RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 CACNB2Q08289 660 aaPredicted RBP5.41□□□□□ -1.54
EDEM3-203ENST00000439962 WTAPQ15007 396 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 RCSD1Q6JBY9 416 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 RNF214Q8ND24 703 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 LPAR1Q92633 364 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 TRERF1Q96PN7 1200 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.41□□□□□ -1.54
EDEM3-203ENST00000439962 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.41□□□□□ -1.54
EDEM3-203ENST00000439962 PTPRFP10586 1907 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 CMA1P23946 247 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 ZNF75DP51815 510 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 TPM4P67936 248 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 CEP57L1Q8IYX8 460 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 STAG1Q8WVM7 1258 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 ZNF333Q96JL9 665 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 C8orf76Q96K31 380 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 SENP6Q9GZR1 1112 aaPredicted RBP5.41□□□□□ -1.54
EDEM3-203ENST00000439962 CBX8Q9HC52 389 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 RNF146Q9NTX7 359 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 PKD2L1Q9P0L9 805 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 NYAP2Q9P242 653 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 ANAPC4Q9UJX5 808 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 ZMYND8Q9ULU4 1186 aaPredicted RBP5.41□□□□□ -1.54
EDEM3-203ENST00000439962 MYH6P13533 1939 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 CCDC196A0A1B0GTZ2 297 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 CCDC69A6NI79 296 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 SMTNL1A8MU46 457 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 SH2B2O14492 632 aaPredicted RBP5.41□□□□□ -1.54
EDEM3-203ENST00000439962 IKBKBO14920 756 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 JAK2O60674 1132 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 TOP1P11387 765 aaKnown RBP5.41□□□□□ -1.54
EDEM3-203ENST00000439962 MAPK4P31152 587 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 ZNF165P49910 485 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 APOBRQ0VD83 1088 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 SEMA3FQ13275 785 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 SNW1Q13573 536 aaKnown RBP5.41□□□□□ -1.54
EDEM3-203ENST00000439962 IQCB1Q15051 598 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 FMR1NBQ8N0W7 255 aaPredicted RBP5.41□□□□□ -1.54
EDEM3-203ENST00000439962 LINC00301Q8NCQ3 95 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 TEX13BQ9BXU2 312 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 HMX1Q9NP08 348 aaPredicted RBP5.41□□□□□ -1.54
EDEM3-203ENST00000439962 GJD2Q9UKL4 321 aa5.41□□□□□ -1.54
EDEM3-203ENST00000439962 ZNF214Q9UL59 606 aaPredicted RBP5.41□□□□□ -1.54
EDEM3-203ENST00000439962 PHIPQ8WWQ0 1821 aa5.4□□□□□ -1.54
EDEM3-203ENST00000439962 KLRF2D3W0D1 207 aa5.4□□□□□ -1.54
EDEM3-203ENST00000439962 GOLGA6L19H0YKK7 550 aa5.4□□□□□ -1.54
EDEM3-203ENST00000439962 PLEKHA8P1O95397 391 aa5.4□□□□□ -1.54
EDEM3-203ENST00000439962 PARP1P09874 1014 aaKnown RBP5.4□□□□□ -1.54
EDEM3-203ENST00000439962 U2AF2P26368 475 aaKnown RBP eCLIP5.4□□□□□ -1.54
EDEM3-203ENST00000439962 RGS2P41220 211 aa5.4□□□□□ -1.54
EDEM3-203ENST00000439962 BAATQ14032 418 aaPredicted RBP5.4□□□□□ -1.54
EDEM3-203ENST00000439962 SART3Q15020 963 aaKnown RBP5.4□□□□□ -1.54
EDEM3-203ENST00000439962 PKN2Q16513 984 aaKnown RBP5.4□□□□□ -1.54
EDEM3-203ENST00000439962 ANO6Q4KMQ2 910 aa5.4□□□□□ -1.54
EDEM3-203ENST00000439962 SYDE2Q5VT97 1194 aa5.4□□□□□ -1.54
EDEM3-203ENST00000439962 FBXO16Q8IX29 292 aaPredicted RBP5.4□□□□□ -1.54
EDEM3-203ENST00000439962 ADGRF4Q8IZF3 695 aa5.4□□□□□ -1.54
EDEM3-203ENST00000439962 GPKOWQ92917 476 aaPredicted RBP eCLIP5.4□□□□□ -1.54
EDEM3-203ENST00000439962 CHAMP1Q96JM3 812 aa5.4□□□□□ -1.54
EDEM3-203ENST00000439962 NCOA5Q9HCD5 579 aaKnown RBP5.4□□□□□ -1.54
EDEM3-203ENST00000439962 PRDM5Q9NQX1 630 aaPredicted RBP5.4□□□□□ -1.54
EDEM3-203ENST00000439962 HOOK1Q9UJC3 728 aaKnown RBP5.4□□□□□ -1.54
EDEM3-203ENST00000439962 PAXBP1Q9Y5B6 917 aa5.4□□□□□ -1.54
EDEM3-203ENST00000439962 ADGRA2Q96PE1 1338 aa5.4□□□□□ -1.55
EDEM3-203ENST00000439962 CPLX1O14810 134 aa5.4□□□□□ -1.55
EDEM3-203ENST00000439962 CCP110O43303 1012 aa5.4□□□□□ -1.55
EDEM3-203ENST00000439962 NR1I2O75469 434 aa5.4□□□□□ -1.55
EDEM3-203ENST00000439962 BMP15O95972 392 aa5.4□□□□□ -1.55
EDEM3-203ENST00000439962 MYCLP12524 364 aaPredicted RBP5.4□□□□□ -1.55
EDEM3-203ENST00000439962 FDPSP14324 419 aaKnown RBP5.4□□□□□ -1.55
EDEM3-203ENST00000439962 EIF2AK2P19525 551 aaKnown RBP5.4□□□□□ -1.55
EDEM3-203ENST00000439962 IBSPP21815 317 aaPredicted RBP5.4□□□□□ -1.55
EDEM3-203ENST00000439962 PTPREP23469 700 aa5.4□□□□□ -1.55
EDEM3-203ENST00000439962 ANTXR2P58335 489 aa5.4□□□□□ -1.55
EDEM3-203ENST00000439962 BEX3Q00994 111 aa5.4□□□□□ -1.55
EDEM3-203ENST00000439962 MAP2K5Q13163 448 aa5.4□□□□□ -1.55
EDEM3-203ENST00000439962 SLC39A14Q15043 492 aa5.4□□□□□ -1.55
EDEM3-203ENST00000439962 CDC37Q16543 378 aaPredicted RBP5.4□□□□□ -1.55
EDEM3-203ENST00000439962 MYSM1Q5VVJ2 828 aa5.4□□□□□ -1.55
EDEM3-203ENST00000439962 ZNF579Q8NAF0 562 aaKnown RBP5.4□□□□□ -1.55
EDEM3-203ENST00000439962 CHURC1Q8WUH1 139 aa5.4□□□□□ -1.55
EDEM3-203ENST00000439962 PIGSQ96S52 555 aa5.4□□□□□ -1.55
EDEM3-203ENST00000439962 PDGFCQ9NRA1 345 aa5.4□□□□□ -1.55
EDEM3-203ENST00000439962 MYH4Q9Y623 1939 aa5.4□□□□□ -1.55
EDEM3-203ENST00000439962 MCM3APO60318 1980 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 IGKV6D-41A0A0C4DH26 115 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 KLF18A0A0U1RQI7 1052 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 GOLGA8BA8MQT2 603 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 POTEB2H3BUK9 544 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 SPTLC2O15270 562 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 NRDCO43847 1150 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 ORC4O43929 436 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 CUTAO60888 179 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 HMGCRP04035 888 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 C6orf222P0C671 652 aaPredicted RBP5.39□□□□□ -1.55
EDEM3-203ENST00000439962 IFNAR1P17181 557 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 HSP90AA2PQ14568 343 aaPredicted RBP5.39□□□□□ -1.55
EDEM3-203ENST00000439962 SLC30A10Q6XR72 485 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 SYNE3Q6ZMZ3 975 aa5.39□□□□□ -1.55
EDEM3-203ENST00000439962 SEPT14Q6ZU15 432 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms