RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 TXNP10599 105 aaKnown RBP25.45■■□□□ 1.66
RPUSD3-206ENST00000433535 PTH1RQ03431 593 aa25.45■■□□□ 1.66
RPUSD3-206ENST00000433535 SEC23AQ15436 765 aa25.45■■□□□ 1.66
RPUSD3-206ENST00000433535 FBXO11Q86XK2 927 aa25.45■■□□□ 1.66
RPUSD3-206ENST00000433535 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.45■■□□□ 1.66
RPUSD3-206ENST00000433535 MAFAQ8NHW3 353 aaPredicted RBP25.45■■□□□ 1.66
RPUSD3-206ENST00000433535 TAAR1Q96RJ0 339 aa25.45■■□□□ 1.66
RPUSD3-206ENST00000433535 CDH23Q9H251 3354 aa25.45■■□□□ 1.66
RPUSD3-206ENST00000433535 B4DLN1 442 aa25.44■■□□□ 1.66
RPUSD3-206ENST00000433535 FOSL2P15408 326 aa25.44■■□□□ 1.66
RPUSD3-206ENST00000433535 CHMLP26374 656 aa25.44■■□□□ 1.66
RPUSD3-206ENST00000433535 PBX2P40425 430 aa25.44■■□□□ 1.66
RPUSD3-206ENST00000433535 MRPL12P52815 198 aaKnown RBP25.44■■□□□ 1.66
RPUSD3-206ENST00000433535 MTG1Q9BT17 334 aaPredicted RBP25.44■■□□□ 1.66
RPUSD3-206ENST00000433535 GPHNQ9NQX3 736 aaPredicted RBP25.44■■□□□ 1.66
RPUSD3-206ENST00000433535 TTLL4Q14679 1199 aa25.43■■□□□ 1.66
RPUSD3-206ENST00000433535 GRIN2CQ14957 1233 aa25.43■■□□□ 1.66
RPUSD3-206ENST00000433535 FAM47CQ5HY64 1035 aa25.43■■□□□ 1.66
RPUSD3-206ENST00000433535 MCF2L2Q86YR7 1114 aa25.43■■□□□ 1.66
RPUSD3-206ENST00000433535 TIFAQ96CG3 184 aa25.43■■□□□ 1.66
RPUSD3-206ENST00000433535 PBX4Q9BYU1 374 aa25.43■■□□□ 1.66
RPUSD3-206ENST00000433535 CXXC1Q9P0U4 656 aaPredicted RBP25.43■■□□□ 1.66
RPUSD3-206ENST00000433535 MRPL11Q9Y3B7 192 aaKnown RBP25.43■■□□□ 1.66
RPUSD3-206ENST00000433535 TAF6LQ9Y6J9 622 aa25.43■■□□□ 1.66
RPUSD3-206ENST00000433535 KIAA1217Q5T5P2 1943 aa25.42■■□□□ 1.66
RPUSD3-206ENST00000433535 CYP21A2P08686 494 aa25.42■■□□□ 1.66
RPUSD3-206ENST00000433535 CYP2C9P11712 490 aa25.42■■□□□ 1.66
RPUSD3-206ENST00000433535 BRDTQ58F21 947 aaPredicted RBP25.42■■□□□ 1.66
RPUSD3-206ENST00000433535 SEPT14Q6ZU15 432 aa25.42■■□□□ 1.66
RPUSD3-206ENST00000433535 NSUN6Q8TEA1 469 aaKnown RBP25.42■■□□□ 1.66
RPUSD3-206ENST00000433535 RUFY2Q8WXA3 655 aa25.42■■□□□ 1.66
RPUSD3-206ENST00000433535 HERVK_113Q902F9 699 aa25.42■■□□□ 1.66
RPUSD3-206ENST00000433535 SCLYQ96I15 445 aa25.42■■□□□ 1.66
RPUSD3-206ENST00000433535 RMDN3Q96TC7 470 aa25.42■■□□□ 1.66
RPUSD3-206ENST00000433535 ZNF576Q9H609 170 aa25.42■■□□□ 1.66
RPUSD3-206ENST00000433535 GBF1Q92538 1859 aa25.42■■□□□ 1.66
RPUSD3-206ENST00000433535 A6NJR5 290 aa25.41■■□□□ 1.66
RPUSD3-206ENST00000433535 PPP1R11O60927 126 aaPredicted RBP25.41■■□□□ 1.66
RPUSD3-206ENST00000433535 TRDNQ13061 729 aa25.41■■□□□ 1.66
RPUSD3-206ENST00000433535 NBPF20Q3BBV1 942 aa25.41■■□□□ 1.66
RPUSD3-206ENST00000433535 OTOP2Q7RTS6 562 aa25.41■■□□□ 1.66
RPUSD3-206ENST00000433535 MAD2L2Q9UI95 211 aa25.41■■□□□ 1.66
RPUSD3-206ENST00000433535 KLRF2D3W0D1 207 aa25.4■■□□□ 1.66
RPUSD3-206ENST00000433535 OPLAHO14841 1288 aa25.4■■□□□ 1.66
RPUSD3-206ENST00000433535 CFBP00751 764 aa25.4■■□□□ 1.66
RPUSD3-206ENST00000433535 FGBP02675 491 aa25.4■■□□□ 1.66
RPUSD3-206ENST00000433535 EIF2AK2P19525 551 aaKnown RBP25.4■■□□□ 1.66
RPUSD3-206ENST00000433535 LY6KQ17RY6 165 aa25.4■■□□□ 1.66
RPUSD3-206ENST00000433535 CCDC62Q6P9F0 684 aa25.4■■□□□ 1.66
RPUSD3-206ENST00000433535 AMNQ9BXJ7 453 aa25.4■■□□□ 1.66
RPUSD3-206ENST00000433535 MAF1Q9H063 256 aa25.4■■□□□ 1.66
RPUSD3-206ENST00000433535 SENP2Q9HC62 589 aa25.4■■□□□ 1.66
RPUSD3-206ENST00000433535 U3KPZ7 1027 aaPredicted RBP25.4■■□□□ 1.66
RPUSD3-206ENST00000433535 CHMP4BP1P59074 171 aa25.39■■□□□ 1.66
RPUSD3-206ENST00000433535 SLC35G1Q2M3R5 365 aa25.39■■□□□ 1.66
RPUSD3-206ENST00000433535 ARHGEF16Q5VV41 709 aa25.39■■□□□ 1.66
RPUSD3-206ENST00000433535 AFG1LQ8WV93 481 aa25.39■■□□□ 1.66
RPUSD3-206ENST00000433535 SCN5AQ14524 2016 aa25.39■■□□□ 1.65
RPUSD3-206ENST00000433535 TANC1Q9C0D5 1861 aa25.38■■□□□ 1.65
RPUSD3-206ENST00000433535 PALM3A6NDB9 673 aaPredicted RBP25.38■■□□□ 1.65
RPUSD3-206ENST00000433535 SUPT20HL2P0C7V6 817 aa25.38■■□□□ 1.65
RPUSD3-206ENST00000433535 ARHGAP1Q07960 439 aa25.38■■□□□ 1.65
RPUSD3-206ENST00000433535 STXBP2Q15833 593 aa25.38■■□□□ 1.65
RPUSD3-206ENST00000433535 STOX1Q6ZVD7 989 aa25.38■■□□□ 1.65
RPUSD3-206ENST00000433535 CHST3Q7LGC8 479 aa25.38■■□□□ 1.65
RPUSD3-206ENST00000433535 HOMER1Q86YM7 354 aa25.38■■□□□ 1.65
RPUSD3-206ENST00000433535 VWCEQ96DN2 955 aa25.38■■□□□ 1.65
RPUSD3-206ENST00000433535 MTMR8Q96EF0 704 aa25.38■■□□□ 1.65
RPUSD3-206ENST00000433535 MTIF3Q9H2K0 278 aaKnown RBP25.38■■□□□ 1.65
RPUSD3-206ENST00000433535 IFIT3O14879 490 aaKnown RBP25.37■■□□□ 1.65
RPUSD3-206ENST00000433535 ZBTB5O15062 677 aa25.37■■□□□ 1.65
RPUSD3-206ENST00000433535 SGSM2O43147 1006 aa25.37■■□□□ 1.65
RPUSD3-206ENST00000433535 KPNA6O60684 536 aa25.37■■□□□ 1.65
RPUSD3-206ENST00000433535 MMP3P08254 477 aa25.37■■□□□ 1.65
RPUSD3-206ENST00000433535 HSD17B4P51659 736 aa25.37■■□□□ 1.65
RPUSD3-206ENST00000433535 GRM4Q14833 912 aa25.37■■□□□ 1.65
RPUSD3-206ENST00000433535 NFRKBQ6P4R8 1299 aa25.37■■□□□ 1.65
RPUSD3-206ENST00000433535 RALYLQ86SE5 291 aaKnown RBP25.37■■□□□ 1.65
RPUSD3-206ENST00000433535 IWS1Q96ST2 819 aa25.37■■□□□ 1.65
RPUSD3-206ENST00000433535 PXMP2Q9NR77 195 aa25.37■■□□□ 1.65
RPUSD3-206ENST00000433535 CUL9Q8IWT3 2517 aa25.36■■□□□ 1.65
RPUSD3-206ENST00000433535 E7EWF7 191 aa25.36■■□□□ 1.65
RPUSD3-206ENST00000433535 GH1P01241 217 aa25.36■■□□□ 1.65
RPUSD3-206ENST00000433535 PCDHA1Q9Y5I3 950 aa25.36■■□□□ 1.65
RPUSD3-206ENST00000433535 UNC80Q8N2C7 3258 aa25.36■■□□□ 1.65
RPUSD3-206ENST00000433535 EYSQ5T1H1 3165 aa25.35■■□□□ 1.65
RPUSD3-206ENST00000433535 NR3C2P08235 984 aa25.35■■□□□ 1.65
RPUSD3-206ENST00000433535 HOXA13P31271 388 aaPredicted RBP25.35■■□□□ 1.65
RPUSD3-206ENST00000433535 DEFB128Q7Z7B8 93 aa25.35■■□□□ 1.65
RPUSD3-206ENST00000433535 RPUSD2Q8IZ73 545 aaKnown RBP25.35■■□□□ 1.65
RPUSD3-206ENST00000433535 NCOA7Q8NI08 942 aa25.35■■□□□ 1.65
RPUSD3-206ENST00000433535 PIGSQ96S52 555 aa25.35■■□□□ 1.65
RPUSD3-206ENST00000433535 BAZ2BQ9UIF8 2168 aaKnown RBP25.35■■□□□ 1.65
RPUSD3-206ENST00000433535 ERICH2A1L162 156 aa25.34■■□□□ 1.65
RPUSD3-206ENST00000433535 GHRHRQ02643 423 aa25.34■■□□□ 1.65
RPUSD3-206ENST00000433535 WTAPQ15007 396 aa25.34■■□□□ 1.65
RPUSD3-206ENST00000433535 RAB30Q15771 203 aa25.34■■□□□ 1.65
RPUSD3-206ENST00000433535 COL25A1Q9BXS0 654 aaPredicted RBP25.34■■□□□ 1.65
RPUSD3-206ENST00000433535 NKX2-4Q9H2Z4 354 aa25.34■■□□□ 1.65
RPUSD3-206ENST00000433535 MSRAQ9UJ68 235 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms