RNA–Protein interactions for RNA: ENST00000438356.1

RBM33-208, Transcript of RNA binding motif protein 33, human

TSL 4

Gene RBM33, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM33-208	ENST00000438356	RPS6KB1	P23443	525 aa		13.95	□□□□□ -0.18
RBM33-208	ENST00000438356	SMARCA1	P28370	1054 aa		13.95	□□□□□ -0.18
RBM33-208	ENST00000438356	BEX3	Q00994	111 aa		13.95	□□□□□ -0.18
RBM33-208	ENST00000438356		Q6ZUG5	572 aa		13.95	□□□□□ -0.18
RBM33-208	ENST00000438356	FANCB	Q8NB91	859 aa		13.95	□□□□□ -0.18
RBM33-208	ENST00000438356	RGS22	Q8NE09	1264 aa		13.95	□□□□□ -0.18
RBM33-208	ENST00000438356	PIBF1	Q8WXW3	757 aa		13.95	□□□□□ -0.18
RBM33-208	ENST00000438356	FAM161B	Q96MY7	647 aa		13.95	□□□□□ -0.18
RBM33-208	ENST00000438356	PIGS	Q96S52	555 aa		13.95	□□□□□ -0.18
RBM33-208	ENST00000438356	ABHD16B	Q9H3Z7	469 aa		13.95	□□□□□ -0.18
RBM33-208	ENST00000438356	RIOX1	Q9H6W3	641 aa		13.95	□□□□□ -0.18
RBM33-208	ENST00000438356	PDGFC	Q9NRA1	345 aa		13.95	□□□□□ -0.18
RBM33-208	ENST00000438356	PCDHA1	Q9Y5I3	950 aa		13.95	□□□□□ -0.18
RBM33-208	ENST00000438356	COL6A3	P12111	3177 aa		13.95	□□□□□ -0.18
RBM33-208	ENST00000438356	GOLGA8A	A7E2F4	631 aa		13.94	□□□□□ -0.18
RBM33-208	ENST00000438356	GOLGA8B	A8MQT2	603 aa		13.94	□□□□□ -0.18
RBM33-208	ENST00000438356	ASGR1	P07306	291 aa		13.94	□□□□□ -0.18
RBM33-208	ENST00000438356	RXRA	P19793	462 aa		13.94	□□□□□ -0.18
RBM33-208	ENST00000438356	PPP2R5B	Q15173	497 aa		13.94	□□□□□ -0.18
RBM33-208	ENST00000438356	RTN1	Q16799	776 aa		13.94	□□□□□ -0.18
RBM33-208	ENST00000438356	APOA5	Q6Q788	366 aa		13.94	□□□□□ -0.18
RBM33-208	ENST00000438356	SLC30A10	Q6XR72	485 aa		13.94	□□□□□ -0.18
RBM33-208	ENST00000438356	RAB11FIP4	Q86YS3	637 aa		13.94	□□□□□ -0.18
RBM33-208	ENST00000438356	SPZ1	Q9BXG8	430 aa		13.94	□□□□□ -0.18
RBM33-208	ENST00000438356	UPF3A	Q9H1J1	476 aa	Known RBP	13.94	□□□□□ -0.18
RBM33-208	ENST00000438356	LOC102724159	A0A0B4J2E5	919 aa		13.93	□□□□□ -0.18
RBM33-208	ENST00000438356	SMPD1	P17405	629 aa		13.93	□□□□□ -0.18
RBM33-208	ENST00000438356	CST5	P28325	142 aa	Predicted RBP	13.93	□□□□□ -0.18
RBM33-208	ENST00000438356	METAP2	P50579	478 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
RBM33-208	ENST00000438356	RCAN1	P53805	252 aa		13.93	□□□□□ -0.18
RBM33-208	ENST00000438356	GJA9	P57773	515 aa		13.93	□□□□□ -0.18
RBM33-208	ENST00000438356	ANAPC15	P60006	121 aa		13.93	□□□□□ -0.18
RBM33-208	ENST00000438356	RPS6	P62753	249 aa	Known RBP	13.93	□□□□□ -0.18
RBM33-208	ENST00000438356	FAAP100	Q0VG06	881 aa		13.93	□□□□□ -0.18
RBM33-208	ENST00000438356	PWP2	Q15269	919 aa	Known RBP	13.93	□□□□□ -0.18
RBM33-208	ENST00000438356	NOL8	Q76FK4	1167 aa	Known RBP	13.93	□□□□□ -0.18
RBM33-208	ENST00000438356	RUFY3	Q7L099	469 aa		13.93	□□□□□ -0.18
RBM33-208	ENST00000438356	CLEC4D	Q8WXI8	215 aa		13.93	□□□□□ -0.18
RBM33-208	ENST00000438356	BRF1	Q92994	677 aa		13.93	□□□□□ -0.18
RBM33-208	ENST00000438356	MTMR8	Q96EF0	704 aa		13.93	□□□□□ -0.18
RBM33-208	ENST00000438356	TSEN34	Q9BSV6	310 aa	Known RBP	13.93	□□□□□ -0.18
RBM33-208	ENST00000438356	TM6SF1	Q9BZW5	370 aa		13.93	□□□□□ -0.18
RBM33-208	ENST00000438356	SPC25	Q9HBM1	224 aa		13.93	□□□□□ -0.18
RBM33-208	ENST00000438356	MTMR10	Q9NXD2	777 aa		13.93	□□□□□ -0.18
RBM33-208	ENST00000438356	CDH23	Q9H251	3354 aa		13.93	□□□□□ -0.18
RBM33-208	ENST00000438356	MOXD2P	A6NHM9	499 aa		13.92	□□□□□ -0.18
RBM33-208	ENST00000438356	CFB	P00751	764 aa		13.92	□□□□□ -0.18
RBM33-208	ENST00000438356	CPA1	P15085	419 aa		13.92	□□□□□ -0.18
RBM33-208	ENST00000438356	PDE4D	Q08499	809 aa		13.92	□□□□□ -0.18
RBM33-208	ENST00000438356	TAPT1	Q6NXT6	567 aa		13.92	□□□□□ -0.18
RBM33-208	ENST00000438356	TMTC3	Q6ZXV5	915 aa		13.92	□□□□□ -0.18
RBM33-208	ENST00000438356	TLK2	Q86UE8	772 aa		13.92	□□□□□ -0.18
RBM33-208	ENST00000438356	CCDC82	Q8N4S0	544 aa		13.92	□□□□□ -0.18
RBM33-208	ENST00000438356	SAMD3	Q8N6K7	520 aa		13.92	□□□□□ -0.18
RBM33-208	ENST00000438356	DNER	Q8NFT8	737 aa		13.92	□□□□□ -0.18
RBM33-208	ENST00000438356	CUL5	Q93034	780 aa		13.92	□□□□□ -0.18
RBM33-208	ENST00000438356	GUCD1	Q96NT3	240 aa		13.92	□□□□□ -0.18
RBM33-208	ENST00000438356	ZSWIM6	Q9HCJ5	1215 aa		13.92	□□□□□ -0.18
RBM33-208	ENST00000438356	MAP3K20	Q9NYL2	800 aa	Known RBP	13.92	□□□□□ -0.18
RBM33-208	ENST00000438356	GNE	Q9Y223	722 aa	Known RBP	13.92	□□□□□ -0.18
RBM33-208	ENST00000438356	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.91	□□□□□ -0.18
RBM33-208	ENST00000438356	KIAA0355	O15063	1070 aa		13.91	□□□□□ -0.18
RBM33-208	ENST00000438356	PLEKHA8P1	O95397	391 aa		13.91	□□□□□ -0.18
RBM33-208	ENST00000438356	POLR2M	P0CAP2	368 aa		13.91	□□□□□ -0.18
RBM33-208	ENST00000438356	RAG1	P15918	1043 aa		13.91	□□□□□ -0.18
RBM33-208	ENST00000438356	AKAP17A	Q02040	695 aa	Known RBP	13.91	□□□□□ -0.18
RBM33-208	ENST00000438356	TNFAIP2	Q03169	654 aa		13.91	□□□□□ -0.18
RBM33-208	ENST00000438356	APOBR	Q0VD83	1088 aa		13.91	□□□□□ -0.18
RBM33-208	ENST00000438356	COL9A3	Q14050	684 aa	Predicted RBP	13.91	□□□□□ -0.18
RBM33-208	ENST00000438356	GNAS	Q5JWF2	1037 aa		13.91	□□□□□ -0.18
RBM33-208	ENST00000438356	GPR153	Q6NV75	609 aa		13.91	□□□□□ -0.18
RBM33-208	ENST00000438356	CXCL17	Q6UXB2	119 aa		13.91	□□□□□ -0.18
RBM33-208	ENST00000438356	ANKRD33	Q7Z3H0	272 aa		13.91	□□□□□ -0.18
RBM33-208	ENST00000438356	SRBD1	Q8N5C6	995 aa	Known RBP	13.91	□□□□□ -0.18
RBM33-208	ENST00000438356	NSUN6	Q8TEA1	469 aa	Known RBP	13.91	□□□□□ -0.18
RBM33-208	ENST00000438356	GLT1D1	Q96MS3	346 aa		13.91	□□□□□ -0.18
RBM33-208	ENST00000438356	UPF2	Q9HAU5	1272 aa	Known RBP	13.91	□□□□□ -0.18
RBM33-208	ENST00000438356	PDRG1	Q9NUG6	133 aa		13.91	□□□□□ -0.18
RBM33-208	ENST00000438356	TMEM39A	Q9NV64	488 aa		13.91	□□□□□ -0.18
RBM33-208	ENST00000438356	BRPF3	Q9ULD4	1205 aa		13.91	□□□□□ -0.18
RBM33-208	ENST00000438356	LAMA2	P24043	3122 aa	Known RBP	13.9	□□□□□ -0.18
RBM33-208	ENST00000438356	CYTH3	O43739	400 aa		13.9	□□□□□ -0.18
RBM33-208	ENST00000438356	ALDH5A1	P51649	535 aa	Predicted RBP	13.9	□□□□□ -0.18
RBM33-208	ENST00000438356	ARHGEF16	Q5VV41	709 aa		13.9	□□□□□ -0.18
RBM33-208	ENST00000438356	CMTR1	Q8N1G2	835 aa	Known RBP	13.9	□□□□□ -0.18
RBM33-208	ENST00000438356	FBXL16	Q8N461	479 aa		13.9	□□□□□ -0.18
RBM33-208	ENST00000438356	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.9	□□□□□ -0.18
RBM33-208	ENST00000438356	VTI1A	Q96AJ9	217 aa		13.9	□□□□□ -0.18
RBM33-208	ENST00000438356	RMDN3	Q96TC7	470 aa		13.9	□□□□□ -0.18
RBM33-208	ENST00000438356	UPF3B	Q9BZI7	483 aa	Known RBP	13.9	□□□□□ -0.18
RBM33-208	ENST00000438356	VTA1	Q9NP79	307 aa		13.9	□□□□□ -0.18
RBM33-208	ENST00000438356	TBX21	Q9UL17	535 aa		13.9	□□□□□ -0.18
RBM33-208	ENST00000438356	DYNC1LI2	O43237	492 aa	Predicted RBP	13.89	□□□□□ -0.19
RBM33-208	ENST00000438356	CDK7	P50613	346 aa		13.89	□□□□□ -0.19
RBM33-208	ENST00000438356	PSMC6	P62333	389 aa		13.89	□□□□□ -0.19
RBM33-208	ENST00000438356	ANKRD1	Q15327	319 aa		13.89	□□□□□ -0.19
RBM33-208	ENST00000438356	CPLX2	Q6PUV4	134 aa	Known RBP	13.89	□□□□□ -0.19
RBM33-208	ENST00000438356	HEATR3	Q7Z4Q2	680 aa		13.89	□□□□□ -0.19
RBM33-208	ENST00000438356	FAM126B	Q8IXS8	530 aa		13.89	□□□□□ -0.19
RBM33-208	ENST00000438356	PCSK9	Q8NBP7	692 aa	Known RBP	13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms