RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 TXNP10599 105 aaKnown RBP23.63■■□□□ 1.37
NCKIPSD-206ENST00000439518 WTAPQ15007 396 aa23.63■■□□□ 1.37
NCKIPSD-206ENST00000439518 CCDC62Q6P9F0 684 aa23.63■■□□□ 1.37
NCKIPSD-206ENST00000439518 CHST3Q7LGC8 479 aa23.63■■□□□ 1.37
NCKIPSD-206ENST00000439518 MB21D2Q8IYB1 491 aaPredicted RBP23.63■■□□□ 1.37
NCKIPSD-206ENST00000439518 IGDCC4Q8TDY8 1250 aa23.63■■□□□ 1.37
NCKIPSD-206ENST00000439518 COPS5Q92905 334 aa23.63■■□□□ 1.37
NCKIPSD-206ENST00000439518 IWS1Q96ST2 819 aa23.63■■□□□ 1.37
NCKIPSD-206ENST00000439518 RMDN3Q96TC7 470 aa23.63■■□□□ 1.37
NCKIPSD-206ENST00000439518 PPP1R12CQ9BZL4 782 aa23.63■■□□□ 1.37
NCKIPSD-206ENST00000439518 RIOX1Q9H6W3 641 aa23.63■■□□□ 1.37
NCKIPSD-206ENST00000439518 ERICH2A1L162 156 aa23.62■■□□□ 1.37
NCKIPSD-206ENST00000439518 B4GALT4O60513 344 aa23.62■■□□□ 1.37
NCKIPSD-206ENST00000439518 ARIH2O95376 493 aa23.62■■□□□ 1.37
NCKIPSD-206ENST00000439518 CSF2RAP15509 400 aa23.62■■□□□ 1.37
NCKIPSD-206ENST00000439518 CYP2C18P33260 490 aa23.62■■□□□ 1.37
NCKIPSD-206ENST00000439518 HSD17B4P51659 736 aa23.62■■□□□ 1.37
NCKIPSD-206ENST00000439518 PPIGQ13427 754 aaKnown RBP eCLIP23.62■■□□□ 1.374e-10■■■■■ 27.2
NCKIPSD-206ENST00000439518 TTLL4Q14679 1199 aa23.62■■□□□ 1.37
NCKIPSD-206ENST00000439518 SART3Q15020 963 aaKnown RBP23.62■■□□□ 1.37
NCKIPSD-206ENST00000439518 TMEM199Q8N511 208 aa23.62■■□□□ 1.37
NCKIPSD-206ENST00000439518 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.62■■□□□ 1.379e-8■■■■■ 41.1
NCKIPSD-206ENST00000439518 CFBP00751 764 aa23.61■■□□□ 1.37
NCKIPSD-206ENST00000439518 TMEM67Q5HYA8 995 aa23.61■■□□□ 1.37
NCKIPSD-206ENST00000439518 TMEM240Q5SV17 173 aa23.61■■□□□ 1.37
NCKIPSD-206ENST00000439518 GUCD1Q96NT3 240 aa23.61■■□□□ 1.37
NCKIPSD-206ENST00000439518 MTG1Q9BT17 334 aaPredicted RBP23.61■■□□□ 1.37
NCKIPSD-206ENST00000439518 LSG1Q9H089 658 aaKnown RBP23.61■■□□□ 1.37
NCKIPSD-206ENST00000439518 ALDH8A1Q9H2A2 487 aaPredicted RBP23.61■■□□□ 1.37
NCKIPSD-206ENST00000439518 HIPK3Q9H422 1215 aa23.61■■□□□ 1.37
NCKIPSD-206ENST00000439518 PCDHA1Q9Y5I3 950 aa23.61■■□□□ 1.37
NCKIPSD-206ENST00000439518 CYTH3O43739 400 aa23.6■■□□□ 1.37
NCKIPSD-206ENST00000439518 KPNA6O60684 536 aa23.6■■□□□ 1.37
NCKIPSD-206ENST00000439518 MYL3P08590 195 aa23.6■■□□□ 1.37
NCKIPSD-206ENST00000439518 STXBP2Q15833 593 aa23.6■■□□□ 1.37
NCKIPSD-206ENST00000439518 BRDTQ58F21 947 aaPredicted RBP23.6■■□□□ 1.37
NCKIPSD-206ENST00000439518 ZNF697Q5TEC3 545 aa23.6■■□□□ 1.37
NCKIPSD-206ENST00000439518 ESYT1Q9BSJ8 1104 aa23.6■■□□□ 1.37
NCKIPSD-206ENST00000439518 NOC4LQ9BVI4 516 aaKnown RBP23.6■■□□□ 1.37
NCKIPSD-206ENST00000439518 MAP3K20Q9NYL2 800 aaKnown RBP23.6■■□□□ 1.37
NCKIPSD-206ENST00000439518 UMODL1Q5DID0 1318 aa23.59■■□□□ 1.37
NCKIPSD-206ENST00000439518 EIF2AK2P19525 551 aaKnown RBP23.59■■□□□ 1.37
NCKIPSD-206ENST00000439518 RASIP1Q5U651 963 aa23.59■■□□□ 1.37
NCKIPSD-206ENST00000439518 ARHGEF16Q5VV41 709 aa23.59■■□□□ 1.37
NCKIPSD-206ENST00000439518 CATIPQ7Z7H3 387 aa23.59■■□□□ 1.37
NCKIPSD-206ENST00000439518 FAM161BQ96MY7 647 aa23.59■■□□□ 1.37
NCKIPSD-206ENST00000439518 PIGSQ96S52 555 aa23.59■■□□□ 1.37
NCKIPSD-206ENST00000439518 GPHNQ9NQX3 736 aaPredicted RBP23.59■■□□□ 1.37
NCKIPSD-206ENST00000439518 PXMP2Q9NR77 195 aa23.59■■□□□ 1.37
NCKIPSD-206ENST00000439518 BAZ2BQ9UIF8 2168 aaKnown RBP23.59■■□□□ 1.37
NCKIPSD-206ENST00000439518 SCN10AQ9Y5Y9 1956 aa23.58■■□□□ 1.37
NCKIPSD-206ENST00000439518 A0A0C4DFX4 3053 aa23.58■■□□□ 1.37
NCKIPSD-206ENST00000439518 EIF3JO75822 258 aaKnown RBP23.58■■□□□ 1.37
NCKIPSD-206ENST00000439518 NR3C2P08235 984 aa23.58■■□□□ 1.37
NCKIPSD-206ENST00000439518 TRAF1Q13077 416 aa23.58■■□□□ 1.37
NCKIPSD-206ENST00000439518 SEPT14Q6ZU15 432 aa23.58■■□□□ 1.37
NCKIPSD-206ENST00000439518 CENPQQ7L2Z9 268 aaPredicted RBP23.58■■□□□ 1.37
NCKIPSD-206ENST00000439518 HOMER1Q86YM7 354 aa23.58■■□□□ 1.37
NCKIPSD-206ENST00000439518 SAMD3Q8N6K7 520 aa23.58■■□□□ 1.37
NCKIPSD-206ENST00000439518 MTA3Q9BTC8 594 aa23.58■■□□□ 1.37
NCKIPSD-206ENST00000439518 SEMA6BQ9H3T3 888 aa23.58■■□□□ 1.37
NCKIPSD-206ENST00000439518 LY9Q9HBG7 655 aa23.58■■□□□ 1.37
NCKIPSD-206ENST00000439518 PNMA6FA0A0J9YX94 578 aa23.57■■□□□ 1.36
NCKIPSD-206ENST00000439518 ACRP10323 421 aa23.57■■□□□ 1.36
NCKIPSD-206ENST00000439518 ARHGAP1Q07960 439 aa23.57■■□□□ 1.36
NCKIPSD-206ENST00000439518 LY6KQ17RY6 165 aa23.57■■□□□ 1.36
NCKIPSD-206ENST00000439518 NBPF20Q3BBV1 942 aa23.57■■□□□ 1.36
NCKIPSD-206ENST00000439518 ZNF365Q70YC5 407 aa23.57■■□□□ 1.36
NCKIPSD-206ENST00000439518 MAP3K14Q99558 947 aa23.57■■□□□ 1.36
NCKIPSD-206ENST00000439518 TTYH1Q9H313 450 aaPredicted RBP23.57■■□□□ 1.36
NCKIPSD-206ENST00000439518 IL23AQ9NPF7 189 aa23.57■■□□□ 1.36
NCKIPSD-206ENST00000439518 TRMT13Q9NUP7 481 aaKnown RBP23.57■■□□□ 1.36
NCKIPSD-206ENST00000439518 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.56■■□□□ 1.36
NCKIPSD-206ENST00000439518 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.56■■□□□ 1.36
NCKIPSD-206ENST00000439518 SLC27A2O14975 620 aa23.56■■□□□ 1.36
NCKIPSD-206ENST00000439518 GH1P01241 217 aa23.56■■□□□ 1.36
NCKIPSD-206ENST00000439518 SUPT20HL2P0C7V6 817 aa23.56■■□□□ 1.36
NCKIPSD-206ENST00000439518 COL9A3Q14050 684 aaPredicted RBP23.56■■□□□ 1.36
NCKIPSD-206ENST00000439518 BMP2KLQ5H9B9 411 aa23.56■■□□□ 1.36
NCKIPSD-206ENST00000439518 PSRC1Q6PGN9 363 aaPredicted RBP23.56■■□□□ 1.36
NCKIPSD-206ENST00000439518 SKAP1Q86WV1 359 aa23.56■■□□□ 1.36
NCKIPSD-206ENST00000439518 SLC17A8Q8NDX2 589 aa23.56■■□□□ 1.36
NCKIPSD-206ENST00000439518 AFG1LQ8WV93 481 aa23.56■■□□□ 1.36
NCKIPSD-206ENST00000439518 PDCD2LQ9BRP1 358 aa23.56■■□□□ 1.36
NCKIPSD-206ENST00000439518 WNT8AQ9H1J5 351 aa23.56■■□□□ 1.36
NCKIPSD-206ENST00000439518 TMEM265A0A087WTH1 108 aa23.55■■□□□ 1.36
NCKIPSD-206ENST00000439518 PRC1O43663 620 aa23.55■■□□□ 1.36
NCKIPSD-206ENST00000439518 HOXA13P31271 388 aaPredicted RBP23.55■■□□□ 1.36
NCKIPSD-206ENST00000439518 CCL23P55773 120 aa23.55■■□□□ 1.36
NCKIPSD-206ENST00000439518 NECTIN1Q15223 517 aa23.55■■□□□ 1.36
NCKIPSD-206ENST00000439518 NFRKBQ6P4R8 1299 aa23.55■■□□□ 1.36
NCKIPSD-206ENST00000439518 DDX41Q9UJV9 622 aaKnown RBP23.55■■□□□ 1.36
NCKIPSD-206ENST00000439518 KIAA1217Q5T5P2 1943 aa23.55■■□□□ 1.36
NCKIPSD-206ENST00000439518 RGS20O76081 388 aa23.54■■□□□ 1.36
NCKIPSD-206ENST00000439518 MMP3P08254 477 aa23.54■■□□□ 1.36
NCKIPSD-206ENST00000439518 MCM5P33992 734 aa23.54■■□□□ 1.36
NCKIPSD-206ENST00000439518 VSIG10LQ86VR7 867 aa23.54■■□□□ 1.36
NCKIPSD-206ENST00000439518 ZNF654Q8IZM8 581 aa23.54■■□□□ 1.36
NCKIPSD-206ENST00000439518 CDX2Q99626 313 aaPredicted RBP23.54■■□□□ 1.36
NCKIPSD-206ENST00000439518 GCOM1H8Y6P7 765 aaPredicted RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms