RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 CRISPLD2Q9H0B8 497 aa21.4■■□□□ 1.02
DDR1-236ENST00000431373 PSTPIP2Q9H939 334 aa21.4■■□□□ 1.02
DDR1-236ENST00000431373 DDX49Q9Y6V7 483 aaKnown RBP21.4■■□□□ 1.02
DDR1-236ENST00000431373 CDKL5O76039 1030 aa21.39■■□□□ 1.01
DDR1-236ENST00000431373 TFRCP02786 760 aaKnown RBP21.39■■□□□ 1.01
DDR1-236ENST00000431373 PDE4DQ08499 809 aa21.39■■□□□ 1.01
DDR1-236ENST00000431373 ARHGEF16Q5VV41 709 aa21.39■■□□□ 1.01
DDR1-236ENST00000431373 LHX8Q68G74 356 aa21.39■■□□□ 1.01
DDR1-236ENST00000431373 FCHSD1Q86WN1 690 aa21.39■■□□□ 1.01
DDR1-236ENST00000431373 IL27Q8NEV9 243 aa21.39■■□□□ 1.01
DDR1-236ENST00000431373 SMARCC2Q8TAQ2 1214 aa21.39■■□□□ 1.01
DDR1-236ENST00000431373 SHISA4Q96DD7 197 aa21.39■■□□□ 1.01
DDR1-236ENST00000431373 PXMP2Q9NR77 195 aa21.39■■□□□ 1.01
DDR1-236ENST00000431373 FAM184BQ9ULE4 1060 aa21.39■■□□□ 1.01
DDR1-236ENST00000431373 LIMCH1Q9UPQ0 1083 aa21.39■■□□□ 1.01
DDR1-236ENST00000431373 PIK3CDO00329 1044 aa21.38■■□□□ 1.01
DDR1-236ENST00000431373 MEIS2O14770 477 aa21.38■■□□□ 1.01
DDR1-236ENST00000431373 AKR1A1P14550 325 aa21.38■■□□□ 1.01
DDR1-236ENST00000431373 EIF2AK2P19525 551 aaKnown RBP21.38■■□□□ 1.01
DDR1-236ENST00000431373 TYW1BQ6NUM6 668 aa21.38■■□□□ 1.01
DDR1-236ENST00000431373 USP17L6PQ6QN14 398 aa21.38■■□□□ 1.01
DDR1-236ENST00000431373 NECAB1Q8N987 351 aa21.38■■□□□ 1.01
DDR1-236ENST00000431373 GTF3C6Q969F1 213 aa21.38■■□□□ 1.01
DDR1-236ENST00000431373 IWS1Q96ST2 819 aa21.38■■□□□ 1.01
DDR1-236ENST00000431373 VTA1Q9NP79 307 aa21.38■■□□□ 1.01
DDR1-236ENST00000431373 ST18O60284 1047 aa21.37■■□□□ 1.01
DDR1-236ENST00000431373 CCDC144BQ3MJ40 725 aa21.37■■□□□ 1.01
DDR1-236ENST00000431373 EEPD1Q7L9B9 569 aa21.37■■□□□ 1.01
DDR1-236ENST00000431373 FBXO16Q8IX29 292 aaPredicted RBP21.37■■□□□ 1.01
DDR1-236ENST00000431373 CCDC12Q8WUD4 166 aaPredicted RBP21.37■■□□□ 1.01
DDR1-236ENST00000431373 OGDHLQ9ULD0 1010 aa21.37■■□□□ 1.01
DDR1-236ENST00000431373 SMCO2A6NFE2 343 aa21.36■■□□□ 1.01
DDR1-236ENST00000431373 DEXIO95424 95 aa21.36■■□□□ 1.01
DDR1-236ENST00000431373 ADCY7P51828 1080 aa21.36■■□□□ 1.01
DDR1-236ENST00000431373 ANO1Q5XXA6 986 aa21.36■■□□□ 1.01
DDR1-236ENST00000431373 TEX2Q8IWB9 1127 aa21.36■■□□□ 1.01
DDR1-236ENST00000431373 ZSCAN31Q96LW9 406 aaPredicted RBP21.36■■□□□ 1.01
DDR1-236ENST00000431373 PDCD2LQ9BRP1 358 aa21.36■■□□□ 1.01
DDR1-236ENST00000431373 GLT8D2Q9H1C3 349 aa21.36■■□□□ 1.01
DDR1-236ENST00000431373 RIC8AQ9NPQ8 531 aa21.36■■□□□ 1.01
DDR1-236ENST00000431373 STK36Q9NRP7 1315 aa21.35■■□□□ 1.01
DDR1-236ENST00000431373 ESYT2A0FGR8 921 aa21.35■■□□□ 1.01
DDR1-236ENST00000431373 NR3C2P08235 984 aa21.35■■□□□ 1.01
DDR1-236ENST00000431373 RARBP10826 455 aa21.35■■□□□ 1.01
DDR1-236ENST00000431373 STXBP2Q15833 593 aa21.35■■□□□ 1.01
DDR1-236ENST00000431373 UBE2SQ16763 222 aa21.35■■□□□ 1.01
DDR1-236ENST00000431373 TAPT1Q6NXT6 567 aa21.35■■□□□ 1.01
DDR1-236ENST00000431373 BRCA2P51587 3418 aa21.35■■□□□ 1.01
DDR1-236ENST00000431373 FRMPD4Q14CM0 1322 aa21.34■■□□□ 1.01
DDR1-236ENST00000431373 CTDNEP1O95476 244 aa21.34■■□□□ 1.01
DDR1-236ENST00000431373 ADCYAP1R1P41586 468 aa21.34■■□□□ 1.01
DDR1-236ENST00000431373 RGS19P49795 217 aa21.34■■□□□ 1.01
DDR1-236ENST00000431373 PGM5Q15124 567 aa21.34■■□□□ 1.01
DDR1-236ENST00000431373 ANKLE1Q8NAG6 615 aa21.34■■□□□ 1.01
DDR1-236ENST00000431373 CCDC148Q8NFR7 591 aa21.34■■□□□ 1.01
DDR1-236ENST00000431373 SH3GLB2Q9NR46 395 aa21.34■■□□□ 1.01
DDR1-236ENST00000431373 PDGFCQ9NRA1 345 aa21.34■■□□□ 1.01
DDR1-236ENST00000431373 SH2B1Q9NRF2 756 aaPredicted RBP21.34■■□□□ 1.01
DDR1-236ENST00000431373 MYCLP12524 364 aaPredicted RBP21.33■■□□□ 1.01
DDR1-236ENST00000431373 CCND2P30279 289 aa21.33■■□□□ 1.01
DDR1-236ENST00000431373 TNFAIP2Q03169 654 aa21.33■■□□□ 1.01
DDR1-236ENST00000431373 IQSEC1Q6DN90 963 aa21.33■■□□□ 1.01
DDR1-236ENST00000431373 IL31RAQ8NI17 732 aa21.33■■□□□ 1.01
DDR1-236ENST00000431373 LENG1Q96BZ8 264 aaPredicted RBP21.33■■□□□ 1.01
DDR1-236ENST00000431373 ZMYND12Q9H0C1 365 aa21.33■■□□□ 1.01
DDR1-236ENST00000431373 C6orf50Q9HD87 102 aa21.33■■□□□ 1.01
DDR1-236ENST00000431373 XPNPEP3Q9NQH7 507 aa21.33■■□□□ 1.01
DDR1-236ENST00000431373 VPS54Q9P1Q0 977 aa21.33■■□□□ 1.01
DDR1-236ENST00000431373 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.32■■□□□ 1
DDR1-236ENST00000431373 RBM47A0AV96 593 aaKnown RBP21.32■■□□□ 1
DDR1-236ENST00000431373 SPDYE3A6NKU9 549 aa21.32■■□□□ 1
DDR1-236ENST00000431373 ADCY6O43306 1168 aa21.32■■□□□ 1
DDR1-236ENST00000431373 DUSP11O75319 330 aaKnown RBP21.32■■□□□ 1
DDR1-236ENST00000431373 EIF3JO75822 258 aaKnown RBP21.32■■□□□ 1
DDR1-236ENST00000431373 FARP2O94887 1054 aaPredicted RBP21.32■■□□□ 1
DDR1-236ENST00000431373 ST3GAL1Q11201 340 aa21.32■■□□□ 1
DDR1-236ENST00000431373 VSIG10LQ86VR7 867 aa21.32■■□□□ 1
DDR1-236ENST00000431373 ARRDC4Q8NCT1 418 aa21.32■■□□□ 1
DDR1-236ENST00000431373 NSUN7Q8NE18 718 aaKnown RBP21.32■■□□□ 1
DDR1-236ENST00000431373 ORC3Q9UBD5 711 aaPredicted RBP21.32■■□□□ 1
DDR1-236ENST00000431373 PCDHA6Q9UN73 950 aa21.32■■□□□ 1
DDR1-236ENST00000431373 PCDHA8Q9Y5H6 950 aa21.32■■□□□ 1
DDR1-236ENST00000431373 FOSP01100 380 aaPredicted RBP21.31■■□□□ 1
DDR1-236ENST00000431373 GNA11P29992 359 aa21.31■■□□□ 1
DDR1-236ENST00000431373 CCDC83Q8IWF9 413 aa21.31■■□□□ 1
DDR1-236ENST00000431373 SCFD2Q8WU76 684 aa21.31■■□□□ 1
DDR1-236ENST00000431373 WDR11Q9BZH6 1224 aa21.31■■□□□ 1
DDR1-236ENST00000431373 EHMT1Q9H9B1 1298 aa21.31■■□□□ 1
DDR1-236ENST00000431373 DTNBO60941 627 aa21.3■■□□□ 1
DDR1-236ENST00000431373 SMPD1P17405 629 aa21.3■■□□□ 1
DDR1-236ENST00000431373 MCM2P49736 904 aa21.3■■□□□ 1
DDR1-236ENST00000431373 CLK2P49760 499 aaKnown RBP21.3■■□□□ 1
DDR1-236ENST00000431373 AP3B2Q13367 1082 aa21.3■■□□□ 1
DDR1-236ENST00000431373 UBE2Q1Q7Z7E8 422 aa21.3■■□□□ 1
DDR1-236ENST00000431373 FAM177A1Q8N128 213 aaPredicted RBP21.3■■□□□ 1
DDR1-236ENST00000431373 BICD2Q8TD16 824 aa21.3■■□□□ 1
DDR1-236ENST00000431373 WASF1Q92558 559 aa21.3■■□□□ 1
DDR1-236ENST00000431373 AIFM3Q96NN9 605 aa21.3■■□□□ 1
DDR1-236ENST00000431373 SYNRGQ9UMZ2 1314 aa21.29■■□□□ 1
DDR1-236ENST00000431373 MYH7BA7E2Y1 1941 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms