RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 ADAMTS8Q9UP79 889 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 LZTS1Q9Y250 596 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 GJA3Q9Y6H8 435 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 NPHP3Q7Z494 1330 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 CPSF1Q10570 1443 aaKnown RBP11.96□□□□□ -0.49
CCDC171-202ENST00000432954 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.96□□□□□ -0.5
CCDC171-202ENST00000432954 SERPINB7O75635 380 aa11.96□□□□□ -0.5
CCDC171-202ENST00000432954 DGKIO75912 1065 aa11.96□□□□□ -0.5
CCDC171-202ENST00000432954 MYCP01106 439 aaPredicted RBP11.96□□□□□ -0.5
CCDC171-202ENST00000432954 CYP2C9P11712 490 aa11.96□□□□□ -0.5
CCDC171-202ENST00000432954 ATP6V1C1P21283 382 aa11.96□□□□□ -0.5
CCDC171-202ENST00000432954 PRKACBP22694 351 aa11.96□□□□□ -0.5
CCDC171-202ENST00000432954 TKTP29401 623 aaKnown RBP11.96□□□□□ -0.5
CCDC171-202ENST00000432954 MRPS25P82663 173 aaKnown RBP11.96□□□□□ -0.5
CCDC171-202ENST00000432954 PAK2Q13177 524 aa11.96□□□□□ -0.5
CCDC171-202ENST00000432954 PTGISQ16647 500 aa11.96□□□□□ -0.5
CCDC171-202ENST00000432954 IFI16Q16666 785 aaKnown RBP11.96□□□□□ -0.5
CCDC171-202ENST00000432954 C15orf59Q2T9L4 293 aaPredicted RBP11.96□□□□□ -0.5
CCDC171-202ENST00000432954 ANKDD1AQ495B1 522 aa11.96□□□□□ -0.5
CCDC171-202ENST00000432954 ZNF746Q6NUN9 644 aaPredicted RBP11.96□□□□□ -0.5
CCDC171-202ENST00000432954 CRACR2BQ8N4Y2 399 aaPredicted RBP11.96□□□□□ -0.5
CCDC171-202ENST00000432954 GIMAP5Q96F15 307 aa11.96□□□□□ -0.5
CCDC171-202ENST00000432954 ZNF512BQ96KM6 892 aaPredicted RBP11.96□□□□□ -0.5
CCDC171-202ENST00000432954 MBD5Q9P267 1494 aa11.96□□□□□ -0.5
CCDC171-202ENST00000432954 STAP2Q9UGK3 403 aa11.96□□□□□ -0.5
CCDC171-202ENST00000432954 VWA3AA6NCI4 1184 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 UPP2O95045 317 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 OXSR1O95747 527 aaPredicted RBP11.95□□□□□ -0.5
CCDC171-202ENST00000432954 LSP1P33241 339 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 MAN1A1P33908 653 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 TSPAN7P41732 249 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 MXI1P50539 228 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 ADRM1Q16186 407 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 HIBCHQ6NVY1 386 aaPredicted RBP11.95□□□□□ -0.5
CCDC171-202ENST00000432954 ARMCX5Q6P1M9 558 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 NLRP14Q86W24 1093 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 ITPRIPQ8IWB1 547 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 SPARTQ8N0X7 666 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 RETREG2Q8NC44 543 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 NOA1Q8NC60 698 aaKnown RBP11.95□□□□□ -0.5
CCDC171-202ENST00000432954 EHBP1Q8NDI1 1231 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 MYCBPAPQ8TBZ2 947 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 DHX58Q96C10 678 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 CCDC28BQ9BUN5 200 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 FTOQ9C0B1 505 aaKnown RBP eCLIP11.95□□□□□ -0.5
CCDC171-202ENST00000432954 NOX1Q9Y5S8 564 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 E7ENQ6 273 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 PPIP5K2O43314 1243 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 GNA14O95837 355 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 PTPN2P17706 415 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 CD53P19397 219 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 CETN2P41208 172 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 POLD2P49005 469 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 MCL1Q07820 350 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 MTMR3Q13615 1198 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 CYP26C1Q6V0L0 522 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 GALNT6Q8NCL4 622 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 COG3Q96JB2 828 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 CCT8L2Q96SF2 557 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 GLT8D2Q9H1C3 349 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 KCNMB3Q9NPA1 279 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 ARHGEF38Q9NXL2 777 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 SEC63Q9UGP8 760 aaKnown RBP11.95□□□□□ -0.5
CCDC171-202ENST00000432954 SAP30BPQ9UHR5 308 aaKnown RBP11.95□□□□□ -0.5
CCDC171-202ENST00000432954 GIT1Q9Y2X7 761 aa11.95□□□□□ -0.5
CCDC171-202ENST00000432954 BTBD19C9JJ37 291 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 HAT1O14929 419 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 KMOO15229 486 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 STAMBPO95630 424 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 PYGMP11217 842 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 GLULP15104 373 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 ATP2A2P16615 1042 aaKnown RBP11.94□□□□□ -0.5
CCDC171-202ENST00000432954 GJA9P57773 515 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 UBXN2AP68543 259 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 TBL3Q12788 808 aaKnown RBP11.94□□□□□ -0.5
CCDC171-202ENST00000432954 PRKG1Q13976 671 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 SIGIRRQ6IA17 410 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 CCDC146Q8IYE0 955 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 LPIN2Q92539 896 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 HAUS1Q96CS2 278 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 EGLN2Q96KS0 407 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 RPS6KC1Q96S38 1066 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 CCDC87Q9NVE4 849 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 FAIMQ9NVQ4 179 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 C2orf81A6NN90 581 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 PRPF3O43395 683 aaKnown RBP11.94□□□□□ -0.5
CCDC171-202ENST00000432954 LGR5O75473 907 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 CPA3P15088 417 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 WEE1P30291 646 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 RFC5P40937 340 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 BEND5Q7L4P6 421 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 VPS36Q86VN1 386 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 MAP7D3Q8IWC1 876 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 SPICE1Q8N0Z3 855 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 SIX5Q8N196 739 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 VPS50Q96JG6 964 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 DDX19AQ9NUU7 478 aaKnown RBP11.94□□□□□ -0.5
CCDC171-202ENST00000432954 ATPIF1Q9UII2 106 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 CDC23Q9UJX2 597 aa11.94□□□□□ -0.5
CCDC171-202ENST00000432954 WDR7Q9Y4E6 1490 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms