RNA–Protein interactions for RNA: ENST00000437844.6

ZEB1-204, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 6,246 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-204ENST00000437844 KLHL3Q9UH77 587 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 COL14A1Q05707 1796 aaKnown RBP6.94□□□□□ -1.3
ZEB1-204ENST00000437844 TECPR2O15040 1411 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 ZNF197O14709 1029 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 C21orf2O43822 256 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 ASNSP08243 561 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 PPP2R5BQ15173 497 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 PTPN14Q15678 1187 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 PLA2G4DQ86XP0 818 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 TEX12Q9BXU0 123 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 MRPL44Q9H9J2 332 aaKnown RBP6.94□□□□□ -1.3
ZEB1-204ENST00000437844 CTTNBP2NLQ9P2B4 639 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 PCDHB9Q9Y5E1 797 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 USH1CQ9Y6N9 552 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 SMARCA5O60264 1052 aaPredicted RBP6.94□□□□□ -1.3
ZEB1-204ENST00000437844 GCNT3O95395 438 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 BFSP1Q12934 665 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 DNAJC21Q5F1R6 531 aaKnown RBP6.94□□□□□ -1.3
ZEB1-204ENST00000437844 THNSL1Q8IYQ7 743 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 PLBD2Q8NHP8 589 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 KIF18AQ8NI77 898 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 ZSCAN18Q8TBC5 510 aaPredicted RBP6.94□□□□□ -1.3
ZEB1-204ENST00000437844 VPS50Q96JG6 964 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 VCXQ9H320 206 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 ARPP21Q9UBL0 812 aaPredicted RBP6.94□□□□□ -1.3
ZEB1-204ENST00000437844 MROH5Q6ZUA9 1318 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 ACTN4O43707 911 aaKnown RBP6.94□□□□□ -1.3
ZEB1-204ENST00000437844 ONECUT3O60422 494 aaPredicted RBP6.94□□□□□ -1.3
ZEB1-204ENST00000437844 CIB2O75838 187 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 UPP2O95045 317 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 RAG1P15918 1043 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 EVCP57679 992 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 CTR9Q6PD62 1173 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 SZRD1Q7Z422 152 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 TRIM48Q8IWZ4 208 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 FAM107BQ9H098 131 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 PCDHB8Q9UN66 801 aa6.94□□□□□ -1.3
ZEB1-204ENST00000437844 N4BP1O75113 896 aaKnown RBP6.93□□□□□ -1.3
ZEB1-204ENST00000437844 ATP1A1P05023 1023 aaKnown RBP6.93□□□□□ -1.3
ZEB1-204ENST00000437844 RARBP10826 455 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 CCND2P30279 289 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 SOX5P35711 763 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 ADCY1Q08828 1119 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 NSUN7Q8NE18 718 aaKnown RBP6.93□□□□□ -1.3
ZEB1-204ENST00000437844 MCUQ8NE86 351 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 SDCCAG3Q96C92 435 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 OTUD5Q96G74 571 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 FAM167AQ96KS9 214 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 NUP58Q9BVL2 599 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 TBC1D2Q9BYX2 928 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 DHX36Q9H2U1 1008 aaKnown RBP6.93□□□□□ -1.3
ZEB1-204ENST00000437844 SEPT9Q9UHD8 586 aaPredicted RBP6.93□□□□□ -1.3
ZEB1-204ENST00000437844 LEMD3Q9Y2U8 911 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 USP17L3A6NCW0 530 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 USP17L4A6NCW7 530 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 EYA2O00167 538 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 NEMFO60524 1076 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 TOMM70O94826 608 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 HSPA8P11142 646 aaKnown RBP6.93□□□□□ -1.3
ZEB1-204ENST00000437844 HOXC9P31274 260 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 GBP1P32455 592 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 USP17L1Q7RTZ2 530 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 RHPN1Q8TCX5 695 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 ALKBH8Q96BT7 664 aaKnown RBP6.93□□□□□ -1.3
ZEB1-204ENST00000437844 SLC38A10Q9HBR0 1119 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 LOC102724428A0A0B4J2F2 783 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 CELF2O95319 508 aaKnown RBP6.93□□□□□ -1.3
ZEB1-204ENST00000437844 ARL4AP40617 200 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 SIK1P57059 783 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 TTLL4Q14679 1199 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 THEMIS2Q5TEJ8 643 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 GTF3C2Q8WUA4 911 aaPredicted RBP6.93□□□□□ -1.3
ZEB1-204ENST00000437844 RSAD2Q8WXG1 361 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 TMEM169Q96HH4 297 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 CUEDC2Q9H467 287 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 DBNDD1Q9H9R9 158 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 KCNK9Q9NPC2 374 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 JRKLQ9Y4A0 524 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 PALLDQ8WX93 1383 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 PHLPP2Q6ZVD8 1323 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 I3L4J1 428 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 PRRG1O14668 218 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 CCNT1O60563 726 aaKnown RBP6.93□□□□□ -1.3
ZEB1-204ENST00000437844 FCER1AP12319 257 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 PMLP29590 882 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 CTCFP49711 727 aaPredicted RBP6.93□□□□□ -1.3
ZEB1-204ENST00000437844 CYP4A11Q02928 519 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 DEUP1Q05D60 604 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 STX1AQ16623 288 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 RINT1Q6NUQ1 792 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 ACAP3Q96P50 834 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 COG4Q9H9E3 785 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.93□□□□□ -1.31e-7■■■■■ 28.4
ZEB1-204ENST00000437844 SELENONQ9NZV5 590 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 C6orf203Q9P0P8 240 aaPredicted RBP6.93□□□□□ -1.3
ZEB1-204ENST00000437844 MAD1L1Q9Y6D9 718 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 IBTKQ9P2D0 1353 aaPredicted RBP6.93□□□□□ -1.3
ZEB1-204ENST00000437844 CLTCL1P53675 1640 aa6.93□□□□□ -1.3
ZEB1-204ENST00000437844 GPC4O75487 556 aa6.92□□□□□ -1.3
ZEB1-204ENST00000437844 MNAT1P51948 309 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms