RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 FAM177BA6PVY3 158 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 USP17L12C9JPN9 530 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 USP17L21D6R901 530 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 BAG3O95817 575 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 ITGB2P05107 769 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 MYL1P05976 194 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 SLFN14P0C7P3 912 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 TNNT1P13805 278 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 PTPN14Q15678 1187 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 NPY5RQ15761 445 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 PFKFB3Q16875 520 aaPredicted RBP8.45□□□□□ -1.06
COL17A1-204ENST00000433822 CRY2Q49AN0 593 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 SH3D19Q5HYK7 790 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 C12orf60Q5U649 245 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 AMOTL1Q8IY63 956 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 CCAR2Q8N163 923 aaKnown RBP8.45□□□□□ -1.06
COL17A1-204ENST00000433822 GALNT6Q8NCL4 622 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 EPS8L1Q8TE68 723 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 SMARCE1Q969G3 411 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 ACDQ96AP0 544 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 IFNKQ9P0W0 207 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 SUGT1Q9Y2Z0 365 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 XDHP47989 1333 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 UBR3Q6ZT12 1888 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 MINDY4BA8MYZ0 360 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 LAD1O00515 517 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 PROCP04070 461 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 SCG2P13521 617 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 ATP2B4P23634 1241 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 POLD1P28340 1107 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 NOVP48745 357 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 PLCD1P51178 756 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 UBASH3AP57075 661 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 TBX2Q13207 712 aaPredicted RBP8.44□□□□□ -1.06
COL17A1-204ENST00000433822 TPD52L1Q16890 204 aaPredicted RBP8.44□□□□□ -1.06
COL17A1-204ENST00000433822 LONRF3Q496Y0 759 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 CEP135Q66GS9 1140 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 ZNF804AQ7Z570 1209 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 FOXP4Q8IVH2 680 aaPredicted RBP8.44□□□□□ -1.06
COL17A1-204ENST00000433822 VSTM4Q8IW00 320 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 PDCL2Q8N4E4 241 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 PROCA1Q8NCQ7 364 aaPredicted RBP8.44□□□□□ -1.06
COL17A1-204ENST00000433822 CCDC148Q8NFR7 591 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 KIF18AQ8NI77 898 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 NUP133Q8WUM0 1156 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 GTPBP3Q969Y2 492 aaKnown RBP8.44□□□□□ -1.06
COL17A1-204ENST00000433822 CLIC6Q96NY7 704 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 INCENPQ9NQS7 918 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 PODXL2Q9NZ53 605 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 CCNL1Q9UK58 526 aaPredicted RBP8.44□□□□□ -1.06
COL17A1-204ENST00000433822 MAN1B1Q9UKM7 699 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 KCNJ14Q9UNX9 436 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 PCDHB6Q9Y5E3 794 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 FOCADQ5VW36 1801 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 PLIN4Q96Q06 1357 aa8.44□□□□□ -1.06
COL17A1-204ENST00000433822 LTBP1Q14766 1721 aa8.43□□□□□ -1.06
COL17A1-204ENST00000433822 KLRG2A4D1S0 409 aaPredicted RBP8.43□□□□□ -1.06
COL17A1-204ENST00000433822 hCG_1984214I3L0E3 225 aa8.43□□□□□ -1.06
COL17A1-204ENST00000433822 MEN1O00255 615 aa8.43□□□□□ -1.06
COL17A1-204ENST00000433822 POLR2DO15514 142 aaKnown RBP8.43□□□□□ -1.06
COL17A1-204ENST00000433822 ARHGAP6O43182 974 aa8.43□□□□□ -1.06
COL17A1-204ENST00000433822 LDHBP07195 334 aaKnown RBP8.43□□□□□ -1.06
COL17A1-204ENST00000433822 HOXA10P31260 410 aaPredicted RBP8.43□□□□□ -1.06
COL17A1-204ENST00000433822 LONP1P36776 959 aaKnown RBP8.43□□□□□ -1.06
COL17A1-204ENST00000433822 PRPHP41219 470 aa8.43□□□□□ -1.06
COL17A1-204ENST00000433822 DYNLL1P63167 89 aaKnown RBP8.43□□□□□ -1.06
COL17A1-204ENST00000433822 PNOCQ13519 176 aa8.43□□□□□ -1.06
COL17A1-204ENST00000433822 GRM4Q14833 912 aa8.43□□□□□ -1.06
COL17A1-204ENST00000433822 TTC38Q5R3I4 469 aa8.43□□□□□ -1.06
COL17A1-204ENST00000433822 RCSD1Q6JBY9 416 aa8.43□□□□□ -1.06
COL17A1-204ENST00000433822 ARMCX5Q6P1M9 558 aa8.43□□□□□ -1.06
COL17A1-204ENST00000433822 TMC6Q7Z403 805 aa8.43□□□□□ -1.06
COL17A1-204ENST00000433822 FILIP1Q7Z7B0 1213 aa8.43□□□□□ -1.06
COL17A1-204ENST00000433822 DZIP1Q86YF9 867 aaKnown RBP8.43□□□□□ -1.06
COL17A1-204ENST00000433822 C17orf53Q8N3J3 647 aaPredicted RBP8.43□□□□□ -1.06
COL17A1-204ENST00000433822 ZNF713Q8N859 430 aaPredicted RBP8.43□□□□□ -1.06
COL17A1-204ENST00000433822 TBC1D22AQ8WUA7 517 aa8.43□□□□□ -1.06
COL17A1-204ENST00000433822 CTAGE1Q96RT6 745 aa8.43□□□□□ -1.06
COL17A1-204ENST00000433822 ZKSCAN3Q9BRR0 538 aa8.43□□□□□ -1.06
COL17A1-204ENST00000433822 SRRTQ9BXP5 876 aaKnown RBP8.43□□□□□ -1.06
COL17A1-204ENST00000433822 CUEDC2Q9H467 287 aa8.43□□□□□ -1.06
COL17A1-204ENST00000433822 L2HGDHQ9H9P8 463 aa8.43□□□□□ -1.06
COL17A1-204ENST00000433822 MAGEF1Q9HAY2 307 aa8.43□□□□□ -1.06
COL17A1-204ENST00000433822 CABP5Q9NP86 173 aa8.43□□□□□ -1.06
COL17A1-204ENST00000433822 MYO3BQ8WXR4 1341 aa8.43□□□□□ -1.06
COL17A1-204ENST00000433822 PDE4DIPQ5VU43 2346 aa8.43□□□□□ -1.06
COL17A1-204ENST00000433822 CDK5RAP2Q96SN8 1893 aa8.43□□□□□ -1.06
COL17A1-204ENST00000433822 TSPY2A6NKD2 308 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 BIN1O00499 593 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 STX10O60499 249 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 BBOX1O75936 387 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 PLEKHA8P1O95397 391 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 IL1R1P14778 569 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 MX2P20592 715 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 BMP6P22004 513 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 LMOD1P29536 600 aaPredicted RBP8.42□□□□□ -1.06
COL17A1-204ENST00000433822 PRDX5P30044 214 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 PPP1R2P41236 205 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 KCNQ4P56696 695 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 SPAG1Q07617 926 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms