RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 CPXCR1Q8N123 301 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 ARHGEF1Q92888 912 aaKnown RBP12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 FAM212AQ96EL1 285 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 PPANQ9NQ55 473 aaKnown RBP12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 CNTNAP5Q8WYK1 1306 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 LRRC53A6NM62 1247 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 WNT7AO00755 349 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 FOXP2O15409 715 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 CALUO43852 315 aaPredicted RBP12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 TXNRD3Q86VQ6 643 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 CCDC50Q8IVM0 306 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 AP1M1Q9BXS5 423 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 THAP9Q9H5L6 903 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 ESYT3A0FGR9 886 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 KRT5P13647 590 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 KIF11P52732 1056 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 PHLDB2Q86SQ0 1253 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 TRIM58Q8NG06 486 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 MYCLP12524 364 aaPredicted RBP12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 TRAPPC10P48553 1259 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 MNAT1P51948 309 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 ERVK-24P63145 666 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 MAP2K1Q02750 393 aaPredicted RBP12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 VWA3BQ502W6 1294 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 DAAM2Q86T65 1068 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 CCDC155Q8N6L0 562 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 PCDHA1Q9Y5I3 950 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 BMP6P22004 513 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 CFAP221Q4G0U5 840 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 TTBK2Q6IQ55 1244 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 RIN2Q8WYP3 895 aaPredicted RBP12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 MS4A14Q96JA4 679 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 EHD2Q9NZN4 543 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 TOPAZ1Q8N9V7 1692 aa12.87□□□□□ -0.35
PDLIM5-206ENST00000437932 ANKRD62A6NC57 917 aa12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 USP17L10C9JJH3 530 aa12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 TOM1O60784 492 aa12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 PKN1Q16512 942 aa12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 MMS19Q96T76 1030 aa12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 EBAG9O00559 213 aa12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 HARSP12081 509 aaKnown RBP12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 EEF1GP26641 437 aaKnown RBP12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 IFI16Q16666 785 aaKnown RBP12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 ADD3Q9UEY8 706 aaKnown RBP12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 RIC1Q4ADV7 1423 aa12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 CLRN2A0PK11 232 aa12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 SERPINB2P05120 415 aa12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 PLEKP08567 350 aaPredicted RBP12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 GGCXP38435 758 aa12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 IFT20Q8IY31 132 aa12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 PNKPQ96T60 521 aa12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 FRMD4BQ9Y2L6 1034 aa12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 HYOU1Q9Y4L1 999 aa12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 PPEF1O14829 653 aaPredicted RBP12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 PRPF6O94906 941 aaKnown RBP12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 CCT5P48643 541 aa12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 PMS1P54277 932 aaKnown RBP12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 TNNC1P63316 161 aa12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 FAM26FQ5R3K3 315 aa12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 DDX12PQ92771 950 aa12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 NDST4Q9H3R1 872 aa12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 EPB41L5Q9HCM4 733 aa12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 FAM205AQ6ZU69 1335 aa12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 NALCNQ8IZF0 1738 aa12.86□□□□□ -0.35
PDLIM5-206ENST00000437932 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 CCDC169A6NNP5 214 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 NDUFAB1O14561 156 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 TRIM37O94972 964 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 TAL1P17542 331 aaPredicted RBP12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 TNFAIP3P21580 790 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 NFIXQ14938 502 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 DPH6Q7L8W6 267 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 DHTKD1Q96HY7 919 aaPredicted RBP12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 TACC3Q9Y6A5 838 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 DUSP10Q9Y6W6 482 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 LGALS16A8MUM7 142 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 E7EVH7 732 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 TUBB2AQ13885 445 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 RPS6KA1Q15418 735 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 TUBB2BQ9BVA1 445 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 SETD1AO15047 1707 aaKnown RBP12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 RGPD1P0DJD0 1748 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 FGFR2P21802 821 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 GRM4Q14833 912 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 CERKLQ49MI3 558 aaPredicted RBP12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 PCIF1Q9H4Z3 704 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 ADAM21Q9UKJ8 722 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 FHOD1Q9Y613 1164 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 EEF2P13639 858 aaKnown RBP12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 CTTNQ14247 550 aaKnown RBP12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 SEPT7Q16181 437 aaKnown RBP12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 CEP85LQ5SZL2 805 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 PEX26Q7Z412 305 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 CCDC114Q96M63 670 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 NR2F2P24468 414 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 CCNE1P24864 410 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 LIG3P49916 1009 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 GTF2A1P52655 376 aaPredicted RBP12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 MAP3K9P80192 1104 aa12.85□□□□□ -0.35
PDLIM5-206ENST00000437932 GRAPQ13588 217 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms