RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 PPP4R3BQ5MIZ7 849 aa16.64■□□□□ 0.25
LINC01088-201ENST00000437737 TMCO2Q7Z6W1 182 aaPredicted RBP16.64■□□□□ 0.25
LINC01088-201ENST00000437737 CCDC155Q8N6L0 562 aa16.64■□□□□ 0.25
LINC01088-201ENST00000437737 UIMC1Q96RL1 719 aa16.64■□□□□ 0.25
LINC01088-201ENST00000437737 NACAP1Q9BZK3 213 aa16.64■□□□□ 0.25
LINC01088-201ENST00000437737 LRRCC1Q9C099 1032 aa16.64■□□□□ 0.25
LINC01088-201ENST00000437737 ECHDC1Q9NTX5 307 aa16.64■□□□□ 0.25
LINC01088-201ENST00000437737 SMARCA5O60264 1052 aaPredicted RBP16.63■□□□□ 0.25
LINC01088-201ENST00000437737 KPNA6O60684 536 aa16.63■□□□□ 0.25
LINC01088-201ENST00000437737 ZFYP08048 801 aaPredicted RBP16.63■□□□□ 0.25
LINC01088-201ENST00000437737 WDR5P61964 334 aaKnown RBP16.63■□□□□ 0.25
LINC01088-201ENST00000437737 CCDC96Q2M329 555 aa16.63■□□□□ 0.25
LINC01088-201ENST00000437737 LRRFIP1Q32MZ4 808 aaKnown RBP16.63■□□□□ 0.25
LINC01088-201ENST00000437737 RASGRP2Q7LDG7 609 aa16.63■□□□□ 0.25
LINC01088-201ENST00000437737 GJD3Q8N144 294 aa16.63■□□□□ 0.25
LINC01088-201ENST00000437737 UBE2ZQ9H832 354 aaPredicted RBP16.63■□□□□ 0.25
LINC01088-201ENST00000437737 LOC102724159A0A0B4J2E5 919 aa16.62■□□□□ 0.25
LINC01088-201ENST00000437737 RBM47A0AV96 593 aaKnown RBP16.62■□□□□ 0.25
LINC01088-201ENST00000437737 TSPY2A6NKD2 308 aa16.62■□□□□ 0.25
LINC01088-201ENST00000437737 NKRFO15226 690 aaKnown RBP eCLIP16.62■□□□□ 0.25
LINC01088-201ENST00000437737 CALML3P27482 149 aa16.62■□□□□ 0.25
LINC01088-201ENST00000437737 PPARAQ07869 468 aa16.62■□□□□ 0.25
LINC01088-201ENST00000437737 PDE4DQ08499 809 aa16.62■□□□□ 0.25
LINC01088-201ENST00000437737 PWP2Q15269 919 aaKnown RBP16.62■□□□□ 0.25
LINC01088-201ENST00000437737 PTGISQ16647 500 aa16.62■□□□□ 0.25
LINC01088-201ENST00000437737 CSPP1Q1MSJ5 1256 aa16.62■□□□□ 0.25
LINC01088-201ENST00000437737 MPHOSPH6Q99547 160 aaKnown RBP16.62■□□□□ 0.25
LINC01088-201ENST00000437737 NAPBQ9H115 298 aa16.62■□□□□ 0.25
LINC01088-201ENST00000437737 ZBTB40Q9NUA8 1239 aa16.62■□□□□ 0.25
LINC01088-201ENST00000437737 NFIBO00712 420 aa16.61■□□□□ 0.25
LINC01088-201ENST00000437737 KCNA5P22460 613 aa16.61■□□□□ 0.25
LINC01088-201ENST00000437737 DEFB103AP81534 67 aa16.61■□□□□ 0.25
LINC01088-201ENST00000437737 SLC30A10Q6XR72 485 aa16.61■□□□□ 0.25
LINC01088-201ENST00000437737 FAM178BQ8IXR5 827 aa16.61■□□□□ 0.25
LINC01088-201ENST00000437737 CAGE1Q8TC20 777 aa16.61■□□□□ 0.25
LINC01088-201ENST00000437737 AFAP1L1Q8TED9 768 aa16.61■□□□□ 0.25
LINC01088-201ENST00000437737 COPS5Q92905 334 aa16.61■□□□□ 0.25
LINC01088-201ENST00000437737 GPATCH3Q96I76 525 aa16.61■□□□□ 0.25
LINC01088-201ENST00000437737 RANBP17Q9H2T7 1088 aaKnown RBP16.61■□□□□ 0.25
LINC01088-201ENST00000437737 SUGCTQ9HAC7 445 aa16.61■□□□□ 0.25
LINC01088-201ENST00000437737 PIEZO1Q92508 2521 aa16.61■□□□□ 0.25
LINC01088-201ENST00000437737 A6NJR5 290 aa16.6■□□□□ 0.25
LINC01088-201ENST00000437737 TXNP10599 105 aaKnown RBP16.6■□□□□ 0.25
LINC01088-201ENST00000437737 ALADP13716 330 aa16.6■□□□□ 0.25
LINC01088-201ENST00000437737 IL9P15248 144 aa16.6■□□□□ 0.25
LINC01088-201ENST00000437737 LEXMQ3ZCV2 418 aa16.6■□□□□ 0.25
LINC01088-201ENST00000437737 CNKSR3Q6P9H4 555 aa16.6■□□□□ 0.25
LINC01088-201ENST00000437737 SCFD2Q8WU76 684 aa16.6■□□□□ 0.25
LINC01088-201ENST00000437737 TGS1Q96RS0 853 aaKnown RBP16.6■□□□□ 0.25
LINC01088-201ENST00000437737 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.59■□□□□ 0.25
LINC01088-201ENST00000437737 NMT2O60551 498 aa16.59■□□□□ 0.25
LINC01088-201ENST00000437737 SELPP16109 830 aa16.59■□□□□ 0.25
LINC01088-201ENST00000437737 SLC16A2P36021 539 aa16.59■□□□□ 0.25
LINC01088-201ENST00000437737 MRE11P49959 708 aa16.59■□□□□ 0.25
LINC01088-201ENST00000437737 ERVK-21P61565 698 aa16.59■□□□□ 0.25
LINC01088-201ENST00000437737 TSHZ3Q63HK5 1081 aa16.59■□□□□ 0.25
LINC01088-201ENST00000437737 PTCRAQ6ISU1 281 aaPredicted RBP16.59■□□□□ 0.25
LINC01088-201ENST00000437737 RNF207Q6ZRF8 634 aa16.59■□□□□ 0.25
LINC01088-201ENST00000437737 LRRC8DQ7L1W4 858 aa16.59■□□□□ 0.25
LINC01088-201ENST00000437737 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.59■□□□□ 0.25
LINC01088-201ENST00000437737 DCAF4Q8WV16 495 aa16.59■□□□□ 0.25
LINC01088-201ENST00000437737 RAD9AQ99638 391 aa16.59■□□□□ 0.25
LINC01088-201ENST00000437737 LINC01553A4QN01 128 aa16.58■□□□□ 0.24
LINC01088-201ENST00000437737 GJB5O95377 273 aa16.58■□□□□ 0.24
LINC01088-201ENST00000437737 SYDE2Q5VT97 1194 aa16.58■□□□□ 0.24
LINC01088-201ENST00000437737 TTBK2Q6IQ55 1244 aa16.58■□□□□ 0.24
LINC01088-201ENST00000437737 FAM117BQ6P1L5 589 aa16.58■□□□□ 0.24
LINC01088-201ENST00000437737 CCDC136Q96JN2 1154 aa16.58■□□□□ 0.24
LINC01088-201ENST00000437737 SEC62Q99442 399 aaKnown RBP16.58■□□□□ 0.24
LINC01088-201ENST00000437737 IL17RBQ9NRM6 502 aa16.58■□□□□ 0.24
LINC01088-201ENST00000437737 FRMPD2Q68DX3 1309 aaPredicted RBP16.57■□□□□ 0.24
LINC01088-201ENST00000437737 ABHD14A-ACY1A0A1B0GW23 586 aa16.57■□□□□ 0.24
LINC01088-201ENST00000437737 B4DLN1 442 aa16.57■□□□□ 0.24
LINC01088-201ENST00000437737 PARNO95453 639 aaKnown RBP16.57■□□□□ 0.24
LINC01088-201ENST00000437737 MRPL12P52815 198 aaKnown RBP16.57■□□□□ 0.24
LINC01088-201ENST00000437737 GPNMBQ14956 572 aa16.57■□□□□ 0.24
LINC01088-201ENST00000437737 GDF6Q6KF10 455 aaPredicted RBP16.57■□□□□ 0.24
LINC01088-201ENST00000437737 RANBP6O60518 1105 aaKnown RBP16.56■□□□□ 0.24
LINC01088-201ENST00000437737 RPS6P62753 249 aaKnown RBP16.56■□□□□ 0.24
LINC01088-201ENST00000437737 CTDSPL2Q05D32 466 aa16.56■□□□□ 0.24
LINC01088-201ENST00000437737 FBXO22Q8NEZ5 403 aa16.56■□□□□ 0.24
LINC01088-201ENST00000437737 GPCPD1Q9NPB8 672 aa16.56■□□□□ 0.24
LINC01088-201ENST00000437737 INCENPQ9NQS7 918 aa16.56■□□□□ 0.24
LINC01088-201ENST00000437737 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.56■□□□□ 0.24
LINC01088-201ENST00000437737 NBNO60934 754 aa16.55■□□□□ 0.24
LINC01088-201ENST00000437737 EFCAB14O75071 495 aa16.55■□□□□ 0.24
LINC01088-201ENST00000437737 ARIH2O95376 493 aa16.55■□□□□ 0.24
LINC01088-201ENST00000437737 CXCL10P02778 98 aa16.55■□□□□ 0.24
LINC01088-201ENST00000437737 MMP3P08254 477 aa16.55■□□□□ 0.24
LINC01088-201ENST00000437737 CKBP12277 381 aa16.55■□□□□ 0.24
LINC01088-201ENST00000437737 EDNRBP24530 442 aa16.55■□□□□ 0.24
LINC01088-201ENST00000437737 NHLH1Q02575 133 aa16.55■□□□□ 0.24
LINC01088-201ENST00000437737 IKBKEQ14164 716 aa16.55■□□□□ 0.24
LINC01088-201ENST00000437737 PUS10Q3MIT2 529 aaKnown RBP16.55■□□□□ 0.24
LINC01088-201ENST00000437737 BTNL9Q6UXG8 535 aa16.55■□□□□ 0.24
LINC01088-201ENST00000437737 SESTD1Q86VW0 696 aa16.55■□□□□ 0.24
LINC01088-201ENST00000437737 DNERQ8NFT8 737 aa16.55■□□□□ 0.24
LINC01088-201ENST00000437737 AFG1LQ8WV93 481 aa16.55■□□□□ 0.24
LINC01088-201ENST00000437737 CLEC4DQ8WXI8 215 aa16.55■□□□□ 0.24
LINC01088-201ENST00000437737 DHX38Q92620 1227 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms