RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 LRRC2Q9BYS8 371 aa8.73□□□□□ -1.01
COPS3-203ENST00000439936 MCOLN1Q9GZU1 580 aa8.73□□□□□ -1.01
COPS3-203ENST00000439936 UBA5Q9GZZ9 404 aa8.73□□□□□ -1.01
COPS3-203ENST00000439936 SPATC1LQ9H0A9 340 aa8.73□□□□□ -1.01
COPS3-203ENST00000439936 LY9Q9HBG7 655 aa8.73□□□□□ -1.01
COPS3-203ENST00000439936 SRRDQ9UH36 339 aa8.73□□□□□ -1.01
COPS3-203ENST00000439936 GJD2Q9UKL4 321 aa8.73□□□□□ -1.01
COPS3-203ENST00000439936 PRR12Q9ULL5 1215 aa8.73□□□□□ -1.01
COPS3-203ENST00000439936 ISY1Q9ULR0 285 aaKnown RBP8.73□□□□□ -1.01
COPS3-203ENST00000439936 GABRQQ9UN88 632 aa8.73□□□□□ -1.01
COPS3-203ENST00000439936 PTPN22Q9Y2R2 807 aa8.73□□□□□ -1.01
COPS3-203ENST00000439936 BAZ2BQ9UIF8 2168 aaKnown RBP8.72□□□□□ -1.01
COPS3-203ENST00000439936 SH2B2O14492 632 aaPredicted RBP8.72□□□□□ -1.01
COPS3-203ENST00000439936 TNPO2O14787 897 aaKnown RBP8.72□□□□□ -1.01
COPS3-203ENST00000439936 HMGB1P09429 215 aaKnown RBP8.72□□□□□ -1.01
COPS3-203ENST00000439936 SNRPBP14678 240 aaKnown RBP8.72□□□□□ -1.01
COPS3-203ENST00000439936 MAPK4P31152 587 aa8.72□□□□□ -1.01
COPS3-203ENST00000439936 LIFRP42702 1097 aa8.72□□□□□ -1.01
COPS3-203ENST00000439936 STAT2P52630 851 aa8.72□□□□□ -1.01
COPS3-203ENST00000439936 SNAP25P60880 206 aa8.72□□□□□ -1.01
COPS3-203ENST00000439936 CCNA1P78396 465 aa8.72□□□□□ -1.01
COPS3-203ENST00000439936 IKQ13123 557 aaPredicted RBP8.72□□□□□ -1.01
COPS3-203ENST00000439936 MCM6Q14566 821 aa8.72□□□□□ -1.01
COPS3-203ENST00000439936 FBXO46Q6PJ61 603 aaPredicted RBP8.72□□□□□ -1.01
COPS3-203ENST00000439936 RIOX2Q8IUF8 465 aa8.72□□□□□ -1.01
COPS3-203ENST00000439936 CCAR1Q8IX12 1150 aaKnown RBP8.72□□□□□ -1.01
COPS3-203ENST00000439936 TNS4Q8IZW8 715 aa8.72□□□□□ -1.01
COPS3-203ENST00000439936 CPXCR1Q8N123 301 aa8.72□□□□□ -1.01
COPS3-203ENST00000439936 STAG2Q8N3U4 1231 aa8.72□□□□□ -1.01
COPS3-203ENST00000439936 COA7Q96BR5 231 aa8.72□□□□□ -1.01
COPS3-203ENST00000439936 TCEANC2Q96MN5 208 aa8.72□□□□□ -1.01
COPS3-203ENST00000439936 JAKMIP1Q96N16 626 aaKnown RBP8.72□□□□□ -1.01
COPS3-203ENST00000439936 CPVLQ9H3G5 476 aa8.72□□□□□ -1.01
COPS3-203ENST00000439936 SLC38A10Q9HBR0 1119 aa8.72□□□□□ -1.01
COPS3-203ENST00000439936 RAVER2Q9HCJ3 691 aaKnown RBP8.72□□□□□ -1.01
COPS3-203ENST00000439936 ZNF214Q9UL59 606 aaPredicted RBP8.72□□□□□ -1.01
COPS3-203ENST00000439936 RIPK3Q9Y572 518 aa8.72□□□□□ -1.01
COPS3-203ENST00000439936 WDR19Q8NEZ3 1342 aa8.71□□□□□ -1.02
COPS3-203ENST00000439936 PALM3A6NDB9 673 aaPredicted RBP8.71□□□□□ -1.02
COPS3-203ENST00000439936 ATP2A1O14983 1001 aa8.71□□□□□ -1.02
COPS3-203ENST00000439936 SLC25A27O95847 323 aa8.71□□□□□ -1.02
COPS3-203ENST00000439936 ERCC3P19447 782 aa8.71□□□□□ -1.02
COPS3-203ENST00000439936 PSMA5P28066 241 aa8.71□□□□□ -1.02
COPS3-203ENST00000439936 FLT3LGP49771 235 aa8.71□□□□□ -1.02
COPS3-203ENST00000439936 PRMT2P55345 433 aa8.71□□□□□ -1.02
COPS3-203ENST00000439936 WNT7BP56706 349 aa8.71□□□□□ -1.02
COPS3-203ENST00000439936 TROAPQ12815 778 aa8.71□□□□□ -1.02
COPS3-203ENST00000439936 GPATCH4Q5T3I0 446 aaKnown RBP8.71□□□□□ -1.02
COPS3-203ENST00000439936 SYDE2Q5VT97 1194 aa8.71□□□□□ -1.02
COPS3-203ENST00000439936 WDR78Q5VTH9 848 aa8.71□□□□□ -1.02
COPS3-203ENST00000439936 BLOC1S2Q6QNY1 142 aa8.71□□□□□ -1.02
COPS3-203ENST00000439936 GPR142Q7Z601 462 aa8.71□□□□□ -1.02
COPS3-203ENST00000439936 PLEKHH3Q7Z736 793 aa8.71□□□□□ -1.02
COPS3-203ENST00000439936 NPAS3Q8IXF0 933 aa8.71□□□□□ -1.02
COPS3-203ENST00000439936 SHCBP1Q8NEM2 672 aa8.71□□□□□ -1.02
COPS3-203ENST00000439936 HPS1Q92902 700 aa8.71□□□□□ -1.02
COPS3-203ENST00000439936 AGBL1Q96MI9 1066 aa8.71□□□□□ -1.02
COPS3-203ENST00000439936 VAT1LQ9HCJ6 419 aa8.71□□□□□ -1.02
COPS3-203ENST00000439936 HMX1Q9NP08 348 aaPredicted RBP8.71□□□□□ -1.02
COPS3-203ENST00000439936 MAD2L2Q9UI95 211 aa8.71□□□□□ -1.02
COPS3-203ENST00000439936 CTDP1Q9Y5B0 961 aaPredicted RBP8.71□□□□□ -1.02
COPS3-203ENST00000439936 PTCH2Q9Y6C5 1203 aa8.71□□□□□ -1.02
COPS3-203ENST00000439936 PLXNB2O15031 1838 aa8.71□□□□□ -1.02
COPS3-203ENST00000439936 MYH6P13533 1939 aa8.7□□□□□ -1.02
COPS3-203ENST00000439936 ZNF536O15090 1300 aa8.7□□□□□ -1.02
COPS3-203ENST00000439936 CCDC69A6NI79 296 aa8.7□□□□□ -1.02
COPS3-203ENST00000439936 KLRF2D3W0D1 207 aa8.7□□□□□ -1.02
COPS3-203ENST00000439936 SIAH2O43255 324 aa8.7□□□□□ -1.02
COPS3-203ENST00000439936 STRNO43815 780 aa8.7□□□□□ -1.02
COPS3-203ENST00000439936 PARP1P09874 1014 aaKnown RBP8.7□□□□□ -1.02
COPS3-203ENST00000439936 CASTP20810 708 aaKnown RBP8.7□□□□□ -1.02
COPS3-203ENST00000439936 PRKCZQ05513 592 aa8.7□□□□□ -1.02
COPS3-203ENST00000439936 ASPRV1Q53RT3 343 aa8.7□□□□□ -1.02
COPS3-203ENST00000439936 NFXL1Q6ZNB6 911 aa8.7□□□□□ -1.02
COPS3-203ENST00000439936 Q6ZUG5 572 aa8.7□□□□□ -1.02
COPS3-203ENST00000439936 RUFY3Q7L099 469 aa8.7□□□□□ -1.02
COPS3-203ENST00000439936 CATIPQ7Z7H3 387 aa8.7□□□□□ -1.02
COPS3-203ENST00000439936 SGMS1Q86VZ5 419 aa8.7□□□□□ -1.02
COPS3-203ENST00000439936 NCAPG2Q86XI2 1143 aa8.7□□□□□ -1.02
COPS3-203ENST00000439936 ADGRF4Q8IZF3 695 aa8.7□□□□□ -1.02
COPS3-203ENST00000439936 ZNF654Q8IZM8 581 aa8.7□□□□□ -1.02
COPS3-203ENST00000439936 USP6NLQ92738 828 aa8.7□□□□□ -1.02
COPS3-203ENST00000439936 MYL10Q9BUA6 226 aa8.7□□□□□ -1.02
COPS3-203ENST00000439936 TM6SF1Q9BZW5 370 aa8.7□□□□□ -1.02
COPS3-203ENST00000439936 MROH8Q9H579 483 aa8.7□□□□□ -1.02
COPS3-203ENST00000439936 A0A0G2JMZ2 1700 aa8.69□□□□□ -1.02
COPS3-203ENST00000439936 SLC15A5A6NIM6 579 aa8.69□□□□□ -1.02
COPS3-203ENST00000439936 CCNYL3P0C7X3 344 aa8.69□□□□□ -1.02
COPS3-203ENST00000439936 CYP2B6P20813 491 aa8.69□□□□□ -1.02
COPS3-203ENST00000439936 RPS6KB1P23443 525 aa8.69□□□□□ -1.02
COPS3-203ENST00000439936 OAZ1P54368 228 aa8.69□□□□□ -1.02
COPS3-203ENST00000439936 GRM4Q14833 912 aa8.69□□□□□ -1.02
COPS3-203ENST00000439936 PTPRNQ16849 979 aa8.69□□□□□ -1.02
COPS3-203ENST00000439936 SLC35G1Q2M3R5 365 aa8.69□□□□□ -1.02
COPS3-203ENST00000439936 SNRNP48Q6IEG0 339 aaKnown RBP8.69□□□□□ -1.02
COPS3-203ENST00000439936 CCDC174Q6PII3 467 aa8.69□□□□□ -1.02
COPS3-203ENST00000439936 NBPF11Q86T75 865 aa8.69□□□□□ -1.02
COPS3-203ENST00000439936 RAET1EQ8TD07 263 aa8.69□□□□□ -1.02
COPS3-203ENST00000439936 NUP133Q8WUM0 1156 aa8.69□□□□□ -1.02
COPS3-203ENST00000439936 MAP3K14Q99558 947 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms