RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 SLF1Q9BQI6 1058 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 TMX1Q9H3N1 280 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 CTNND2Q9UQB3 1225 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 RIPK3Q9Y572 518 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 MYH1P12882 1939 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 IGKV6D-41A0A0C4DH26 115 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 A0A1W2PQ27 194 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 A0A1W2PQ64 194 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 A0A1W2PQD8 194 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 POTEB3A0JP26 581 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 POTECB2RU33 542 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 E9PMD0 336 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 MUM1L1Q5H9M0 696 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 POTEBQ6S5H4 581 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 ANKS1AQ92625 1134 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 P2RX7Q99572 595 aaKnown RBP12.69□□□□□ -0.38
SMPD4-205ENST00000431183 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.69□□□□□ -0.381e-6■■■■■ 118.5
SMPD4-205ENST00000431183 FANCLQ9NW38 375 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 POTEFA5A3E0 1075 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 PTGS1P23219 599 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 RCAN1P53805 252 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 FKBP1AP62942 108 aaKnown RBP12.69□□□□□ -0.38
SMPD4-205ENST00000431183 POTEGQ6S5H5 508 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 POTEEQ6S8J3 1075 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 CCDC186Q7Z3E2 898 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 ANKRD35Q8N283 1001 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 NMRK2Q9NPI5 230 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 DNAH12Q6ZR08 3092 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 ZBED4O75132 1171 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 LRMPQ12912 555 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 ENOX2Q16206 610 aaKnown RBP12.69□□□□□ -0.38
SMPD4-205ENST00000431183 PLA2G4DQ86XP0 818 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 APOBEC3FQ8IUX4 373 aaKnown RBP12.69□□□□□ -0.38
SMPD4-205ENST00000431183 PPP1R13LQ8WUF5 828 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 PAGE5Q96GU1 130 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 MRIQ9BWK5 157 aa12.69□□□□□ -0.38
SMPD4-205ENST00000431183 ADARB2Q9NS39 739 aaKnown RBP12.69□□□□□ -0.38
SMPD4-205ENST00000431183 SPDYE4A6NLX3 237 aa12.68□□□□□ -0.38
SMPD4-205ENST00000431183 PTPRAP18433 802 aa12.68□□□□□ -0.38
SMPD4-205ENST00000431183 ATP2C1P98194 919 aaPredicted RBP12.68□□□□□ -0.38
SMPD4-205ENST00000431183 PDLIM2Q96JY6 352 aa12.68□□□□□ -0.38
SMPD4-205ENST00000431183 TRERF1Q96PN7 1200 aa12.68□□□□□ -0.38
SMPD4-205ENST00000431183 MMRN2Q9H8L6 949 aa12.68□□□□□ -0.38
SMPD4-205ENST00000431183 EMILIN3Q9NT22 766 aa12.68□□□□□ -0.38
SMPD4-205ENST00000431183 ZNF831Q5JPB2 1677 aa12.68□□□□□ -0.38
SMPD4-205ENST00000431183 CASZ1Q86V15 1759 aa12.68□□□□□ -0.38
SMPD4-205ENST00000431183 TRIM49BA6NDI0 452 aa12.68□□□□□ -0.38
SMPD4-205ENST00000431183 CTAGE5O15320 804 aa12.68□□□□□ -0.38
SMPD4-205ENST00000431183 TPM4P67936 248 aa12.68□□□□□ -0.38
SMPD4-205ENST00000431183 BAATQ14032 418 aaPredicted RBP12.68□□□□□ -0.38
SMPD4-205ENST00000431183 TREML2Q5T2D2 321 aa12.68□□□□□ -0.38
SMPD4-205ENST00000431183 TMED8Q6PL24 325 aaPredicted RBP12.68□□□□□ -0.38
SMPD4-205ENST00000431183 TMC6Q7Z403 805 aa12.68□□□□□ -0.38
SMPD4-205ENST00000431183 FAM177A1Q8N128 213 aaPredicted RBP12.68□□□□□ -0.38
SMPD4-205ENST00000431183 PRPF38AQ8NAV1 312 aaKnown RBP12.68□□□□□ -0.38
SMPD4-205ENST00000431183 ZNF592Q92610 1267 aa12.68□□□□□ -0.38
SMPD4-205ENST00000431183 TMEM150BA6NC51 233 aa12.68□□□□□ -0.38
SMPD4-205ENST00000431183 CYP2C8P10632 490 aa12.68□□□□□ -0.38
SMPD4-205ENST00000431183 PDE4DQ08499 809 aa12.68□□□□□ -0.38
SMPD4-205ENST00000431183 FERMT2Q96AC1 680 aa12.68□□□□□ -0.38
SMPD4-205ENST00000431183 SAMSN1Q9NSI8 373 aaKnown RBP12.68□□□□□ -0.38
SMPD4-205ENST00000431183 RNF146Q9NTX7 359 aa12.68□□□□□ -0.38
SMPD4-205ENST00000431183 MAN1B1Q9UKM7 699 aa12.68□□□□□ -0.38
SMPD4-205ENST00000431183 NFE2L3Q9Y4A8 694 aa12.68□□□□□ -0.38
SMPD4-205ENST00000431183 SMCHD1A6NHR9 2005 aa12.67□□□□□ -0.38
SMPD4-205ENST00000431183 FAM86B1E9PN63 330 aa12.67□□□□□ -0.38
SMPD4-205ENST00000431183 FAM86B2P0C5J1 330 aa12.67□□□□□ -0.38
SMPD4-205ENST00000431183 ARHGEF16Q5VV41 709 aa12.67□□□□□ -0.38
SMPD4-205ENST00000431183 SEPT14Q6ZU15 432 aa12.67□□□□□ -0.38
SMPD4-205ENST00000431183 SCYL3Q8IZE3 742 aa12.67□□□□□ -0.38
SMPD4-205ENST00000431183 SLC10A4Q96EP9 437 aa12.67□□□□□ -0.38
SMPD4-205ENST00000431183 RIC8AQ9NPQ8 531 aa12.67□□□□□ -0.38
SMPD4-205ENST00000431183 TRMT1Q9NXH9 659 aaKnown RBP12.67□□□□□ -0.38
SMPD4-205ENST00000431183 CTNND1O60716 968 aaKnown RBP12.67□□□□□ -0.38
SMPD4-205ENST00000431183 MYCP01106 439 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-205ENST00000431183 ZSCAN20P17040 1043 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-205ENST00000431183 BACE1P56817 501 aa12.67□□□□□ -0.38
SMPD4-205ENST00000431183 PPP4R3BQ5MIZ7 849 aa12.67□□□□□ -0.38
SMPD4-205ENST00000431183 IL31RAQ8NI17 732 aa12.67□□□□□ -0.38
SMPD4-205ENST00000431183 TNFRSF25Q93038 417 aa12.67□□□□□ -0.38
SMPD4-205ENST00000431183 ZNF668Q96K58 619 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-205ENST00000431183 TAAR1Q96RJ0 339 aa12.67□□□□□ -0.38
SMPD4-205ENST00000431183 DCAF8L1A6NGE4 600 aa12.67□□□□□ -0.38
SMPD4-205ENST00000431183 PGK2P07205 417 aa12.67□□□□□ -0.38
SMPD4-205ENST00000431183 ZNF280AP59817 542 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-205ENST00000431183 RPS6P62753 249 aaKnown RBP12.67□□□□□ -0.38
SMPD4-205ENST00000431183 UTP14CQ5TAP6 766 aaKnown RBP12.67□□□□□ -0.38
SMPD4-205ENST00000431183 BANK1Q8NDB2 785 aa12.67□□□□□ -0.38
SMPD4-205ENST00000431183 RMDN3Q96TC7 470 aa12.67□□□□□ -0.38
SMPD4-205ENST00000431183 VPS16Q9H269 839 aa12.67□□□□□ -0.38
SMPD4-205ENST00000431183 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.67□□□□□ -0.384e-7■□□□□ 10.9
SMPD4-205ENST00000431183 PHF20L1A8MW92 1017 aa12.66□□□□□ -0.38
SMPD4-205ENST00000431183 MEIS2O14770 477 aa12.66□□□□□ -0.38
SMPD4-205ENST00000431183 GAS7O60861 476 aa12.66□□□□□ -0.38
SMPD4-205ENST00000431183 FCER1AP12319 257 aa12.66□□□□□ -0.38
SMPD4-205ENST00000431183 CDCA5Q96FF9 252 aa12.66□□□□□ -0.38
SMPD4-205ENST00000431183 BCAS3Q9H6U6 928 aa12.66□□□□□ -0.38
SMPD4-205ENST00000431183 ARAP2Q8WZ64 1704 aa12.66□□□□□ -0.38
SMPD4-205ENST00000431183 A0A1B0GUL6 1792 aa12.66□□□□□ -0.38
SMPD4-205ENST00000431183 CELF2O95319 508 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms