RNA–Protein interactions for RNA: ENST00000436040.6

APTX-208, Transcript of aprataxin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene APTX, Length 2,168 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-208ENST00000436040 LCTP09848 1927 aa13.31□□□□□ -0.28
APTX-208ENST00000436040 PFASO15067 1338 aa13.3□□□□□ -0.28
APTX-208ENST00000436040 DNAJC25-GNG10A0A024R161 153 aa13.3□□□□□ -0.28
APTX-208ENST00000436040 METAP2P50579 478 aaKnown RBP eCLIP13.3□□□□□ -0.28
APTX-208ENST00000436040 ANKRD35Q8N283 1001 aa13.3□□□□□ -0.28
APTX-208ENST00000436040 PHKBQ93100 1093 aa13.3□□□□□ -0.28
APTX-208ENST00000436040 IGHA2P01877 340 aa13.3□□□□□ -0.28
APTX-208ENST00000436040 UBXN2AP68543 259 aa13.3□□□□□ -0.28
APTX-208ENST00000436040 TRAF1Q13077 416 aa13.3□□□□□ -0.28
APTX-208ENST00000436040 CCL14Q16627 93 aa13.3□□□□□ -0.28
APTX-208ENST00000436040 ZNF792Q3KQV3 632 aa13.3□□□□□ -0.28
APTX-208ENST00000436040 OLFML2BQ68BL8 750 aa13.3□□□□□ -0.28
APTX-208ENST00000436040 HOMER1Q86YM7 354 aa13.3□□□□□ -0.28
APTX-208ENST00000436040 CLEC4DQ8WXI8 215 aa13.3□□□□□ -0.28
APTX-208ENST00000436040 DDX11Q96FC9 970 aa13.3□□□□□ -0.28
APTX-208ENST00000436040 PIGSQ96S52 555 aa13.3□□□□□ -0.28
APTX-208ENST00000436040 AMNQ9BXJ7 453 aa13.3□□□□□ -0.28
APTX-208ENST00000436040 MAF1Q9H063 256 aa13.3□□□□□ -0.28
APTX-208ENST00000436040 GDPD2Q9HCC8 539 aa13.3□□□□□ -0.28
APTX-208ENST00000436040 A1CFQ9NQ94 594 aaKnown RBP13.3□□□□□ -0.28
APTX-208ENST00000436040 PNMA6FA0A0J9YX94 578 aa13.29□□□□□ -0.28
APTX-208ENST00000436040 STX6O43752 255 aa13.29□□□□□ -0.28
APTX-208ENST00000436040 INHAP05111 366 aa13.29□□□□□ -0.28
APTX-208ENST00000436040 PGK2P07205 417 aa13.29□□□□□ -0.28
APTX-208ENST00000436040 CCDC192P0DO97 292 aa13.29□□□□□ -0.28
APTX-208ENST00000436040 USH1GQ495M9 461 aa13.29□□□□□ -0.28
APTX-208ENST00000436040 RRP36Q96EU6 259 aaKnown RBP13.29□□□□□ -0.28
APTX-208ENST00000436040 ZNF274Q96GC6 653 aaPredicted RBP13.29□□□□□ -0.28
APTX-208ENST00000436040 FUCA2Q9BTY2 467 aa13.29□□□□□ -0.28
APTX-208ENST00000436040 FLRT1Q9NZU1 646 aa13.29□□□□□ -0.28
APTX-208ENST00000436040 TCHHQ07283 1943 aa13.29□□□□□ -0.28
APTX-208ENST00000436040 CCDC196A0A1B0GTZ2 297 aa13.28□□□□□ -0.28
APTX-208ENST00000436040 PPP1R11O60927 126 aaPredicted RBP13.28□□□□□ -0.28
APTX-208ENST00000436040 CTDNEP1O95476 244 aa13.28□□□□□ -0.28
APTX-208ENST00000436040 FUT2Q10981 343 aa13.28□□□□□ -0.28
APTX-208ENST00000436040 NTRK3Q16288 839 aa13.28□□□□□ -0.28
APTX-208ENST00000436040 CCDC83Q8IWF9 413 aa13.28□□□□□ -0.28
APTX-208ENST00000436040 MAML3Q96JK9 1138 aa13.28□□□□□ -0.28
APTX-208ENST00000436040 CYP39A1Q9NYL5 469 aa13.28□□□□□ -0.28
APTX-208ENST00000436040 BIN2Q9UBW5 565 aaPredicted RBP13.28□□□□□ -0.28
APTX-208ENST00000436040 LIMCH1Q9UPQ0 1083 aa13.28□□□□□ -0.28
APTX-208ENST00000436040 MRPL11Q9Y3B7 192 aaKnown RBP13.28□□□□□ -0.28
APTX-208ENST00000436040 CNTNAP5Q8WYK1 1306 aa13.28□□□□□ -0.28
APTX-208ENST00000436040 NFIBO00712 420 aa13.28□□□□□ -0.28
APTX-208ENST00000436040 ZNF467Q7Z7K2 595 aaPredicted RBP13.28□□□□□ -0.28
APTX-208ENST00000436040 RGS22Q8NE09 1264 aa13.28□□□□□ -0.28
APTX-208ENST00000436040 OGFRQ9NZT2 677 aa13.28□□□□□ -0.28
APTX-208ENST00000436040 CNPY2Q9Y2B0 182 aa13.28□□□□□ -0.28
APTX-208ENST00000436040 RIOK3O14730 519 aaKnown RBP13.27□□□□□ -0.28
APTX-208ENST00000436040 JAK2O60674 1132 aa13.27□□□□□ -0.28
APTX-208ENST00000436040 PFKFB2O60825 505 aa13.27□□□□□ -0.28
APTX-208ENST00000436040 F13A1P00488 732 aa13.27□□□□□ -0.28
APTX-208ENST00000436040 ANKRD1Q15327 319 aa13.27□□□□□ -0.28
APTX-208ENST00000436040 MAP3K21Q5TCX8 1036 aa13.27□□□□□ -0.28
APTX-208ENST00000436040 MFSD14CQ5VZR4 134 aa13.27□□□□□ -0.28
APTX-208ENST00000436040 NSMFQ6X4W1 530 aa13.27□□□□□ -0.28
APTX-208ENST00000436040 MSL3Q8N5Y2 521 aaKnown RBP13.27□□□□□ -0.28
APTX-208ENST00000436040 FAM133AQ8N9E0 248 aa13.27□□□□□ -0.28
APTX-208ENST00000436040 SEC63Q9UGP8 760 aaKnown RBP13.27□□□□□ -0.28
APTX-208ENST00000436040 SMC3Q9UQE7 1217 aa13.27□□□□□ -0.28
APTX-208ENST00000436040 POTEB2H3BUK9 544 aa13.27□□□□□ -0.29
APTX-208ENST00000436040 MCF2L2Q86YR7 1114 aa13.27□□□□□ -0.29
APTX-208ENST00000436040 AIFM3Q96NN9 605 aa13.27□□□□□ -0.29
APTX-208ENST00000436040 GJB4Q9NTQ9 266 aa13.27□□□□□ -0.29
APTX-208ENST00000436040 PAXBP1Q9Y5B6 917 aa13.27□□□□□ -0.29
APTX-208ENST00000436040 PCDHA1Q9Y5I3 950 aa13.27□□□□□ -0.29
APTX-208ENST00000436040 V9GY48 417 aaPredicted RBP13.27□□□□□ -0.29
APTX-208ENST00000436040 MCM3APO60318 1980 aa13.26□□□□□ -0.29
APTX-208ENST00000436040 PLCB2Q00722 1185 aa13.26□□□□□ -0.29
APTX-208ENST00000436040 TRIM32Q13049 653 aa13.26□□□□□ -0.29
APTX-208ENST00000436040 FOXD4L6Q3SYB3 417 aaPredicted RBP13.26□□□□□ -0.29
APTX-208ENST00000436040 MAMDC4Q6UXC1 1216 aa13.26□□□□□ -0.29
APTX-208ENST00000436040 FOXD4L3Q6VB84 417 aaPredicted RBP13.26□□□□□ -0.29
APTX-208ENST00000436040 RNF207Q6ZRF8 634 aa13.26□□□□□ -0.29
APTX-208ENST00000436040 GTF3C6Q969F1 213 aa13.26□□□□□ -0.29
APTX-208ENST00000436040 FGD4Q96M96 766 aa13.26□□□□□ -0.29
APTX-208ENST00000436040 PTPDC1A2A3K4 754 aa13.25□□□□□ -0.29
APTX-208ENST00000436040 CCDC85CA6NKD9 419 aa13.25□□□□□ -0.29
APTX-208ENST00000436040 LRRC37A2A6NM11 1700 aa13.25□□□□□ -0.29
APTX-208ENST00000436040 CCL5P13501 91 aa13.25□□□□□ -0.29
APTX-208ENST00000436040 PRKAR2AP13861 404 aaKnown RBP13.25□□□□□ -0.29
APTX-208ENST00000436040 SYT1P21579 422 aa13.25□□□□□ -0.29
APTX-208ENST00000436040 GHRHRQ02643 423 aa13.25□□□□□ -0.29
APTX-208ENST00000436040 CACNB2Q08289 660 aaPredicted RBP13.25□□□□□ -0.29
APTX-208ENST00000436040 BAATQ14032 418 aaPredicted RBP13.25□□□□□ -0.29
APTX-208ENST00000436040 MTFR1Q15390 333 aa13.25□□□□□ -0.29
APTX-208ENST00000436040 SAMD3Q8N6K7 520 aa13.25□□□□□ -0.29
APTX-208ENST00000436040 TSC1Q92574 1164 aa13.25□□□□□ -0.29
APTX-208ENST00000436040 GPKOWQ92917 476 aaPredicted RBP eCLIP13.25□□□□□ -0.299e-6■■□□□ 14.5
APTX-208ENST00000436040 SHISA4Q96DD7 197 aa13.25□□□□□ -0.29
APTX-208ENST00000436040 CGNQ9P2M7 1197 aaKnown RBP13.25□□□□□ -0.29
APTX-208ENST00000436040 RPTORQ8N122 1335 aa13.25□□□□□ -0.29
APTX-208ENST00000436040 SYNGAP1Q96PV0 1343 aa13.25□□□□□ -0.29
APTX-208ENST00000436040 FRMPD3Q5JV73 1810 aa13.25□□□□□ -0.29
APTX-208ENST00000436040 OPLAHO14841 1288 aa13.25□□□□□ -0.29
APTX-208ENST00000436040 ADAMTS3O15072 1205 aa13.25□□□□□ -0.29
APTX-208ENST00000436040 CYP2C19P33261 490 aa13.25□□□□□ -0.29
APTX-208ENST00000436040 RPS6P62753 249 aaKnown RBP13.25□□□□□ -0.29
APTX-208ENST00000436040 CNTN2Q02246 1040 aa13.25□□□□□ -0.29
APTX-208ENST00000436040 GABPB1Q06547 395 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms