RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 PXMP2Q9NR77 195 aa18.86■□□□□ 0.61
CTSD-205ENST00000438213 PRPF3O43395 683 aaKnown RBP18.85■□□□□ 0.61
CTSD-205ENST00000438213 NR3C2P08235 984 aa18.85■□□□□ 0.61
CTSD-205ENST00000438213 LRRC41Q15345 812 aa18.85■□□□□ 0.61
CTSD-205ENST00000438213 GJC2Q5T442 439 aaPredicted RBP18.85■□□□□ 0.61
CTSD-205ENST00000438213 TEX2Q8IWB9 1127 aa18.85■□□□□ 0.61
CTSD-205ENST00000438213 FBXO16Q8IX29 292 aaPredicted RBP18.85■□□□□ 0.61
CTSD-205ENST00000438213 LARP6Q9BRS8 491 aaKnown RBP18.85■□□□□ 0.61
CTSD-205ENST00000438213 C22orf23Q9BZE7 217 aa18.85■□□□□ 0.61
CTSD-205ENST00000438213 DDX49Q9Y6V7 483 aaKnown RBP18.85■□□□□ 0.61
CTSD-205ENST00000438213 MCM3APO60318 1980 aa18.84■□□□□ 0.61
CTSD-205ENST00000438213 PIK3CDO00329 1044 aa18.84■□□□□ 0.61
CTSD-205ENST00000438213 EIF3JO75822 258 aaKnown RBP18.84■□□□□ 0.61
CTSD-205ENST00000438213 PGK1P00558 417 aa18.84■□□□□ 0.61
CTSD-205ENST00000438213 IFNAR1P17181 557 aa18.84■□□□□ 0.61
CTSD-205ENST00000438213 EIF2AK2P19525 551 aaKnown RBP18.84■□□□□ 0.61
CTSD-205ENST00000438213 ADCYAP1R1P41586 468 aa18.84■□□□□ 0.61
CTSD-205ENST00000438213 MNX1P50219 401 aaPredicted RBP18.84■□□□□ 0.61
CTSD-205ENST00000438213 NAPAP54920 295 aa18.84■□□□□ 0.61
CTSD-205ENST00000438213 DIS3LQ8TF46 1054 aaKnown RBP18.84■□□□□ 0.61
CTSD-205ENST00000438213 SCFD2Q8WU76 684 aa18.84■□□□□ 0.61
CTSD-205ENST00000438213 DPF3Q92784 378 aa18.84■□□□□ 0.61
CTSD-205ENST00000438213 GPKOWQ92917 476 aaPredicted RBP eCLIP18.84■□□□□ 0.61
CTSD-205ENST00000438213 WDR11Q9BZH6 1224 aa18.84■□□□□ 0.61
CTSD-205ENST00000438213 AP5M1Q9H0R1 490 aa18.84■□□□□ 0.61
CTSD-205ENST00000438213 GLT8D2Q9H1C3 349 aa18.84■□□□□ 0.61
CTSD-205ENST00000438213 SLKQ9H2G2 1235 aaPredicted RBP18.84■□□□□ 0.61
CTSD-205ENST00000438213 PDGFCQ9NRA1 345 aa18.84■□□□□ 0.61
CTSD-205ENST00000438213 Q9Y3F1 56 aa18.84■□□□□ 0.61
CTSD-205ENST00000438213 RBM47A0AV96 593 aaKnown RBP18.83■□□□□ 0.6
CTSD-205ENST00000438213 SSRP1Q08945 709 aaKnown RBP18.83■□□□□ 0.6
CTSD-205ENST00000438213 STK3Q13188 491 aa18.83■□□□□ 0.6
CTSD-205ENST00000438213 NTRK3Q16288 839 aa18.83■□□□□ 0.6
CTSD-205ENST00000438213 PFKFB3Q16875 520 aaPredicted RBP18.83■□□□□ 0.6
CTSD-205ENST00000438213 WWC2Q6AWC2 1192 aa18.83■□□□□ 0.6
CTSD-205ENST00000438213 PPP1R18Q6NYC8 613 aa18.83■□□□□ 0.6
CTSD-205ENST00000438213 USP17L6PQ6QN14 398 aa18.83■□□□□ 0.6
CTSD-205ENST00000438213 TRIM22Q8IYM9 498 aa18.83■□□□□ 0.6
CTSD-205ENST00000438213 PDCD2LQ9BRP1 358 aa18.83■□□□□ 0.6
CTSD-205ENST00000438213 TSEN34Q9BSV6 310 aaKnown RBP18.83■□□□□ 0.6
CTSD-205ENST00000438213 RNF26Q9BY78 433 aaPredicted RBP18.83■□□□□ 0.6
CTSD-205ENST00000438213 NCOA5Q9HCD5 579 aaKnown RBP18.83■□□□□ 0.6
CTSD-205ENST00000438213 BARHL2Q9NY43 387 aa18.83■□□□□ 0.6
CTSD-205ENST00000438213 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.82■□□□□ 0.6
CTSD-205ENST00000438213 MEIS2O14770 477 aa18.82■□□□□ 0.6
CTSD-205ENST00000438213 NKRFO15226 690 aaKnown RBP eCLIP18.82■□□□□ 0.6
CTSD-205ENST00000438213 C6orf222P0C671 652 aaPredicted RBP18.82■□□□□ 0.6
CTSD-205ENST00000438213 COL6A1P12109 1028 aa18.82■□□□□ 0.6
CTSD-205ENST00000438213 MYCLP12524 364 aaPredicted RBP18.82■□□□□ 0.6
CTSD-205ENST00000438213 SCG2P13521 617 aa18.82■□□□□ 0.6
CTSD-205ENST00000438213 SMPD1P17405 629 aa18.82■□□□□ 0.6
CTSD-205ENST00000438213 AK2P54819 239 aa18.82■□□□□ 0.6
CTSD-205ENST00000438213 GJA9P57773 515 aa18.82■□□□□ 0.6
CTSD-205ENST00000438213 TTLL4Q14679 1199 aa18.82■□□□□ 0.6
CTSD-205ENST00000438213 DUSP28Q4G0W2 176 aa18.82■□□□□ 0.6
CTSD-205ENST00000438213 VSIG10LQ86VR7 867 aa18.82■□□□□ 0.6
CTSD-205ENST00000438213 PCSK9Q8NBP7 692 aaKnown RBP18.82■□□□□ 0.6
CTSD-205ENST00000438213 CCDC12Q8WUD4 166 aaPredicted RBP18.82■□□□□ 0.6
CTSD-205ENST00000438213 PHKBQ93100 1093 aa18.82■□□□□ 0.6
CTSD-205ENST00000438213 LENG1Q96BZ8 264 aaPredicted RBP18.82■□□□□ 0.6
CTSD-205ENST00000438213 SLC26A6Q9BXS9 759 aa18.82■□□□□ 0.6
CTSD-205ENST00000438213 SENP6Q9GZR1 1112 aaPredicted RBP18.82■□□□□ 0.6
CTSD-205ENST00000438213 GNEQ9Y223 722 aaKnown RBP18.82■□□□□ 0.6
CTSD-205ENST00000438213 SYNRGQ9UMZ2 1314 aa18.81■□□□□ 0.6
CTSD-205ENST00000438213 SMCO2A6NFE2 343 aa18.81■□□□□ 0.6
CTSD-205ENST00000438213 DYNC1LI2O43237 492 aaPredicted RBP18.81■□□□□ 0.6
CTSD-205ENST00000438213 PFKFB2O60825 505 aa18.81■□□□□ 0.6
CTSD-205ENST00000438213 ADAMTS4O75173 837 aa18.81■□□□□ 0.6
CTSD-205ENST00000438213 CDKL5O76039 1030 aa18.81■□□□□ 0.6
CTSD-205ENST00000438213 CCND2P30279 289 aa18.81■□□□□ 0.6
CTSD-205ENST00000438213 RBM25P49756 843 aaKnown RBP18.81■□□□□ 0.6
CTSD-205ENST00000438213 PGM5Q15124 567 aa18.81■□□□□ 0.6
CTSD-205ENST00000438213 GNASQ5JWF2 1037 aa18.81■□□□□ 0.6
CTSD-205ENST00000438213 SEPT14Q6ZU15 432 aa18.81■□□□□ 0.6
CTSD-205ENST00000438213 KLHDC9Q8NEP7 349 aa18.81■□□□□ 0.6
CTSD-205ENST00000438213 UPF3AQ9H1J1 476 aaKnown RBP18.81■□□□□ 0.6
CTSD-205ENST00000438213 RIC8AQ9NPQ8 531 aa18.81■□□□□ 0.6
CTSD-205ENST00000438213 TPCN1Q9ULQ1 816 aa18.81■□□□□ 0.6
CTSD-205ENST00000438213 PDE4DIPQ5VU43 2346 aa18.8■□□□□ 0.6
CTSD-205ENST00000438213 SPDYE3A6NKU9 549 aa18.8■□□□□ 0.6
CTSD-205ENST00000438213 STXBP3O00186 592 aa18.8■□□□□ 0.6
CTSD-205ENST00000438213 ADCY6O43306 1168 aa18.8■□□□□ 0.6
CTSD-205ENST00000438213 ZEB2O60315 1214 aa18.8■□□□□ 0.6
CTSD-205ENST00000438213 TXNP10599 105 aaKnown RBP18.8■□□□□ 0.6
CTSD-205ENST00000438213 ADCY7P51828 1080 aa18.8■□□□□ 0.6
CTSD-205ENST00000438213 KCNA10Q16322 511 aa18.8■□□□□ 0.6
CTSD-205ENST00000438213 XRRA1Q6P2D8 792 aa18.8■□□□□ 0.6
CTSD-205ENST00000438213 KCNV1Q6PIU1 500 aa18.8■□□□□ 0.6
CTSD-205ENST00000438213 TLK2Q86UE8 772 aa18.8■□□□□ 0.6
CTSD-205ENST00000438213 EHMT1Q9H9B1 1298 aa18.8■□□□□ 0.6
CTSD-205ENST00000438213 PHF24Q9UPV7 400 aa18.8■□□□□ 0.6
CTSD-205ENST00000438213 LCTP09848 1927 aa18.8■□□□□ 0.6
CTSD-205ENST00000438213 BRCA2P51587 3418 aa18.8■□□□□ 0.6
CTSD-205ENST00000438213 MOXD2PA6NHM9 499 aa18.79■□□□□ 0.6
CTSD-205ENST00000438213 EVI5O60447 810 aa18.79■□□□□ 0.6
CTSD-205ENST00000438213 STAM2O75886 525 aa18.79■□□□□ 0.6
CTSD-205ENST00000438213 FOSP01100 380 aaPredicted RBP18.79■□□□□ 0.6
CTSD-205ENST00000438213 CST5P28325 142 aaPredicted RBP18.79■□□□□ 0.6
CTSD-205ENST00000438213 NKX3-2P78367 333 aa18.79■□□□□ 0.6
CTSD-205ENST00000438213 PKN1Q16512 942 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms