RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 PSMC2P35998 433 aaKnown RBP17.33■□□□□ 0.36
PTPN13-204ENST00000436978 LONRF3Q496Y0 759 aa17.33■□□□□ 0.36
PTPN13-204ENST00000436978 FAM26FQ5R3K3 315 aa17.33■□□□□ 0.36
PTPN13-204ENST00000436978 SCYL2Q6P3W7 929 aa17.33■□□□□ 0.36
PTPN13-204ENST00000436978 USH1CQ9Y6N9 552 aa17.33■□□□□ 0.36
PTPN13-204ENST00000436978 ADKP55263 362 aaKnown RBP17.33■□□□□ 0.36
PTPN13-204ENST00000436978 NACC1Q96RE7 527 aa17.33■□□□□ 0.36
PTPN13-204ENST00000436978 A0A1W2PQ27 194 aa17.33■□□□□ 0.36
PTPN13-204ENST00000436978 A0A1W2PQ64 194 aa17.33■□□□□ 0.36
PTPN13-204ENST00000436978 A0A1W2PQD8 194 aa17.33■□□□□ 0.36
PTPN13-204ENST00000436978 ADCY8P40145 1251 aa17.33■□□□□ 0.36
PTPN13-204ENST00000436978 GARSP41250 739 aaKnown RBP17.33■□□□□ 0.36
PTPN13-204ENST00000436978 ALCAMQ13740 583 aa17.33■□□□□ 0.36
PTPN13-204ENST00000436978 PHLDB2Q86SQ0 1253 aa17.33■□□□□ 0.36
PTPN13-204ENST00000436978 NLRP10Q86W26 655 aa17.33■□□□□ 0.36
PTPN13-204ENST00000436978 TSC1Q92574 1164 aa17.33■□□□□ 0.36
PTPN13-204ENST00000436978 MED7O43513 233 aa17.33■□□□□ 0.36
PTPN13-204ENST00000436978 SYDE2Q5VT97 1194 aa17.33■□□□□ 0.36
PTPN13-204ENST00000436978 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.33■□□□□ 0.36
PTPN13-204ENST00000436978 MAP2P11137 1827 aaKnown RBP17.33■□□□□ 0.36
PTPN13-204ENST00000436978 MAP7D3Q8IWC1 876 aa17.33■□□□□ 0.36
PTPN13-204ENST00000436978 MAP3K21Q5TCX8 1036 aa17.32■□□□□ 0.36
PTPN13-204ENST00000436978 DISC1Q9NRI5 854 aa17.32■□□□□ 0.36
PTPN13-204ENST00000436978 SEPT10Q9P0V9 454 aa17.32■□□□□ 0.36
PTPN13-204ENST00000436978 BRD3Q15059 726 aa17.32■□□□□ 0.36
PTPN13-204ENST00000436978 DDX41Q9UJV9 622 aaKnown RBP17.32■□□□□ 0.36
PTPN13-204ENST00000436978 PCDHB4Q9Y5E5 795 aa17.32■□□□□ 0.36
PTPN13-204ENST00000436978 ERBB3P21860 1342 aa17.32■□□□□ 0.36
PTPN13-204ENST00000436978 TROVE2P10155 538 aaKnown RBP eCLIP17.32■□□□□ 0.36
PTPN13-204ENST00000436978 BMP3P12645 472 aa17.32■□□□□ 0.36
PTPN13-204ENST00000436978 PPM1KQ8N3J5 372 aa17.32■□□□□ 0.36
PTPN13-204ENST00000436978 MAP4K1Q92918 833 aa17.32■□□□□ 0.36
PTPN13-204ENST00000436978 GSDMAQ96QA5 445 aa17.32■□□□□ 0.36
PTPN13-204ENST00000436978 POLR3EQ9NVU0 708 aa17.32■□□□□ 0.36
PTPN13-204ENST00000436978 ABL1P00519 1130 aa17.32■□□□□ 0.36
PTPN13-204ENST00000436978 ADD1P35611 737 aaKnown RBP17.32■□□□□ 0.36
PTPN13-204ENST00000436978 OSBPL3Q9H4L5 887 aa17.32■□□□□ 0.36
PTPN13-204ENST00000436978 EEF1GP26641 437 aaKnown RBP17.32■□□□□ 0.36
PTPN13-204ENST00000436978 KCTD1Q719H9 257 aa17.32■□□□□ 0.36
PTPN13-204ENST00000436978 FAM160B2Q86V87 743 aa17.32■□□□□ 0.36
PTPN13-204ENST00000436978 ARHGEF2Q92974 986 aaKnown RBP17.32■□□□□ 0.36
PTPN13-204ENST00000436978 PSMB7Q99436 277 aa17.32■□□□□ 0.36
PTPN13-204ENST00000436978 ITKQ08881 620 aa17.32■□□□□ 0.36
PTPN13-204ENST00000436978 BSDC1Q9NW68 430 aaPredicted RBP17.32■□□□□ 0.36
PTPN13-204ENST00000436978 NDUFA8P51970 172 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 SLC39A2Q9NP94 309 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 DBNLQ9UJU6 430 aaKnown RBP17.31■□□□□ 0.36
PTPN13-204ENST00000436978 MYO3BQ8WXR4 1341 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 PASKQ96RG2 1323 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 NRKQ7Z2Y5 1582 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 IRX4P78413 519 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 SATB1Q01826 763 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 TRIM56Q9BRZ2 755 aaKnown RBP17.31■□□□□ 0.36
PTPN13-204ENST00000436978 SEPT14Q6ZU15 432 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 USP28Q96RU2 1077 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 CCDC68Q9H2F9 335 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 CPSF1Q10570 1443 aaKnown RBP17.31■□□□□ 0.36
PTPN13-204ENST00000436978 GOLGA8QA0A0J9YX86 632 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 GOLGA8OA6NCC3 632 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 GOLGA8NF8WBI6 632 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 SORBS3O60504 671 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 IGBP1P78318 339 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 TSNAXIP1Q2TAA8 658 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 C10orf76Q5T2E6 689 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 SESTD1Q86VW0 696 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 FBXO18Q8NFZ0 1043 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 PALLDQ8WX93 1383 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 PPP2R5CQ13362 524 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 SNX25Q9H3E2 840 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 PCDHA7Q9UN72 937 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 MADDQ8WXG6 1647 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 OVOS2A0A0G2JMS6 1433 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 OVOS2A0A0J9YW53 1432 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 OVOS2Q6IE36 1432 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 POLR2FP61218 127 aaKnown RBP17.31■□□□□ 0.36
PTPN13-204ENST00000436978 CLEC4GQ6UXB4 293 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 CNOT6LQ96LI5 555 aaKnown RBP17.31■□□□□ 0.36
PTPN13-204ENST00000436978 KMT5AQ9NQR1 393 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 ABCA6Q8N139 1617 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 GRAPQ13588 217 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 RPS6KA2Q15349 733 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 SURF1Q15526 300 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 BBS5Q8N3I7 341 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 MYRIPQ8NFW9 859 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 GRAPLQ8TC17 118 aaPredicted RBP17.31■□□□□ 0.36
PTPN13-204ENST00000436978 NT5C1BQ96P26 610 aa17.31■□□□□ 0.36
PTPN13-204ENST00000436978 ATF2P15336 505 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 CTNNA1P35221 906 aaKnown RBP17.3■□□□□ 0.36
PTPN13-204ENST00000436978 RILPQ96NA2 401 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 SH3GLB2Q9NR46 395 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 TCP1P17987 556 aaKnown RBP17.3■□□□□ 0.36
PTPN13-204ENST00000436978 BSPRYQ5W0U4 402 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 ZHX1Q9UKY1 873 aaPredicted RBP17.3■□□□□ 0.36
PTPN13-204ENST00000436978 LRFN2Q9ULH4 789 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 TULP4Q9NRJ4 1543 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 ELF2Q15723 593 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 LMNTD2Q8IXW0 634 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.3■□□□□ 0.36
PTPN13-204ENST00000436978 MYO1EQ12965 1108 aa17.3■□□□□ 0.36
PTPN13-204ENST00000436978 MAPK8IP2Q13387 824 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms