RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 PXMP2Q9NR77 195 aa21.19■□□□□ 0.98
HLA-F-220ENST00000434407 ALPK3Q96L96 1907 aa21.18■□□□□ 0.98
HLA-F-220ENST00000434407 MEIS2O14770 477 aa21.18■□□□□ 0.98
HLA-F-220ENST00000434407 PRPF3O43395 683 aaKnown RBP21.18■□□□□ 0.98
HLA-F-220ENST00000434407 COL6A1P12109 1028 aa21.18■□□□□ 0.98
HLA-F-220ENST00000434407 HOXA13P31271 388 aaPredicted RBP21.18■□□□□ 0.98
HLA-F-220ENST00000434407 CCT2P78371 535 aaKnown RBP21.18■□□□□ 0.98
HLA-F-220ENST00000434407 ANKRD1Q15327 319 aa21.18■□□□□ 0.98
HLA-F-220ENST00000434407 WWC2Q6AWC2 1192 aa21.18■□□□□ 0.98
HLA-F-220ENST00000434407 TEX2Q8IWB9 1127 aa21.18■□□□□ 0.98
HLA-F-220ENST00000434407 FBXO16Q8IX29 292 aaPredicted RBP21.18■□□□□ 0.98
HLA-F-220ENST00000434407 PAWRQ96IZ0 340 aaKnown RBP21.18■□□□□ 0.98
HLA-F-220ENST00000434407 LARP6Q9BRS8 491 aaKnown RBP21.18■□□□□ 0.98
HLA-F-220ENST00000434407 C22orf23Q9BZE7 217 aa21.18■□□□□ 0.98
HLA-F-220ENST00000434407 NCOA5Q9HCD5 579 aaKnown RBP21.18■□□□□ 0.98
HLA-F-220ENST00000434407 FRMPD4Q14CM0 1322 aa21.18■□□□□ 0.98
HLA-F-220ENST00000434407 AK2P54819 239 aa21.17■□□□□ 0.98
HLA-F-220ENST00000434407 NKX3-2P78367 333 aa21.17■□□□□ 0.98
HLA-F-220ENST00000434407 PDE4DQ08499 809 aa21.17■□□□□ 0.98
HLA-F-220ENST00000434407 LRRC41Q15345 812 aa21.17■□□□□ 0.98
HLA-F-220ENST00000434407 PKN1Q16512 942 aa21.17■□□□□ 0.98
HLA-F-220ENST00000434407 PFKFB3Q16875 520 aaPredicted RBP21.17■□□□□ 0.98
HLA-F-220ENST00000434407 IQSEC1Q6DN90 963 aa21.17■□□□□ 0.98
HLA-F-220ENST00000434407 TYW1BQ6NUM6 668 aa21.17■□□□□ 0.98
HLA-F-220ENST00000434407 NECAB2Q7Z6G3 386 aa21.17■□□□□ 0.98
HLA-F-220ENST00000434407 ARRDC4Q8NCT1 418 aa21.17■□□□□ 0.98
HLA-F-220ENST00000434407 GPKOWQ92917 476 aaPredicted RBP eCLIP21.17■□□□□ 0.98
HLA-F-220ENST00000434407 PDGFCQ9NRA1 345 aa21.17■□□□□ 0.98
HLA-F-220ENST00000434407 BARHL2Q9NY43 387 aa21.17■□□□□ 0.98
HLA-F-220ENST00000434407 RBM27Q9P2N5 1060 aaKnown RBP21.17■□□□□ 0.98
HLA-F-220ENST00000434407 TPCN1Q9ULQ1 816 aa21.17■□□□□ 0.98
HLA-F-220ENST00000434407 GNEQ9Y223 722 aaKnown RBP21.17■□□□□ 0.98
HLA-F-220ENST00000434407 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.16■□□□□ 0.98
HLA-F-220ENST00000434407 STXBP3O00186 592 aa21.16■□□□□ 0.98
HLA-F-220ENST00000434407 DNM1LO00429 736 aa21.16■□□□□ 0.98
HLA-F-220ENST00000434407 ADAMTS4O75173 837 aa21.16■□□□□ 0.98
HLA-F-220ENST00000434407 ADCYAP1R1P41586 468 aa21.16■□□□□ 0.98
HLA-F-220ENST00000434407 NEK4P51957 841 aa21.16■□□□□ 0.98
HLA-F-220ENST00000434407 ARHGEF16Q5VV41 709 aa21.16■□□□□ 0.98
HLA-F-220ENST00000434407 PPP1R18Q6NYC8 613 aa21.16■□□□□ 0.98
HLA-F-220ENST00000434407 EEPD1Q7L9B9 569 aa21.16■□□□□ 0.98
HLA-F-220ENST00000434407 HEATR3Q7Z4Q2 680 aa21.16■□□□□ 0.98
HLA-F-220ENST00000434407 LENG1Q96BZ8 264 aaPredicted RBP21.16■□□□□ 0.98
HLA-F-220ENST00000434407 PDCD2LQ9BRP1 358 aa21.16■□□□□ 0.98
HLA-F-220ENST00000434407 RNF26Q9BY78 433 aaPredicted RBP21.16■□□□□ 0.98
HLA-F-220ENST00000434407 UPF3AQ9H1J1 476 aaKnown RBP21.16■□□□□ 0.98
HLA-F-220ENST00000434407 PSTPIP2Q9H939 334 aa21.16■□□□□ 0.98
HLA-F-220ENST00000434407 XPNPEP3Q9NQH7 507 aa21.16■□□□□ 0.98
HLA-F-220ENST00000434407 PFKFB2O60825 505 aa21.15■□□□□ 0.98
HLA-F-220ENST00000434407 NR3C2P08235 984 aa21.15■□□□□ 0.98
HLA-F-220ENST00000434407 SCG2P13521 617 aa21.15■□□□□ 0.98
HLA-F-220ENST00000434407 EIF2AK2P19525 551 aaKnown RBP21.15■□□□□ 0.98
HLA-F-220ENST00000434407 TNFAIP2Q03169 654 aa21.15■□□□□ 0.98
HLA-F-220ENST00000434407 USP17L6PQ6QN14 398 aa21.15■□□□□ 0.98
HLA-F-220ENST00000434407 KLHDC9Q8NEP7 349 aa21.15■□□□□ 0.98
HLA-F-220ENST00000434407 SYNRGQ9UMZ2 1314 aa21.14■□□□□ 0.97
HLA-F-220ENST00000434407 PGK1P00558 417 aa21.14■□□□□ 0.97
HLA-F-220ENST00000434407 SMPD1P17405 629 aa21.14■□□□□ 0.97
HLA-F-220ENST00000434407 CST5P28325 142 aaPredicted RBP21.14■□□□□ 0.97
HLA-F-220ENST00000434407 GJA9P57773 515 aa21.14■□□□□ 0.97
HLA-F-220ENST00000434407 PGM5Q15124 567 aa21.14■□□□□ 0.97
HLA-F-220ENST00000434407 STXBP2Q15833 593 aa21.14■□□□□ 0.97
HLA-F-220ENST00000434407 DUSP28Q4G0W2 176 aa21.14■□□□□ 0.97
HLA-F-220ENST00000434407 GJC2Q5T442 439 aaPredicted RBP21.14■□□□□ 0.97
HLA-F-220ENST00000434407 CCSAPQ6IQ19 270 aaPredicted RBP21.14■□□□□ 0.97
HLA-F-220ENST00000434407 VSIG10LQ86VR7 867 aa21.14■□□□□ 0.97
HLA-F-220ENST00000434407 FCHSD1Q86WN1 690 aa21.14■□□□□ 0.97
HLA-F-220ENST00000434407 CUL5Q93034 780 aa21.14■□□□□ 0.97
HLA-F-220ENST00000434407 PHKBQ93100 1093 aa21.14■□□□□ 0.97
HLA-F-220ENST00000434407 C11orf49Q9H6J7 331 aa21.14■□□□□ 0.97
HLA-F-220ENST00000434407 Q9Y3F1 56 aa21.14■□□□□ 0.97
HLA-F-220ENST00000434407 CTAGE5O15320 804 aa21.13■□□□□ 0.97
HLA-F-220ENST00000434407 EIF3JO75822 258 aaKnown RBP21.13■□□□□ 0.97
HLA-F-220ENST00000434407 NAPAP54920 295 aa21.13■□□□□ 0.97
HLA-F-220ENST00000434407 SCRN1Q12765 414 aa21.13■□□□□ 0.97
HLA-F-220ENST00000434407 RNF180Q86T96 592 aa21.13■□□□□ 0.97
HLA-F-220ENST00000434407 IL31RAQ8NI17 732 aa21.13■□□□□ 0.97
HLA-F-220ENST00000434407 WDR11Q9BZH6 1224 aa21.13■□□□□ 0.97
HLA-F-220ENST00000434407 RIC8AQ9NPQ8 531 aa21.13■□□□□ 0.97
HLA-F-220ENST00000434407 MYH7BA7E2Y1 1941 aa21.12■□□□□ 0.97
HLA-F-220ENST00000434407 STK3Q13188 491 aa21.12■□□□□ 0.97
HLA-F-220ENST00000434407 TMEM63BQ5T3F8 832 aa21.12■□□□□ 0.97
HLA-F-220ENST00000434407 CCDC62Q6P9F0 684 aa21.12■□□□□ 0.97
HLA-F-220ENST00000434407 SMARCC2Q8TAQ2 1214 aa21.12■□□□□ 0.97
HLA-F-220ENST00000434407 SCFD2Q8WU76 684 aa21.12■□□□□ 0.97
HLA-F-220ENST00000434407 TSEN34Q9BSV6 310 aaKnown RBP21.12■□□□□ 0.97
HLA-F-220ENST00000434407 SLC26A6Q9BXS9 759 aa21.12■□□□□ 0.97
HLA-F-220ENST00000434407 SLKQ9H2G2 1235 aaPredicted RBP21.12■□□□□ 0.97
HLA-F-220ENST00000434407 ESYT2A0FGR8 921 aa21.11■□□□□ 0.97
HLA-F-220ENST00000434407 KBTBD13C9JR72 458 aa21.11■□□□□ 0.97
HLA-F-220ENST00000434407 CPLX1O14810 134 aa21.11■□□□□ 0.97
HLA-F-220ENST00000434407 RGS20O76081 388 aa21.11■□□□□ 0.97
HLA-F-220ENST00000434407 AKAP17AQ02040 695 aaKnown RBP21.11■□□□□ 0.97
HLA-F-220ENST00000434407 ME3Q16798 604 aa21.11■□□□□ 0.97
HLA-F-220ENST00000434407 HTATIP2Q9BUP3 242 aa21.11■□□□□ 0.97
HLA-F-220ENST00000434407 GLT8D2Q9H1C3 349 aa21.11■□□□□ 0.97
HLA-F-220ENST00000434407 PHF24Q9UPV7 400 aa21.11■□□□□ 0.97
HLA-F-220ENST00000434407 MYADML2A6NDP7 307 aa21.1■□□□□ 0.97
HLA-F-220ENST00000434407 SMCO2A6NFE2 343 aa21.1■□□□□ 0.97
HLA-F-220ENST00000434407 NKRFO15226 690 aaKnown RBP eCLIP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms