204ENST00000439987 EMILIN3Q9NT22 766 aa16.78■□□□□ 0.28
IFT140-204ENST00000439987 FANCLQ9NW38 375 aa16.78■□□□□ 0.28
IFT140-204ENST00000439987 FZD1Q9UP38 647 aa16.78■□□□□ 0.28
IFT140-204ENST00000439987 GCOM1H8Y6P7 765 aaPredicted RBP16.78■□□□□ 0.28
IFT140-204ENST00000439987 ICAM1P05362 532 aa16.78■□□□□ 0.28
IFT140-204ENST00000439987 POLR2MP0CAP2 368 aa16.78■□□□□ 0.28
IFT140-204ENST00000439987 ATP1A3P13637 1013 aa16.78■□□□□ 0.28
IFT140-204ENST00000439987 VCAM1P19320 739 aa16.78■□□□□ 0.28
IFT140-204ENST00000439987 GTF2F1P35269 517 aaKnown RBP eCLIP16.78■□□□□ 0.28
IFT140-204ENST00000439987 GRB10Q13322 594 aa16.78■□□□□ 0.28
IFT140-204ENST00000439987 Q4G0T1 1027 aa16.78■□□□□ 0.28
IFT140-204ENST00000439987 KRT79Q5XKE5 535 aa16.78■□□□□ 0.28
IFT140-204ENST00000439987 TBC1D5Q92609 795 aa16.78■□□□□ 0.28
IFT140-204ENST00000439987 KLRG1Q96E93 195 aa16.78■□□□□ 0.28
IFT140-204ENST00000439987 ZNF830Q96NB3 372 aaPredicted RBP16.78■□□□□ 0.28
IFT140-204ENST00000439987 TANGO6Q9C0B7 1094 aa16.78■□□□□ 0.28
IFT140-204ENST00000439987 AS3MTQ9HBK9 375 aa16.78■□□□□ 0.28
IFT140-204ENST00000439987 ADARB2Q9NS39 739 aaKnown RBP16.78■□□□□ 0.28
IFT140-204ENST00000439987 SSC5DA1L4H1 1573 aa16.77■□□□□ 0.28
IFT140-204ENST00000439987 CD44P16070 742 aaKnown RBP16.77■□□□□ 0.28
IFT140-204ENST00000439987 CIITAP33076 1130 aa16.77■□□□□ 0.28
IFT140-204ENST00000439987 SUPT20HL1Q3ZLR7 823 aa16.77■□□□□ 0.28
IFT140-204ENST00000439987 PRR16Q569H4 304 aa16.77■□□□□ 0.28
IFT140-204ENST00000439987 FCHSD1Q86WN1 690 aa16.77■□□□□ 0.28
IFT140-204ENST00000439987 SLFN12Q8IYM2 578 aa16.77■□□□□ 0.28
IFT140-204ENST00000439987 SMYD4Q8IYR2 804 aaPredicted RBP16.77■□□□□ 0.28
IFT140-204ENST00000439987 SNX29Q8TEQ0 813 aa16.77■□□□□ 0.28
IFT140-204ENST00000439987 MED15Q96RN5 788 aa16.77■□□□□ 0.28
IFT140-204ENST00000439987 IFNKQ9P0W0 207 aa16.77■□□□□ 0.28
IFT140-204ENST00000439987 POLR2AP24928 1970 aaKnown RBP16.77■□□□□ 0.27
IFT140-204ENST00000439987 ZNF536O15090 1300 aa16.77■□□□□ 0.27
IFT140-204ENST00000439987 PPP1R3GB7ZBB8 358 aa16.77■□□□□ 0.27
IFT140-204ENST00000439987 CYP3A4P08684 503 aa16.77■□□□□ 0.27
IFT140-204ENST00000439987 BACE1P56817 501 aa16.77■□□□□ 0.27
IFT140-204ENST00000439987 FANCCQ00597 558 aa16.77■□□□□ 0.27
IFT140-204ENST00000439987 TRMT44Q8IYL2 757 aaKnown RBP16.77■□□□□ 0.27
IFT140-204ENST00000439987 ZNF280CQ8ND82 737 aa16.77■□□□□ 0.27
IFT140-204ENST00000439987 CDK5RAP3Q96JB5 506 aa16.77■□□□□ 0.27
IFT140-204ENST00000439987 PNMA5Q96PV4 448 aa16.77■□□□□ 0.27
IFT140-204ENST00000439987 STK17AQ9UEE5 414 aa16.77■□□□□ 0.27
IFT140-204ENST00000439987 CCPG1Q9ULG6 757 aa16.77■□□□□ 0.27
IFT140-204ENST00000439987 NFE2L3Q9Y4A8 694 aa16.77■□□□□ 0.27
IFT140-204ENST00000439987 FAM86B1E9PN63 330 aa16.76■□□□□ 0.27
IFT140-204ENST00000439987 TBX3O15119 743 aa16.76■□□□□ 0.27
IFT140-204ENST00000439987 FAM86B2P0C5J1 330 aa16.76■□□□□ 0.27
IFT140-204ENST00000439987 ZNF658Q5TYW1 1059 aaPredicted RBP16.76■□□□□ 0.27
IFT140-204ENST00000439987 ETNPPLQ8TBG4 499 aa16.76■□□□□ 0.27
IFT140-204ENST00000439987 LENG9Q96B70 501 aa16.76■□□□□ 0.27
IFT140-204ENST00000439987 AGBL1Q96MI9 1066 aa16.76■□□□□ 0.27
IFT140-204ENST00000439987 XPO4Q9C0E2 1151 aaKnown RBP16.76■□□□□ 0.27
IFT140-204ENST00000439987 NRBP1Q9UHY1 535 aa16.76■□□□□ 0.27
IFT140-204ENST00000439987 FLOT1O75955 427 aa16.76■□□□□ 0.27
IFT140-204ENST00000439987 KCNB1Q14721 858 aa16.76■□□□□ 0.27
IFT140-204ENST00000439987 C9orf131Q5VYM1 1079 aa16.76■□□□□ 0.27
IFT140-204ENST00000439987 CCDC186Q7Z3E2 898 aa16.76■□□□□ 0.27
IFT140-204ENST00000439987 NUDT12Q9BQG2 462 aa16.76■□□□□ 0.27
IFT140-204ENST00000439987 RPAP3Q9H6T3 665 aaPredicted RBP16.76■□□□□ 0.27
IFT140-204ENST00000439987 KLRC4O43908 158 aa16.75■□□□□ 0.27
IFT140-204ENST00000439987 AMPD3Q01432 767 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms