RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 SAMSN1Q9NSI8 373 aaKnown RBP12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 PANK4Q9NVE7 773 aa12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 VPS18Q9P253 973 aa12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 QRICH1Q2TAL8 776 aa12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 ARHGEF16Q5VV41 709 aa12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 ENOX1Q8TC92 643 aaKnown RBP12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 FAM207AQ9NSI2 230 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 CTAGE9A4FU28 777 aa12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 CCDC122Q5T0U0 273 aa12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 LRCH2Q5VUJ6 765 aa12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 POTEAQ6S8J7 498 aa12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 CCDC84Q86UT8 332 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 CAPZA3Q96KX2 299 aa12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 PAGR1Q9BTK6 254 aa12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 BCCIPQ9P287 314 aaKnown RBP eCLIP12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 TACC1O75410 805 aa12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 RNF187Q5TA31 235 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 RCSD1Q6JBY9 416 aa12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 ERO1AQ96HE7 468 aa12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 RTFDC1Q9BY42 306 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 MTFR1LQ9H019 292 aa12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 ZNRF3Q9ULT6 936 aa12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 FOXN1O15353 648 aa12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 SMTNP53814 917 aa12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 SEC23AQ15436 765 aa12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 FAM83BQ5T0W9 1011 aa12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 ARMCX5Q6P1M9 558 aa12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 CYP26C1Q6V0L0 522 aa12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 TMTC1Q8IUR5 882 aa12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 ENGASEQ8NFI3 743 aa12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 CNTNAP5Q8WYK1 1306 aa12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 FAM170AA1A519 330 aa12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 CALUO43852 315 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 NUP58Q9BVL2 599 aa12.82□□□□□ -0.36
TRAPPC9-202ENST00000438773 PLSCR1O15162 318 aa12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 NFIAQ12857 509 aa12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 PPP1R13BQ96KQ4 1090 aa12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 GBP3Q9H0R5 595 aa12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 EPC1Q9H2F5 836 aa12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 STK17AQ9UEE5 414 aa12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 FBXO2Q9UK22 296 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 PCDHB13Q9Y5F0 798 aa12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 ABCC6O95255 1503 aa12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 PP2D1A8MPX8 630 aa12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 DPEP1P16444 411 aa12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 ATP2C1P98194 919 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 ZNF543Q08ER8 600 aa12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 SF3A3Q12874 501 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 SUPT20HL1Q3ZLR7 823 aa12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 ZNF658Q5TYW1 1059 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 USP49Q70CQ1 688 aa12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 FAM160B2Q86V87 743 aa12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 HERC5Q9UII4 1024 aaKnown RBP12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 RGPD2P0DJD1 1756 aa12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 POTEMA6NI47 508 aa12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 CACNB1Q02641 598 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 NTRK3Q16288 839 aa12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 FBXL16Q8N461 479 aa12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 TEKT3Q9BXF9 490 aa12.81□□□□□ -0.36
TRAPPC9-202ENST00000438773 SMIM22K7EJ46 135 aa12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 MEIS1O00470 390 aa12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 EXOC3O60645 756 aa12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 DKC1O60832 514 aaKnown RBP eCLIP12.8□□□□□ -0.364e-7■■■■■ 45.2
TRAPPC9-202ENST00000438773 PDHBP11177 359 aa12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 IL1R1P14778 569 aa12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 HOXA10P31260 410 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 DNM2P50570 870 aa12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 PRPF4BQ13523 1007 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 KRT26Q7Z3Y9 468 aa12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 SLF1Q9BQI6 1058 aa12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 NLRC4Q9NPP4 1024 aa12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 N4BP2Q86UW6 1770 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 CUL4BQ13620 913 aa12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 LRRC41Q15345 812 aa12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 ANKRD35Q8N283 1001 aa12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 RDH13Q8NBN7 331 aa12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 OR8K1Q8NGG5 319 aa12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 GDAQ9Y2T3 454 aa12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 RABGAP1Q9Y3P9 1069 aa12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 ERLIN2O94905 339 aa12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 COPB1P53618 953 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 ZNF577Q9BSK1 485 aa12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 DESI2Q9BSY9 194 aa12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 COL4A3BPQ9Y5P4 624 aa12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 PDS5AQ29RF7 1337 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-202ENST00000438773 CTAGE15A4D2H0 777 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 MYL1P05976 194 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 PRR29P0C7W0 189 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 CTAGE8P0CG41 777 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 USP14P54578 494 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 GADL1Q6ZQY3 521 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 CTAGE6Q86UF2 777 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 CTAGE4Q8IX94 777 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 MACROD2A1Z1Q3 448 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 GNPTABQ3T906 1256 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 FAM178BQ8IXR5 827 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 FAM212AQ96EL1 285 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 PNMA2Q9UL42 364 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 PCDHA6Q9UN73 950 aa12.79□□□□□ -0.36
TRAPPC9-202ENST00000438773 PCDHA8Q9Y5H6 950 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms