RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 FBXL6Q8N531 539 aa11.65□□□□□ -0.54
SMPD4-208ENST00000439029 AFAP1L1Q8TED9 768 aa11.65□□□□□ -0.54
SMPD4-208ENST00000439029 FRAT1Q92837 279 aaPredicted RBP11.65□□□□□ -0.54
SMPD4-208ENST00000439029 NSUN3Q9H649 340 aaKnown RBP11.65□□□□□ -0.54
SMPD4-208ENST00000439029 IGFLR1Q9H665 355 aa11.65□□□□□ -0.54
SMPD4-208ENST00000439029 IL1RAPL2Q9NP60 686 aa11.65□□□□□ -0.54
SMPD4-208ENST00000439029 CYP39A1Q9NYL5 469 aa11.65□□□□□ -0.54
SMPD4-208ENST00000439029 INSL6Q9Y581 213 aa11.65□□□□□ -0.54
SMPD4-208ENST00000439029 KMT2EQ8IZD2 1858 aa11.64□□□□□ -0.55
SMPD4-208ENST00000439029 BMP3P12645 472 aa11.64□□□□□ -0.55
SMPD4-208ENST00000439029 GTF2F1P35269 517 aaKnown RBP eCLIP11.64□□□□□ -0.557e-8■■□□□ 11.7
SMPD4-208ENST00000439029 MKRN4PQ13434 485 aaPredicted RBP11.64□□□□□ -0.55
SMPD4-208ENST00000439029 CCDC155Q8N6L0 562 aa11.64□□□□□ -0.55
SMPD4-208ENST00000439029 CAGE1Q8TC20 777 aa11.64□□□□□ -0.55
SMPD4-208ENST00000439029 DDRGK1Q96HY6 314 aa11.64□□□□□ -0.55
SMPD4-208ENST00000439029 POP1Q99575 1024 aaKnown RBP11.64□□□□□ -0.55
SMPD4-208ENST00000439029 PRRX2Q99811 253 aa11.64□□□□□ -0.55
SMPD4-208ENST00000439029 MKNK2Q9HBH9 465 aa11.64□□□□□ -0.55
SMPD4-208ENST00000439029 EXOC6BQ9Y2D4 811 aa11.64□□□□□ -0.55
SMPD4-208ENST00000439029 NOP58Q9Y2X3 529 aaKnown RBP11.64□□□□□ -0.55
SMPD4-208ENST00000439029 COL4A6Q14031 1691 aa11.64□□□□□ -0.55
SMPD4-208ENST00000439029 LCTP09848 1927 aa11.64□□□□□ -0.55
SMPD4-208ENST00000439029 PLXNA3P51805 1871 aa11.63□□□□□ -0.55
SMPD4-208ENST00000439029 C5orf42Q9H799 3197 aa11.63□□□□□ -0.55
SMPD4-208ENST00000439029 GREB1LQ9C091 1923 aaPredicted RBP11.63□□□□□ -0.55
SMPD4-208ENST00000439029 MYH4Q9Y623 1939 aa11.63□□□□□ -0.55
SMPD4-208ENST00000439029 MINDY4BA8MYZ0 360 aa11.63□□□□□ -0.55
SMPD4-208ENST00000439029 H3BNC9 293 aa11.63□□□□□ -0.55
SMPD4-208ENST00000439029 LINC01565O15544 149 aa11.63□□□□□ -0.55
SMPD4-208ENST00000439029 ANP32CO43423 234 aa11.63□□□□□ -0.55
SMPD4-208ENST00000439029 PRDM1O75626 825 aa11.63□□□□□ -0.55
SMPD4-208ENST00000439029 KRT37O76014 449 aa11.63□□□□□ -0.55
SMPD4-208ENST00000439029 UPP2O95045 317 aa11.63□□□□□ -0.55
SMPD4-208ENST00000439029 CXCL10P02778 98 aa11.63□□□□□ -0.55
SMPD4-208ENST00000439029 CKBP12277 381 aa11.63□□□□□ -0.55
SMPD4-208ENST00000439029 ADD2P35612 726 aa11.63□□□□□ -0.55
SMPD4-208ENST00000439029 ZXDAP98168 799 aa11.63□□□□□ -0.55
SMPD4-208ENST00000439029 PTPN11Q06124 597 aaPredicted RBP11.63□□□□□ -0.55
SMPD4-208ENST00000439029 BAATQ14032 418 aaPredicted RBP11.63□□□□□ -0.55
SMPD4-208ENST00000439029 COL19A1Q14993 1142 aa11.63□□□□□ -0.55
SMPD4-208ENST00000439029 BRDTQ58F21 947 aaPredicted RBP11.63□□□□□ -0.55
SMPD4-208ENST00000439029 TMEM192Q8IY95 271 aa11.63□□□□□ -0.55
SMPD4-208ENST00000439029 TMEM57Q8N5G2 664 aa11.63□□□□□ -0.55
SMPD4-208ENST00000439029 ARHGAP45Q92619 1136 aa11.63□□□□□ -0.55
SMPD4-208ENST00000439029 CEP95Q96GE4 821 aa11.63□□□□□ -0.55
SMPD4-208ENST00000439029 TBX10O75333 385 aa11.62□□□□□ -0.55
SMPD4-208ENST00000439029 AMHP03971 560 aa11.62□□□□□ -0.55
SMPD4-208ENST00000439029 AVPR2P30518 371 aa11.62□□□□□ -0.55
SMPD4-208ENST00000439029 ID4P47928 161 aa11.62□□□□□ -0.55
SMPD4-208ENST00000439029 ALDH5A1P51649 535 aaPredicted RBP11.62□□□□□ -0.55
SMPD4-208ENST00000439029 HYAL1Q12794 435 aa11.62□□□□□ -0.55
SMPD4-208ENST00000439029 MBTPS1Q14703 1052 aa11.62□□□□□ -0.55
SMPD4-208ENST00000439029 PPP2R5BQ15173 497 aa11.62□□□□□ -0.55
SMPD4-208ENST00000439029 RASGRP2Q7LDG7 609 aa11.62□□□□□ -0.55
SMPD4-208ENST00000439029 MORC4Q8TE76 937 aa11.62□□□□□ -0.55
SMPD4-208ENST00000439029 WNT8BQ93098 351 aa11.62□□□□□ -0.55
SMPD4-208ENST00000439029 YME1L1Q96TA2 773 aa11.62□□□□□ -0.55
SMPD4-208ENST00000439029 FSD1Q9BTV5 496 aa11.62□□□□□ -0.55
SMPD4-208ENST00000439029 TRPC6Q9Y210 931 aa11.62□□□□□ -0.55
SMPD4-208ENST00000439029 MTMR7Q9Y216 660 aa11.62□□□□□ -0.55
SMPD4-208ENST00000439029 MICAL3Q7RTP6 2002 aa11.61□□□□□ -0.55
SMPD4-208ENST00000439029 IGKV6D-41A0A0C4DH26 115 aa11.61□□□□□ -0.55
SMPD4-208ENST00000439029 RBM47A0AV96 593 aaKnown RBP11.61□□□□□ -0.55
SMPD4-208ENST00000439029 A6NJR5 290 aa11.61□□□□□ -0.55
SMPD4-208ENST00000439029 KDM4AO75164 1064 aa11.61□□□□□ -0.55
SMPD4-208ENST00000439029 PDGFBP01127 241 aaPredicted RBP11.61□□□□□ -0.55
SMPD4-208ENST00000439029 MCCP23508 829 aa11.61□□□□□ -0.55
SMPD4-208ENST00000439029 STAT2P52630 851 aa11.61□□□□□ -0.55
SMPD4-208ENST00000439029 HTRA4P83105 476 aaPredicted RBP11.61□□□□□ -0.55
SMPD4-208ENST00000439029 ZNF200P98182 395 aaPredicted RBP11.61□□□□□ -0.55
SMPD4-208ENST00000439029 SMAD4Q13485 552 aaKnown RBP11.61□□□□□ -0.55
SMPD4-208ENST00000439029 PKN1Q16512 942 aa11.61□□□□□ -0.55
SMPD4-208ENST00000439029 TKFCQ3LXA3 575 aa11.61□□□□□ -0.55
SMPD4-208ENST00000439029 ZNF618Q5T7W0 954 aa11.61□□□□□ -0.55
SMPD4-208ENST00000439029 KCTD1Q719H9 257 aa11.61□□□□□ -0.55
SMPD4-208ENST00000439029 ERMP1Q7Z2K6 904 aa11.61□□□□□ -0.55
SMPD4-208ENST00000439029 FBXO11Q86XK2 927 aa11.61□□□□□ -0.55
SMPD4-208ENST00000439029 SP7Q8TDD2 431 aaPredicted RBP11.61□□□□□ -0.55
SMPD4-208ENST00000439029 ALG1Q9BT22 464 aa11.61□□□□□ -0.55
SMPD4-208ENST00000439029 CD207Q9UJ71 328 aa11.61□□□□□ -0.55
SMPD4-208ENST00000439029 CCPG1Q9ULG6 757 aa11.61□□□□□ -0.55
SMPD4-208ENST00000439029 ZBED9Q6R2W3 1325 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 RAD50Q92878 1312 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 PTPDC1A2A3K4 754 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 PRR23AA6NEV1 266 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 GRM6O15303 877 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 KPNA6O60684 536 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 EFCAB14O75071 495 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 LGR5O75473 907 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 ARIH2O95376 493 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 TXNP10599 105 aaKnown RBP11.6□□□□□ -0.55
SMPD4-208ENST00000439029 CALML3P27482 149 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 PDE4BQ07343 736 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 CTC1Q2NKJ3 1217 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 TRAF7Q6Q0C0 670 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 SLC30A10Q6XR72 485 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 CHST3Q7LGC8 479 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 TRMT2AQ8IZ69 625 aaKnown RBP11.6□□□□□ -0.55
SMPD4-208ENST00000439029 GMCL1P1Q8NEA9 526 aa11.6□□□□□ -0.55
SMPD4-208ENST00000439029 DBF4BQ8NFT6 615 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms