RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 CRYGNQ8WXF5 182 aa21.98■■□□□ 1.11
VRK2-205ENST00000432057 KIFC2Q96AC6 838 aa21.98■■□□□ 1.11
VRK2-205ENST00000432057 UIMC1Q96RL1 719 aa21.98■■□□□ 1.11
VRK2-205ENST00000432057 NUDT12Q9BQG2 462 aa21.98■■□□□ 1.11
VRK2-205ENST00000432057 TRIM9Q9C026 710 aa21.98■■□□□ 1.11
VRK2-205ENST00000432057 RWDD2AQ9UIY3 292 aa21.98■■□□□ 1.11
VRK2-205ENST00000432057 R3HCC1Q9Y3T6 440 aaKnown RBP21.98■■□□□ 1.11
VRK2-205ENST00000432057 ZNF541Q9H0D2 1346 aa21.98■■□□□ 1.11
VRK2-205ENST00000432057 PHF20L1A8MW92 1017 aa21.98■■□□□ 1.11
VRK2-205ENST00000432057 ARHGAP4P98171 946 aa21.98■■□□□ 1.11
VRK2-205ENST00000432057 CCDC174Q6PII3 467 aa21.98■■□□□ 1.11
VRK2-205ENST00000432057 CDK5RAP3Q96JB5 506 aa21.98■■□□□ 1.11
VRK2-205ENST00000432057 C7orf25Q9BPX7 421 aa21.98■■□□□ 1.11
VRK2-205ENST00000432057 BLOC1S4Q9NUP1 217 aa21.98■■□□□ 1.11
VRK2-205ENST00000432057 RBBP6Q7Z6E9 1792 aaKnown RBP21.98■■□□□ 1.11
VRK2-205ENST00000432057 SPDYE3A6NKU9 549 aa21.97■■□□□ 1.11
VRK2-205ENST00000432057 RHOBTB3O94955 611 aa21.97■■□□□ 1.11
VRK2-205ENST00000432057 HOXA13P31271 388 aaPredicted RBP21.97■■□□□ 1.11
VRK2-205ENST00000432057 TPD52L1Q16890 204 aaPredicted RBP21.97■■□□□ 1.11
VRK2-205ENST00000432057 KRT79Q5XKE5 535 aa21.97■■□□□ 1.11
VRK2-205ENST00000432057 MCTP2Q6DN12 878 aa21.97■■□□□ 1.11
VRK2-205ENST00000432057 MBOAT7Q96N66 472 aa21.97■■□□□ 1.11
VRK2-205ENST00000432057 RANBP17Q9H2T7 1088 aaKnown RBP21.97■■□□□ 1.11
VRK2-205ENST00000432057 STK17AQ9UEE5 414 aa21.97■■□□□ 1.11
VRK2-205ENST00000432057 CNOT7Q9UIV1 285 aaKnown RBP21.97■■□□□ 1.11
VRK2-205ENST00000432057 PARP14Q460N5 1801 aa21.97■■□□□ 1.11
VRK2-205ENST00000432057 CYP3A7-CYP3A51PA0A087WV96 503 aa21.96■■□□□ 1.11
VRK2-205ENST00000432057 SFPQP23246 707 aaKnown RBP eCLIP21.96■■□□□ 1.11
VRK2-205ENST00000432057 CYP3A7P24462 503 aa21.96■■□□□ 1.11
VRK2-205ENST00000432057 ASIC1P78348 528 aa21.96■■□□□ 1.11
VRK2-205ENST00000432057 SAMD1Q6SPF0 538 aaPredicted RBP21.96■■□□□ 1.11
VRK2-205ENST00000432057 APTXQ7Z2E3 356 aaKnown RBP21.96■■□□□ 1.11
VRK2-205ENST00000432057 CHURC1Q8WUH1 139 aa21.96■■□□□ 1.11
VRK2-205ENST00000432057 ZNF341Q9BYN7 854 aa21.96■■□□□ 1.11
VRK2-205ENST00000432057 KCNMB3Q9NPA1 279 aa21.96■■□□□ 1.11
VRK2-205ENST00000432057 HACL1Q9UJ83 578 aa21.96■■□□□ 1.11
VRK2-205ENST00000432057 SBF1O95248 1867 aa21.96■■□□□ 1.11
VRK2-205ENST00000432057 MCM6Q14566 821 aa21.96■■□□□ 1.11
VRK2-205ENST00000432057 TMEM119Q4V9L6 283 aa21.96■■□□□ 1.11
VRK2-205ENST00000432057 MOXD1Q6UVY6 613 aa21.96■■□□□ 1.11
VRK2-205ENST00000432057 ADSSL1Q8N142 457 aa21.96■■□□□ 1.11
VRK2-205ENST00000432057 FEZ1Q99689 392 aa21.96■■□□□ 1.11
VRK2-205ENST00000432057 FBXO28Q9NVF7 368 aa21.96■■□□□ 1.11
VRK2-205ENST00000432057 PCDHA12Q9UN75 941 aa21.96■■□□□ 1.11
VRK2-205ENST00000432057 A0A1B0GTH6 734 aa21.95■■□□□ 1.1
VRK2-205ENST00000432057 FOSP01100 380 aaPredicted RBP21.95■■□□□ 1.1
VRK2-205ENST00000432057 SREBF1P36956 1147 aa21.95■■□□□ 1.1
VRK2-205ENST00000432057 KIF4BQ2VIQ3 1234 aa21.95■■□□□ 1.1
VRK2-205ENST00000432057 SV2BQ7L1I2 683 aa21.95■■□□□ 1.1
VRK2-205ENST00000432057 GIMAP8Q8ND71 665 aaPredicted RBP21.95■■□□□ 1.1
VRK2-205ENST00000432057 LARP4BQ92615 738 aaKnown RBP21.95■■□□□ 1.1
VRK2-205ENST00000432057 AMPD3Q01432 767 aa21.94■■□□□ 1.1
VRK2-205ENST00000432057 ECM1Q16610 540 aa21.94■■□□□ 1.1
VRK2-205ENST00000432057 KCNK18Q7Z418 384 aa21.94■■□□□ 1.1
VRK2-205ENST00000432057 FAM160B2Q86V87 743 aa21.94■■□□□ 1.1
VRK2-205ENST00000432057 RAD54LQ92698 747 aa21.94■■□□□ 1.1
VRK2-205ENST00000432057 SPON1Q9HCB6 807 aa21.94■■□□□ 1.1
VRK2-205ENST00000432057 EXOC1Q9NV70 894 aa21.94■■□□□ 1.1
VRK2-205ENST00000432057 TRIM49BA6NDI0 452 aa21.94■■□□□ 1.1
VRK2-205ENST00000432057 PLA2G6O60733 806 aa21.94■■□□□ 1.1
VRK2-205ENST00000432057 PDE4DQ08499 809 aa21.94■■□□□ 1.1
VRK2-205ENST00000432057 GOLGA8FQ08AF8 430 aa21.94■■□□□ 1.1
VRK2-205ENST00000432057 GOLGA8DPQ0D2H9 430 aa21.94■■□□□ 1.1
VRK2-205ENST00000432057 SEMA3FQ13275 785 aa21.94■■□□□ 1.1
VRK2-205ENST00000432057 NR1I3Q14994 352 aa21.94■■□□□ 1.1
VRK2-205ENST00000432057 PRR16Q569H4 304 aa21.94■■□□□ 1.1
VRK2-205ENST00000432057 CCDC47Q96A33 483 aaKnown RBP21.94■■□□□ 1.1
VRK2-205ENST00000432057 FEM1BQ9UK73 627 aa21.94■■□□□ 1.1
VRK2-205ENST00000432057 MYMKA6NI61 221 aa21.93■■□□□ 1.1
VRK2-205ENST00000432057 PIK3CDO00329 1044 aa21.93■■□□□ 1.1
VRK2-205ENST00000432057 TRAF1Q13077 416 aa21.92■■□□□ 1.1
VRK2-205ENST00000432057 TBX2Q13207 712 aaPredicted RBP21.92■■□□□ 1.1
VRK2-205ENST00000432057 FCHSD1Q86WN1 690 aa21.92■■□□□ 1.1
VRK2-205ENST00000432057 ETNPPLQ8TBG4 499 aa21.92■■□□□ 1.1
VRK2-205ENST00000432057 TBC1D5Q92609 795 aa21.92■■□□□ 1.1
VRK2-205ENST00000432057 LENG9Q96B70 501 aa21.92■■□□□ 1.1
VRK2-205ENST00000432057 DEFB129Q9H1M3 183 aa21.92■■□□□ 1.1
VRK2-205ENST00000432057 PHIPQ8WWQ0 1821 aa21.92■■□□□ 1.1
VRK2-205ENST00000432057 FAM86B1E9PN63 330 aa21.92■■□□□ 1.1
VRK2-205ENST00000432057 TEX33O43247 280 aa21.92■■□□□ 1.1
VRK2-205ENST00000432057 CFBP00751 764 aa21.92■■□□□ 1.1
VRK2-205ENST00000432057 FAM86B2P0C5J1 330 aa21.92■■□□□ 1.1
VRK2-205ENST00000432057 CCT6AP40227 531 aaKnown RBP21.92■■□□□ 1.1
VRK2-205ENST00000432057 STAT3P40763 770 aa21.92■■□□□ 1.1
VRK2-205ENST00000432057 STIM1Q13586 685 aa21.92■■□□□ 1.1
VRK2-205ENST00000432057 Q4G0T1 1027 aa21.92■■□□□ 1.1
VRK2-205ENST00000432057 SLFN12Q8IYM2 578 aa21.92■■□□□ 1.1
VRK2-205ENST00000432057 ADD3Q9UEY8 706 aaKnown RBP21.92■■□□□ 1.1
VRK2-205ENST00000432057 POLR2AP24928 1970 aaKnown RBP21.91■■□□□ 1.1
VRK2-205ENST00000432057 USP27XA6NNY8 438 aa21.91■■□□□ 1.1
VRK2-205ENST00000432057 FCER1AP12319 257 aa21.91■■□□□ 1.1
VRK2-205ENST00000432057 INPP5BP32019 993 aa21.91■■□□□ 1.1
VRK2-205ENST00000432057 PMS1P54277 932 aaKnown RBP21.91■■□□□ 1.1
VRK2-205ENST00000432057 NBPF12Q5TAG4 269 aaPredicted RBP21.91■■□□□ 1.1
VRK2-205ENST00000432057 SPECC1LQ69YQ0 1117 aa21.91■■□□□ 1.1
VRK2-205ENST00000432057 KDM3AQ9Y4C1 1321 aa21.91■■□□□ 1.1
VRK2-205ENST00000432057 PSMA7O14818 248 aa21.9■■□□□ 1.1
VRK2-205ENST00000432057 STK4Q13043 487 aa21.9■■□□□ 1.1
VRK2-205ENST00000432057 DGKZQ13574 1117 aa21.9■■□□□ 1.1
VRK2-205ENST00000432057 KRT31Q15323 416 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms