RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 MTMR9Q96QG7 549 aa20.63■□□□□ 0.89
CHD1L-204ENST00000431239 NHSQ6T4R5 1651 aa20.63■□□□□ 0.89
CHD1L-204ENST00000431239 SSBP05455 408 aaKnown RBP eCLIP20.63■□□□□ 0.89
CHD1L-204ENST00000431239 CYLC1P35663 651 aaPredicted RBP20.63■□□□□ 0.89
CHD1L-204ENST00000431239 MEA1Q16626 185 aa20.63■□□□□ 0.89
CHD1L-204ENST00000431239 TMEM266Q2M3C6 531 aa20.63■□□□□ 0.89
CHD1L-204ENST00000431239 DRC1Q96MC2 740 aa20.63■□□□□ 0.89
CHD1L-204ENST00000431239 MMS19Q96T76 1030 aa20.63■□□□□ 0.89
CHD1L-204ENST00000431239 UBAP1LF5GYI3 381 aa20.62■□□□□ 0.89
CHD1L-204ENST00000431239 ZNF185O15231 689 aa20.62■□□□□ 0.89
CHD1L-204ENST00000431239 N4BP1O75113 896 aaKnown RBP20.62■□□□□ 0.89
CHD1L-204ENST00000431239 ZBED6P86452 979 aa20.62■□□□□ 0.89
CHD1L-204ENST00000431239 TUBB2AQ13885 445 aa20.62■□□□□ 0.89
CHD1L-204ENST00000431239 CCDC96Q2M329 555 aa20.62■□□□□ 0.89
CHD1L-204ENST00000431239 KCTD1Q719H9 257 aa20.62■□□□□ 0.89
CHD1L-204ENST00000431239 TRAPPC11Q7Z392 1133 aa20.62■□□□□ 0.89
CHD1L-204ENST00000431239 SLF2Q8IX21 1173 aa20.62■□□□□ 0.89
CHD1L-204ENST00000431239 HINFPQ9BQA5 517 aa20.62■□□□□ 0.89
CHD1L-204ENST00000431239 TUBB2BQ9BVA1 445 aa20.62■□□□□ 0.89
CHD1L-204ENST00000431239 RAB21Q9UL25 225 aa20.62■□□□□ 0.89
CHD1L-204ENST00000431239 GAKO14976 1311 aa20.62■□□□□ 0.89
CHD1L-204ENST00000431239 KRT83P78385 493 aa20.62■□□□□ 0.89
CHD1L-204ENST00000431239 CERS3Q8IU89 383 aa20.62■□□□□ 0.89
CHD1L-204ENST00000431239 MMRN2Q9H8L6 949 aa20.62■□□□□ 0.89
CHD1L-204ENST00000431239 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.62■□□□□ 0.89
CHD1L-204ENST00000431239 PSMD14O00487 310 aa20.61■□□□□ 0.89
CHD1L-204ENST00000431239 KRT86O43790 486 aa20.61■□□□□ 0.89
CHD1L-204ENST00000431239 MARCH6O60337 910 aa20.61■□□□□ 0.89
CHD1L-204ENST00000431239 PPP1R11O60927 126 aaPredicted RBP20.61■□□□□ 0.89
CHD1L-204ENST00000431239 ERLIN1O75477 346 aa20.61■□□□□ 0.89
CHD1L-204ENST00000431239 C2CD5Q86YS7 1000 aa20.61■□□□□ 0.89
CHD1L-204ENST00000431239 CCDC155Q8N6L0 562 aa20.61■□□□□ 0.89
CHD1L-204ENST00000431239 TBC1D7Q9P0N9 293 aa20.61■□□□□ 0.89
CHD1L-204ENST00000431239 SAR1BQ9Y6B6 198 aa20.61■□□□□ 0.89
CHD1L-204ENST00000431239 POTEB2H3BUK9 544 aa20.61■□□□□ 0.89
CHD1L-204ENST00000431239 ZMYND10O75800 440 aa20.61■□□□□ 0.89
CHD1L-204ENST00000431239 ECM1Q16610 540 aa20.61■□□□□ 0.89
CHD1L-204ENST00000431239 ADGRF4Q8IZF3 695 aa20.61■□□□□ 0.89
CHD1L-204ENST00000431239 FNBP4Q8N3X1 1017 aaPredicted RBP20.61■□□□□ 0.89
CHD1L-204ENST00000431239 DDX12PQ92771 950 aa20.61■□□□□ 0.89
CHD1L-204ENST00000431239 MAP2K7O14733 419 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 DDR1Q08345 913 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 DOK7Q18PE1 504 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 TBC1D22AQ8WUA7 517 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 GDAP1L1Q96MZ0 367 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 NUP58Q9BVL2 599 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 JMJD4Q9H9V9 463 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 ZNF263O14978 683 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 RAD51AP2Q09MP3 1159 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 HDXQ7Z353 690 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 CERS5Q8N5B7 392 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 CAGE1Q8TC20 777 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 CERKQ8TCT0 537 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 CCDC42Q96M95 316 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 NDST4Q9H3R1 872 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 JADE2Q9NQC1 790 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 ESYT2A0FGR8 921 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 FAM196BA6NMK8 535 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 PHACTR2O75167 634 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 ASPRV1Q53RT3 343 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 KRT79Q5XKE5 535 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 CENPPQ6IPU0 288 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 UNC13DQ70J99 1090 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 FAM163AQ96GL9 167 aaPredicted RBP20.6■□□□□ 0.89
CHD1L-204ENST00000431239 TANGO6Q9C0B7 1094 aa20.6■□□□□ 0.89
CHD1L-204ENST00000431239 CACNB1Q02641 598 aaPredicted RBP20.59■□□□□ 0.89
CHD1L-204ENST00000431239 SHROOM1Q2M3G4 852 aaPredicted RBP20.59■□□□□ 0.89
CHD1L-204ENST00000431239 VPS18Q9P253 973 aa20.59■□□□□ 0.89
CHD1L-204ENST00000431239 L1RE1Q9UN81 338 aa20.59■□□□□ 0.89
CHD1L-204ENST00000431239 USP17L10C9JJH3 530 aa20.59■□□□□ 0.89
CHD1L-204ENST00000431239 ZBTB22O15209 634 aa20.59■□□□□ 0.89
CHD1L-204ENST00000431239 VWA3BQ502W6 1294 aa20.59■□□□□ 0.89
CHD1L-204ENST00000431239 HNRNPLLQ8WVV9 542 aaKnown RBP20.59■□□□□ 0.89
CHD1L-204ENST00000431239 RAD54LQ92698 747 aa20.59■□□□□ 0.89
CHD1L-204ENST00000431239 USP40Q9NVE5 1235 aa20.59■□□□□ 0.89
CHD1L-204ENST00000431239 SERPINB13Q9UIV8 391 aa20.59■□□□□ 0.89
CHD1L-204ENST00000431239 BBOX1O75936 387 aa20.58■□□□□ 0.89
CHD1L-204ENST00000431239 TTLL1O95922 423 aa20.58■□□□□ 0.89
CHD1L-204ENST00000431239 FXR2P51116 673 aaKnown RBP eCLIP20.58■□□□□ 0.894e-8■■■■□ 20.2
CHD1L-204ENST00000431239 ZSCAN29Q8IWY8 852 aaPredicted RBP20.58■□□□□ 0.89
CHD1L-204ENST00000431239 ERGIC2Q96RQ1 377 aa20.58■□□□□ 0.89
CHD1L-204ENST00000431239 PSMB7Q99436 277 aa20.58■□□□□ 0.89
CHD1L-204ENST00000431239 DDX25Q9UHL0 483 aaKnown RBP20.58■□□□□ 0.89
CHD1L-204ENST00000431239 CACNB3P54284 484 aa20.58■□□□□ 0.88
CHD1L-204ENST00000431239 GABPAQ06546 454 aa20.58■□□□□ 0.88
CHD1L-204ENST00000431239 RETREG2Q8NC44 543 aa20.58■□□□□ 0.88
CHD1L-204ENST00000431239 RAB34Q9BZG1 259 aa20.58■□□□□ 0.88
CHD1L-204ENST00000431239 DEF6Q9H4E7 631 aa20.58■□□□□ 0.88
CHD1L-204ENST00000431239 KANSL2Q9H9L4 492 aa20.58■□□□□ 0.88
CHD1L-204ENST00000431239 STK17AQ9UEE5 414 aa20.58■□□□□ 0.88
CHD1L-204ENST00000431239 LY75O60449 1722 aa20.57■□□□□ 0.88
CHD1L-204ENST00000431239 EIF3CLB5ME19 914 aaKnown RBP20.57■□□□□ 0.88
CHD1L-204ENST00000431239 ZNF543Q08ER8 600 aa20.57■□□□□ 0.88
CHD1L-204ENST00000431239 KIF5AQ12840 1032 aa20.57■□□□□ 0.88
CHD1L-204ENST00000431239 CASP8Q14790 479 aa20.57■□□□□ 0.88
CHD1L-204ENST00000431239 SPA17Q15506 151 aa20.57■□□□□ 0.88
CHD1L-204ENST00000431239 RRAGAQ7L523 313 aa20.57■□□□□ 0.88
CHD1L-204ENST00000431239 GSPT2Q8IYD1 628 aaKnown RBP20.57■□□□□ 0.88
CHD1L-204ENST00000431239 CCDC102AQ96A19 550 aa20.57■□□□□ 0.88
CHD1L-204ENST00000431239 EIF3CQ99613 913 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms