RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 KDM7AQ6ZMT4 941 aa14.81□□□□□ -0.04
ACTN1-204ENST00000438964 UBLCP1Q8WVY7 318 aaPredicted RBP14.81□□□□□ -0.04
ACTN1-204ENST00000438964 ATP6V1G3Q96LB4 118 aa14.81□□□□□ -0.04
ACTN1-204ENST00000438964 NLRP3Q96P20 1036 aa14.81□□□□□ -0.04
ACTN1-204ENST00000438964 CNOT8Q9UFF9 292 aaKnown RBP14.81□□□□□ -0.04
ACTN1-204ENST00000438964 A0A1W2PQC6 194 aa14.8□□□□□ -0.04
ACTN1-204ENST00000438964 PLCG1P19174 1290 aa14.8□□□□□ -0.04
ACTN1-204ENST00000438964 CTSWP56202 376 aa14.8□□□□□ -0.04
ACTN1-204ENST00000438964 IFT20Q8IY31 132 aa14.8□□□□□ -0.04
ACTN1-204ENST00000438964 ZBTB38Q8NAP3 1195 aaPredicted RBP14.8□□□□□ -0.04
ACTN1-204ENST00000438964 PEX19P40855 299 aa14.8□□□□□ -0.04
ACTN1-204ENST00000438964 ITGB3BPQ13352 177 aaPredicted RBP14.8□□□□□ -0.04
ACTN1-204ENST00000438964 CACNA2D4Q7Z3S7 1137 aa14.8□□□□□ -0.04
ACTN1-204ENST00000438964 ADAT2Q7Z6V5 191 aaKnown RBP14.8□□□□□ -0.04
ACTN1-204ENST00000438964 PARP9Q8IXQ6 854 aa14.8□□□□□ -0.04
ACTN1-204ENST00000438964 UHMK1Q8TAS1 419 aaKnown RBP14.8□□□□□ -0.04
ACTN1-204ENST00000438964 MIEF2Q96C03 454 aa14.8□□□□□ -0.04
ACTN1-204ENST00000438964 THOC1Q96FV9 657 aaKnown RBP14.8□□□□□ -0.04
ACTN1-204ENST00000438964 ASAP1Q9ULH1 1129 aa14.8□□□□□ -0.04
ACTN1-204ENST00000438964 RASSF9O75901 435 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 CYP2D6P10635 497 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 TROAPQ12815 778 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 SNCBQ16143 134 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 KIF6Q6ZMV9 814 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 MICALCLQ6ZW33 695 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 CCDC170Q8IYT3 715 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 FUKQ8N0W3 1084 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 P2RX5Q93086 422 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 NEUROG2Q9H2A3 272 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 NOVA2Q9UNW9 492 aaKnown RBP14.79□□□□□ -0.04
ACTN1-204ENST00000438964 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.79□□□□□ -0.04
ACTN1-204ENST00000438964 L3MBTL1Q9Y468 752 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 PKD1L3Q7Z443 1732 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 PRPF3O43395 683 aaKnown RBP14.79□□□□□ -0.04
ACTN1-204ENST00000438964 CSF1RP07333 972 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 TCP1P17987 556 aaKnown RBP14.79□□□□□ -0.04
ACTN1-204ENST00000438964 DTHD1Q6ZMT9 781 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 FAM107AO95990 144 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 MYBL1P10243 752 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 EPB41P11171 864 aaKnown RBP14.79□□□□□ -0.04
ACTN1-204ENST00000438964 KLRC1P26715 233 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 CTNNA1P35221 906 aaKnown RBP14.79□□□□□ -0.04
ACTN1-204ENST00000438964 CFAP221Q4G0U5 840 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 PNMA8AQ86V59 439 aaPredicted RBP14.79□□□□□ -0.04
ACTN1-204ENST00000438964 STAG2Q8N3U4 1231 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 TCP11Q8WWU5 503 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 THAP9Q9H5L6 903 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 TBC1D7Q9P0N9 293 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 LEMD3Q9Y2U8 911 aa14.79□□□□□ -0.04
ACTN1-204ENST00000438964 TJP1Q07157 1748 aa14.78□□□□□ -0.04
ACTN1-204ENST00000438964 SMTNP53814 917 aa14.78□□□□□ -0.04
ACTN1-204ENST00000438964 SEMA6BQ9H3T3 888 aa14.78□□□□□ -0.04
ACTN1-204ENST00000438964 DNAJC5Q9H3Z4 198 aa14.78□□□□□ -0.04
ACTN1-204ENST00000438964 CNTNAP5Q8WYK1 1306 aa14.78□□□□□ -0.04
ACTN1-204ENST00000438964 BCL9LQ86UU0 1499 aa14.78□□□□□ -0.04
ACTN1-204ENST00000438964 GOLGA6L10A6NI86 522 aa14.78□□□□□ -0.04
ACTN1-204ENST00000438964 GOLGA8HP0CJ92 632 aa14.78□□□□□ -0.04
ACTN1-204ENST00000438964 SCG2P13521 617 aa14.78□□□□□ -0.04
ACTN1-204ENST00000438964 GBP2P32456 591 aaPredicted RBP14.78□□□□□ -0.04
ACTN1-204ENST00000438964 HSD17B3P37058 310 aa14.78□□□□□ -0.04
ACTN1-204ENST00000438964 ERVK-9P63128 1117 aa14.78□□□□□ -0.04
ACTN1-204ENST00000438964 PAK2Q13177 524 aa14.78□□□□□ -0.04
ACTN1-204ENST00000438964 ALX1Q15699 326 aa14.78□□□□□ -0.04
ACTN1-204ENST00000438964 PREPLQ4J6C6 727 aaPredicted RBP14.78□□□□□ -0.04
ACTN1-204ENST00000438964 HIBCHQ6NVY1 386 aaPredicted RBP14.78□□□□□ -0.04
ACTN1-204ENST00000438964 TMTC3Q6ZXV5 915 aa14.78□□□□□ -0.04
ACTN1-204ENST00000438964 GIMAP8Q8ND71 665 aaPredicted RBP14.78□□□□□ -0.04
ACTN1-204ENST00000438964 CAVIN3Q969G5 261 aa14.78□□□□□ -0.04
ACTN1-204ENST00000438964 DDX47Q9H0S4 455 aaKnown RBP14.78□□□□□ -0.04
ACTN1-204ENST00000438964 DPH5Q9H2P9 285 aa14.78□□□□□ -0.04
ACTN1-204ENST00000438964 KCNG1Q9UIX4 513 aa14.78□□□□□ -0.04
ACTN1-204ENST00000438964 USP17L12C9JPN9 530 aa14.77□□□□□ -0.04
ACTN1-204ENST00000438964 USP17L21D6R901 530 aa14.77□□□□□ -0.04
ACTN1-204ENST00000438964 KCNK3O14649 394 aa14.77□□□□□ -0.04
ACTN1-204ENST00000438964 CLTAP09496 248 aa14.77□□□□□ -0.04
ACTN1-204ENST00000438964 COPB2P35606 906 aa14.77□□□□□ -0.04
ACTN1-204ENST00000438964 GYG1P46976 350 aa14.77□□□□□ -0.04
ACTN1-204ENST00000438964 PUM3Q15397 648 aaKnown RBP14.77□□□□□ -0.04
ACTN1-204ENST00000438964 TXNRD1Q16881 649 aa14.77□□□□□ -0.04
ACTN1-204ENST00000438964 MAEAQ7L5Y9 396 aa14.77□□□□□ -0.04
ACTN1-204ENST00000438964 NOX5Q96PH1 765 aa14.77□□□□□ -0.04
ACTN1-204ENST00000438964 SCN11AQ9UI33 1791 aa14.77□□□□□ -0.04
ACTN1-204ENST00000438964 ARID4AP29374 1257 aaPredicted RBP14.77□□□□□ -0.05
ACTN1-204ENST00000438964 TECP42680 631 aa14.77□□□□□ -0.05
ACTN1-204ENST00000438964 PPP1R7Q15435 360 aa14.77□□□□□ -0.05
ACTN1-204ENST00000438964 HEATR3Q7Z4Q2 680 aa14.77□□□□□ -0.05
ACTN1-204ENST00000438964 CPLX4Q7Z7G2 160 aa14.77□□□□□ -0.05
ACTN1-204ENST00000438964 NLRP10Q86W26 655 aa14.77□□□□□ -0.05
ACTN1-204ENST00000438964 TMTC2Q8N394 836 aa14.77□□□□□ -0.05
ACTN1-204ENST00000438964 MARCH10Q8NA82 808 aaPredicted RBP14.77□□□□□ -0.05
ACTN1-204ENST00000438964 GJA10Q969M2 543 aa14.77□□□□□ -0.05
ACTN1-204ENST00000438964 SEC16BQ96JE7 1060 aa14.77□□□□□ -0.05
ACTN1-204ENST00000438964 TSGA10Q9BZW7 698 aa14.77□□□□□ -0.05
ACTN1-204ENST00000438964 NDST4Q9H3R1 872 aa14.77□□□□□ -0.05
ACTN1-204ENST00000438964 ADAMTS1Q9UHI8 967 aa14.77□□□□□ -0.05
ACTN1-204ENST00000438964 PLAGL2Q9UPG8 496 aa14.77□□□□□ -0.05
ACTN1-204ENST00000438964 CCDC194A0A1B0GVG4 234 aa14.76□□□□□ -0.05
ACTN1-204ENST00000438964 CCDC189A1A4V9 331 aa14.76□□□□□ -0.05
ACTN1-204ENST00000438964 MAGOHP61326 146 aaKnown RBP14.76□□□□□ -0.05
ACTN1-204ENST00000438964 DDR1Q08345 913 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms