RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 RGS22Q8NE09 1264 aa18.7■□□□□ 0.58
ITGB1-207ENST00000439974 MAF1Q9H063 256 aa18.7■□□□□ 0.58
ITGB1-207ENST00000439974 POLR3EQ9NVU0 708 aa18.7■□□□□ 0.58
ITGB1-207ENST00000439974 B4DLN1 442 aa18.69■□□□□ 0.58
ITGB1-207ENST00000439974 NKRFO15226 690 aaKnown RBP eCLIP18.69■□□□□ 0.58
ITGB1-207ENST00000439974 PRC1O43663 620 aa18.69■□□□□ 0.58
ITGB1-207ENST00000439974 CYP2C18P33260 490 aa18.69■□□□□ 0.58
ITGB1-207ENST00000439974 MRPL12P52815 198 aaKnown RBP18.69■□□□□ 0.58
ITGB1-207ENST00000439974 PSMC6P62333 389 aa18.69■□□□□ 0.58
ITGB1-207ENST00000439974 PPP2R5BQ15173 497 aa18.69■□□□□ 0.58
ITGB1-207ENST00000439974 ADCK5Q3MIX3 580 aa18.69■□□□□ 0.58
ITGB1-207ENST00000439974 TMEM67Q5HYA8 995 aa18.69■□□□□ 0.58
ITGB1-207ENST00000439974 OR6J1Q8NGC5 347 aa18.69■□□□□ 0.58
ITGB1-207ENST00000439974 TCEANC2Q96MN5 208 aa18.69■□□□□ 0.58
ITGB1-207ENST00000439974 HIPK3Q9H422 1215 aa18.69■□□□□ 0.58
ITGB1-207ENST00000439974 ABCB11O95342 1321 aa18.69■□□□□ 0.58
ITGB1-207ENST00000439974 UNC80Q8N2C7 3258 aa18.69■□□□□ 0.58
ITGB1-207ENST00000439974 MYH6P13533 1939 aa18.68■□□□□ 0.58
ITGB1-207ENST00000439974 B4GALT4O60513 344 aa18.68■□□□□ 0.58
ITGB1-207ENST00000439974 CPA1P15085 419 aa18.68■□□□□ 0.58
ITGB1-207ENST00000439974 DNAJB2P25686 324 aa18.68■□□□□ 0.58
ITGB1-207ENST00000439974 BRDTQ58F21 947 aaPredicted RBP18.68■□□□□ 0.58
ITGB1-207ENST00000439974 RASIP1Q5U651 963 aa18.68■□□□□ 0.58
ITGB1-207ENST00000439974 ZNF365Q70YC5 407 aa18.68■□□□□ 0.58
ITGB1-207ENST00000439974 ADGRF4Q8IZF3 695 aa18.68■□□□□ 0.58
ITGB1-207ENST00000439974 SCFD2Q8WU76 684 aa18.68■□□□□ 0.58
ITGB1-207ENST00000439974 MYLIPQ8WY64 445 aa18.68■□□□□ 0.58
ITGB1-207ENST00000439974 IL23AQ9NPF7 189 aa18.68■□□□□ 0.58
ITGB1-207ENST00000439974 MYL3P08590 195 aa18.67■□□□□ 0.58
ITGB1-207ENST00000439974 PARP1P09874 1014 aaKnown RBP18.67■□□□□ 0.58
ITGB1-207ENST00000439974 ACRP10323 421 aa18.67■□□□□ 0.58
ITGB1-207ENST00000439974 PURAQ00577 322 aaKnown RBP18.67■□□□□ 0.58
ITGB1-207ENST00000439974 WTAPQ15007 396 aa18.67■□□□□ 0.58
ITGB1-207ENST00000439974 RNF20Q5VTR2 975 aa18.67■□□□□ 0.58
ITGB1-207ENST00000439974 RAB11FIP4Q86YS3 637 aa18.67■□□□□ 0.58
ITGB1-207ENST00000439974 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.67■□□□□ 0.58
ITGB1-207ENST00000439974 NOC4LQ9BVI4 516 aaKnown RBP18.67■□□□□ 0.58
ITGB1-207ENST00000439974 TRPV6Q9H1D0 765 aa18.67■□□□□ 0.58
ITGB1-207ENST00000439974 ERICH2A1L162 156 aa18.66■□□□□ 0.58
ITGB1-207ENST00000439974 DHX16O60231 1041 aaKnown RBP18.66■□□□□ 0.58
ITGB1-207ENST00000439974 REC8O95072 547 aa18.66■□□□□ 0.58
ITGB1-207ENST00000439974 QRICH1Q2TAL8 776 aa18.66■□□□□ 0.58
ITGB1-207ENST00000439974 MAFAQ8NHW3 353 aaPredicted RBP18.66■□□□□ 0.58
ITGB1-207ENST00000439974 IGDCC4Q8TDY8 1250 aa18.66■□□□□ 0.58
ITGB1-207ENST00000439974 TIFAQ96CG3 184 aa18.66■□□□□ 0.58
ITGB1-207ENST00000439974 MTG1Q9BT17 334 aaPredicted RBP18.66■□□□□ 0.58
ITGB1-207ENST00000439974 MYL10Q9BUA6 226 aa18.66■□□□□ 0.58
ITGB1-207ENST00000439974 ALDH8A1Q9H2A2 487 aaPredicted RBP18.66■□□□□ 0.58
ITGB1-207ENST00000439974 MTIF3Q9H2K0 278 aaKnown RBP18.66■□□□□ 0.58
ITGB1-207ENST00000439974 LY9Q9HBG7 655 aa18.66■□□□□ 0.58
ITGB1-207ENST00000439974 UMODL1Q5DID0 1318 aa18.66■□□□□ 0.58
ITGB1-207ENST00000439974 CUL9Q8IWT3 2517 aa18.66■□□□□ 0.58
ITGB1-207ENST00000439974 EYSQ5T1H1 3165 aa18.66■□□□□ 0.58
ITGB1-207ENST00000439974 SCN10AQ9Y5Y9 1956 aa18.66■□□□□ 0.58
ITGB1-207ENST00000439974 SUPT20HL2P0C7V6 817 aa18.65■□□□□ 0.58
ITGB1-207ENST00000439974 TXNP10599 105 aaKnown RBP18.65■□□□□ 0.58
ITGB1-207ENST00000439974 FOSL2P15408 326 aa18.65■□□□□ 0.58
ITGB1-207ENST00000439974 MCM5P33992 734 aa18.65■□□□□ 0.58
ITGB1-207ENST00000439974 HSPA4P34932 840 aa18.65■□□□□ 0.58
ITGB1-207ENST00000439974 CCL23P55773 120 aa18.65■□□□□ 0.58
ITGB1-207ENST00000439974 TTLL4Q14679 1199 aa18.65■□□□□ 0.58
ITGB1-207ENST00000439974 FBXO11Q86XK2 927 aa18.65■□□□□ 0.58
ITGB1-207ENST00000439974 MCF2L2Q86YR7 1114 aa18.65■□□□□ 0.58
ITGB1-207ENST00000439974 STAG2Q8N3U4 1231 aa18.65■□□□□ 0.58
ITGB1-207ENST00000439974 SYTL5Q8TDW5 730 aaPredicted RBP18.65■□□□□ 0.58
ITGB1-207ENST00000439974 HERVK_113Q902F9 699 aa18.65■□□□□ 0.58
ITGB1-207ENST00000439974 TBC1D5Q92609 795 aa18.65■□□□□ 0.58
ITGB1-207ENST00000439974 NEK1Q96PY6 1258 aa18.65■□□□□ 0.58
ITGB1-207ENST00000439974 MRPL11Q9Y3B7 192 aaKnown RBP18.65■□□□□ 0.58
ITGB1-207ENST00000439974 SNX14Q9Y5W7 946 aa18.65■□□□□ 0.58
ITGB1-207ENST00000439974 A6NJR5 290 aa18.64■□□□□ 0.57
ITGB1-207ENST00000439974 SH2B2O14492 632 aaPredicted RBP18.64■□□□□ 0.57
ITGB1-207ENST00000439974 KPNA6O60684 536 aa18.64■□□□□ 0.57
ITGB1-207ENST00000439974 FGBP02675 491 aa18.64■□□□□ 0.57
ITGB1-207ENST00000439974 SART3Q15020 963 aaKnown RBP18.64■□□□□ 0.57
ITGB1-207ENST00000439974 NSUN6Q8TEA1 469 aaKnown RBP18.64■□□□□ 0.57
ITGB1-207ENST00000439974 COPS5Q92905 334 aa18.64■□□□□ 0.57
ITGB1-207ENST00000439974 JAKMIP1Q96N16 626 aaKnown RBP18.64■□□□□ 0.57
ITGB1-207ENST00000439974 WNT8AQ9H1J5 351 aa18.64■□□□□ 0.57
ITGB1-207ENST00000439974 JMJD4Q9H9V9 463 aa18.64■□□□□ 0.57
ITGB1-207ENST00000439974 VAT1LQ9HCJ6 419 aa18.64■□□□□ 0.57
ITGB1-207ENST00000439974 TRMT13Q9NUP7 481 aaKnown RBP18.64■□□□□ 0.57
ITGB1-207ENST00000439974 GRXCR1A8MXD5 290 aa18.63■□□□□ 0.57
ITGB1-207ENST00000439974 ARIH2O95376 493 aa18.63■□□□□ 0.57
ITGB1-207ENST00000439974 RXRAP19793 462 aa18.63■□□□□ 0.57
ITGB1-207ENST00000439974 GRIN2CQ14957 1233 aa18.63■□□□□ 0.57
ITGB1-207ENST00000439974 NFXL1Q6ZNB6 911 aa18.63■□□□□ 0.57
ITGB1-207ENST00000439974 RPUSD2Q8IZ73 545 aaKnown RBP18.63■□□□□ 0.57
ITGB1-207ENST00000439974 TAAR1Q96RJ0 339 aa18.63■□□□□ 0.57
ITGB1-207ENST00000439974 IWS1Q96ST2 819 aa18.63■□□□□ 0.57
ITGB1-207ENST00000439974 USP26Q9BXU7 913 aa18.63■□□□□ 0.57
ITGB1-207ENST00000439974 PBX4Q9BYU1 374 aa18.63■□□□□ 0.57
ITGB1-207ENST00000439974 ZNF576Q9H609 170 aa18.63■□□□□ 0.57
ITGB1-207ENST00000439974 COL20A1Q9P218 1284 aa18.63■□□□□ 0.57
ITGB1-207ENST00000439974 GTF3C3Q9Y5Q9 886 aa18.63■□□□□ 0.57
ITGB1-207ENST00000439974 MYO9BQ13459 2157 aa18.63■□□□□ 0.57
ITGB1-207ENST00000439974 SEC24BO95487 1268 aa18.62■□□□□ 0.57
ITGB1-207ENST00000439974 NBPF20Q3BBV1 942 aa18.62■□□□□ 0.57
ITGB1-207ENST00000439974 FAM47CQ5HY64 1035 aa18.62■□□□□ 0.57
ITGB1-207ENST00000439974 CCDC62Q6P9F0 684 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms