RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 RPN1P04843 607 aaKnown RBP17.16■□□□□ 0.34
NEDD4-202ENST00000435532 ELF1P32519 619 aa17.16■□□□□ 0.34
NEDD4-202ENST00000435532 MTERF2Q49AM1 385 aa17.16■□□□□ 0.34
NEDD4-202ENST00000435532 SRGAP1Q7Z6B7 1085 aa17.16■□□□□ 0.34
NEDD4-202ENST00000435532 TRERF1Q96PN7 1200 aa17.16■□□□□ 0.34
NEDD4-202ENST00000435532 PLCD4Q9BRC7 762 aa17.16■□□□□ 0.34
NEDD4-202ENST00000435532 ABCC12Q96J65 1359 aa17.16■□□□□ 0.34
NEDD4-202ENST00000435532 FAM107BQ9H098 131 aa17.16■□□□□ 0.34
NEDD4-202ENST00000435532 STK17AQ9UEE5 414 aa17.16■□□□□ 0.34
NEDD4-202ENST00000435532 IGKV5-2P06315 115 aa17.15■□□□□ 0.34
NEDD4-202ENST00000435532 MAGEA1P43355 309 aa17.15■□□□□ 0.34
NEDD4-202ENST00000435532 ADAM9Q13443 819 aa17.15■□□□□ 0.34
NEDD4-202ENST00000435532 PNOCQ13519 176 aa17.15■□□□□ 0.34
NEDD4-202ENST00000435532 PRR5LQ6MZQ0 368 aa17.15■□□□□ 0.34
NEDD4-202ENST00000435532 STAG1Q8WVM7 1258 aa17.15■□□□□ 0.34
NEDD4-202ENST00000435532 MYO1AQ9UBC5 1043 aa17.15■□□□□ 0.34
NEDD4-202ENST00000435532 PIK3C2BO00750 1634 aa17.15■□□□□ 0.34
NEDD4-202ENST00000435532 DCCP43146 1447 aa17.15■□□□□ 0.34
NEDD4-202ENST00000435532 LIFRP42702 1097 aa17.15■□□□□ 0.34
NEDD4-202ENST00000435532 ITIH3Q06033 890 aa17.15■□□□□ 0.34
NEDD4-202ENST00000435532 PPP1R18Q6NYC8 613 aa17.15■□□□□ 0.34
NEDD4-202ENST00000435532 LINC00116Q8NCU8 138 aa17.15■□□□□ 0.34
NEDD4-202ENST00000435532 NSUN6Q8TEA1 469 aaKnown RBP17.15■□□□□ 0.34
NEDD4-202ENST00000435532 HAUS1Q96CS2 278 aa17.15■□□□□ 0.34
NEDD4-202ENST00000435532 ZFYVE28Q9HCC9 887 aa17.15■□□□□ 0.34
NEDD4-202ENST00000435532 MADDQ8WXG6 1647 aa17.15■□□□□ 0.34
NEDD4-202ENST00000435532 SCRN1Q12765 414 aa17.15■□□□□ 0.34
NEDD4-202ENST00000435532 MYO1EQ12965 1108 aa17.15■□□□□ 0.34
NEDD4-202ENST00000435532 IMPACTQ9P2X3 320 aa17.15■□□□□ 0.34
NEDD4-202ENST00000435532 ASB14A6NK59 587 aa17.15■□□□□ 0.34
NEDD4-202ENST00000435532 CYP21A2P08686 494 aa17.14■□□□□ 0.34
NEDD4-202ENST00000435532 ANXA13P27216 316 aa17.14■□□□□ 0.34
NEDD4-202ENST00000435532 MFAP3P55082 362 aa17.14■□□□□ 0.34
NEDD4-202ENST00000435532 MORC3Q14149 939 aa17.14■□□□□ 0.34
NEDD4-202ENST00000435532 PPP1R2P3Q6NXS1 205 aa17.14■□□□□ 0.34
NEDD4-202ENST00000435532 SYMPKQ92797 1274 aaKnown RBP17.14■□□□□ 0.34
NEDD4-202ENST00000435532 STRBPQ96SI9 672 aaKnown RBP17.14■□□□□ 0.34
NEDD4-202ENST00000435532 IFT122Q9HBG6 1241 aa17.14■□□□□ 0.34
NEDD4-202ENST00000435532 RGS12O14924 1447 aa17.14■□□□□ 0.34
NEDD4-202ENST00000435532 NEDD9Q14511 834 aa17.14■□□□□ 0.33
NEDD4-202ENST00000435532 CFAP157Q5JU67 520 aa17.14■□□□□ 0.33
NEDD4-202ENST00000435532 RAB20Q9NX57 234 aa17.14■□□□□ 0.33
NEDD4-202ENST00000435532 PRDX5P30044 214 aa17.14■□□□□ 0.33
NEDD4-202ENST00000435532 SEPT2Q15019 361 aa17.14■□□□□ 0.33
NEDD4-202ENST00000435532 RNF187Q5TA31 235 aaPredicted RBP17.14■□□□□ 0.33
NEDD4-202ENST00000435532 RBM46Q8TBY0 533 aaKnown RBP17.14■□□□□ 0.33
NEDD4-202ENST00000435532 SLC12A6Q9UHW9 1150 aa17.14■□□□□ 0.33
NEDD4-202ENST00000435532 UTP11Q9Y3A2 253 aaKnown RBP17.14■□□□□ 0.33
NEDD4-202ENST00000435532 DIP2BQ9P265 1576 aa17.14■□□□□ 0.33
NEDD4-202ENST00000435532 IQSEC2Q5JU85 1478 aa17.14■□□□□ 0.33
NEDD4-202ENST00000435532 ZNF157P51786 506 aaPredicted RBP17.14■□□□□ 0.33
NEDD4-202ENST00000435532 TBC1D16Q8TBP0 767 aa17.14■□□□□ 0.33
NEDD4-202ENST00000435532 EZH2Q15910 746 aaKnown RBP17.14■□□□□ 0.33
NEDD4-202ENST00000435532 ZNF589Q86UQ0 364 aaPredicted RBP17.14■□□□□ 0.33
NEDD4-202ENST00000435532 FBXO18Q8NFZ0 1043 aa17.14■□□□□ 0.33
NEDD4-202ENST00000435532 PARK7Q99497 189 aaKnown RBP17.14■□□□□ 0.33
NEDD4-202ENST00000435532 KCNJ18B7U540 433 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 MYL7Q01449 175 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 SREBF2Q12772 1141 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 SNAPC2Q13487 334 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 KCNJ12Q14500 433 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 C7orf31Q8N865 590 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 CCDC127Q96BQ5 260 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 PLA2G12BQ9BX93 195 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 RAVER2Q9HCJ3 691 aaKnown RBP17.13■□□□□ 0.33
NEDD4-202ENST00000435532 TNPO2O14787 897 aaKnown RBP17.13■□□□□ 0.33
NEDD4-202ENST00000435532 SPP2Q13103 211 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 RRAGAQ7L523 313 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 BBS5Q8N3I7 341 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 AFAP1L2Q8N4X5 818 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 IFT81Q8WYA0 676 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 CCDC51Q96ER9 411 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 ARFGAP3Q9NP61 516 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 CYP2D7A0A087X1C5 515 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 GIPC1O14908 333 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 ZBTB5O15062 677 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 PFDN6O15212 129 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 PI4K2BQ8TCG2 481 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 MICAL1Q8TDZ2 1067 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 NT5C1BQ96P26 610 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 ACAD9Q9H845 621 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 PPP6R2O75170 966 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 IVLP07476 585 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 SARNPP82979 210 aaKnown RBP17.13■□□□□ 0.33
NEDD4-202ENST00000435532 MAP7D1Q3KQU3 841 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 CEP63Q96MT8 703 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 NAPGQ99747 312 aaPredicted RBP17.13■□□□□ 0.33
NEDD4-202ENST00000435532 IFNAR1P17181 557 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 PSMC2P35998 433 aaKnown RBP17.13■□□□□ 0.33
NEDD4-202ENST00000435532 SCYL2Q6P3W7 929 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 CCDC89Q8N998 374 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 ZSWIM5Q9P217 1185 aa17.13■□□□□ 0.33
NEDD4-202ENST00000435532 NOLC1Q14978 699 aaKnown RBP eCLIP17.12■□□□□ 0.33
NEDD4-202ENST00000435532 KRBA2Q6ZNG9 492 aa17.12■□□□□ 0.33
NEDD4-202ENST00000435532 RNF146Q9NTX7 359 aa17.12■□□□□ 0.33
NEDD4-202ENST00000435532 NEXMIFQ5QGS0 1516 aa17.12■□□□□ 0.33
NEDD4-202ENST00000435532 MYL1P05976 194 aa17.12■□□□□ 0.33
NEDD4-202ENST00000435532 SF3B3Q15393 1217 aaKnown RBP17.12■□□□□ 0.33
NEDD4-202ENST00000435532 RMDN3Q96TC7 470 aa17.12■□□□□ 0.33
NEDD4-202ENST00000435532 MTIF3Q9H2K0 278 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms