RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 SNX29Q8TEQ0 813 aa18.76■□□□□ 0.59
USHBP1-203ENST00000431146 PNMA5Q96PV4 448 aa18.76■□□□□ 0.59
USHBP1-203ENST00000431146 KLRC4O43908 158 aa18.75■□□□□ 0.59
USHBP1-203ENST00000431146 CFBP00751 764 aa18.75■□□□□ 0.59
USHBP1-203ENST00000431146 CDK11BP21127 795 aaKnown RBP18.75■□□□□ 0.59
USHBP1-203ENST00000431146 USP11P51784 963 aa18.75■□□□□ 0.59
USHBP1-203ENST00000431146 KMT5BQ4FZB7 885 aa18.75■□□□□ 0.59
USHBP1-203ENST00000431146 FHDC1Q9C0D6 1143 aaPredicted RBP18.75■□□□□ 0.59
USHBP1-203ENST00000431146 RANBP17Q9H2T7 1088 aaKnown RBP18.75■□□□□ 0.59
USHBP1-203ENST00000431146 PCDHA12Q9UN75 941 aa18.75■□□□□ 0.59
USHBP1-203ENST00000431146 ZNF18P17022 549 aa18.74■□□□□ 0.59
USHBP1-203ENST00000431146 PDIA5Q14554 519 aa18.74■□□□□ 0.59
USHBP1-203ENST00000431146 PRR16Q569H4 304 aa18.74■□□□□ 0.59
USHBP1-203ENST00000431146 ZNF658Q5TYW1 1059 aaPredicted RBP18.74■□□□□ 0.59
USHBP1-203ENST00000431146 CRYGNQ8WXF5 182 aa18.74■□□□□ 0.59
USHBP1-203ENST00000431146 RAB34Q9BZG1 259 aa18.74■□□□□ 0.59
USHBP1-203ENST00000431146 SPON1Q9HCB6 807 aa18.74■□□□□ 0.59
USHBP1-203ENST00000431146 POLR2AP24928 1970 aaKnown RBP18.74■□□□□ 0.59
USHBP1-203ENST00000431146 EPS15P42566 896 aa18.74■□□□□ 0.59
USHBP1-203ENST00000431146 HSP90AA2PQ14568 343 aaPredicted RBP18.74■□□□□ 0.59
USHBP1-203ENST00000431146 ECM1Q16610 540 aa18.74■□□□□ 0.59
USHBP1-203ENST00000431146 LRRC8AQ8IWT6 810 aa18.74■□□□□ 0.59
USHBP1-203ENST00000431146 KIAA1524Q8TCG1 905 aa18.74■□□□□ 0.59
USHBP1-203ENST00000431146 CDK5RAP3Q96JB5 506 aa18.74■□□□□ 0.59
USHBP1-203ENST00000431146 CUEDC2Q9H467 287 aa18.74■□□□□ 0.59
USHBP1-203ENST00000431146 BLOC1S4Q9NUP1 217 aa18.74■□□□□ 0.59
USHBP1-203ENST00000431146 INTS13Q9NVM9 706 aa18.74■□□□□ 0.59
USHBP1-203ENST00000431146 RMND1Q9NWS8 449 aa18.74■□□□□ 0.59
USHBP1-203ENST00000431146 GPRC5DQ9NZD1 345 aa18.74■□□□□ 0.59
USHBP1-203ENST00000431146 FEM1BQ9UK73 627 aa18.74■□□□□ 0.59
USHBP1-203ENST00000431146 SBF1O95248 1867 aa18.74■□□□□ 0.59
USHBP1-203ENST00000431146 DICER1Q9UPY3 1922 aaKnown RBP18.73■□□□□ 0.59
USHBP1-203ENST00000431146 FAM86B1E9PN63 330 aa18.73■□□□□ 0.59
USHBP1-203ENST00000431146 CTNND1O60716 968 aaKnown RBP18.73■□□□□ 0.59
USHBP1-203ENST00000431146 FAM86B2P0C5J1 330 aa18.73■□□□□ 0.59
USHBP1-203ENST00000431146 PRCPP42785 496 aa18.73■□□□□ 0.59
USHBP1-203ENST00000431146 MCM6Q14566 821 aa18.73■□□□□ 0.59
USHBP1-203ENST00000431146 KRT79Q5XKE5 535 aa18.73■□□□□ 0.59
USHBP1-203ENST00000431146 KCNK18Q7Z418 384 aa18.73■□□□□ 0.59
USHBP1-203ENST00000431146 ZKSCAN4Q969J2 545 aaPredicted RBP18.73■□□□□ 0.59
USHBP1-203ENST00000431146 TRIM9Q9C026 710 aa18.73■□□□□ 0.59
USHBP1-203ENST00000431146 KCNMB3Q9NPA1 279 aa18.73■□□□□ 0.59
USHBP1-203ENST00000431146 LMNB1P20700 586 aa18.73■□□□□ 0.59
USHBP1-203ENST00000431146 SREBF1P36956 1147 aa18.73■□□□□ 0.59
USHBP1-203ENST00000431146 STAT3P40763 770 aa18.73■□□□□ 0.59
USHBP1-203ENST00000431146 NOLC1Q14978 699 aaKnown RBP eCLIP18.73■□□□□ 0.59
USHBP1-203ENST00000431146 SPATA1Q5VX52 437 aa18.73■□□□□ 0.59
USHBP1-203ENST00000431146 FAM160B2Q86V87 743 aa18.73■□□□□ 0.59
USHBP1-203ENST00000431146 CYP2W1Q8TAV3 490 aa18.73■□□□□ 0.59
USHBP1-203ENST00000431146 GGA3Q9NZ52 723 aa18.73■□□□□ 0.59
USHBP1-203ENST00000431146 CYP3A7-CYP3A51PA0A087WV96 503 aa18.72■□□□□ 0.59
USHBP1-203ENST00000431146 CYP3A7P24462 503 aa18.72■□□□□ 0.59
USHBP1-203ENST00000431146 UBXN2AP68543 259 aa18.72■□□□□ 0.59
USHBP1-203ENST00000431146 ASIC1P78348 528 aa18.72■□□□□ 0.59
USHBP1-203ENST00000431146 MTMR2Q13614 643 aa18.72■□□□□ 0.59
USHBP1-203ENST00000431146 AGBL1Q96MI9 1066 aa18.72■□□□□ 0.59
USHBP1-203ENST00000431146 NAP1L4Q99733 375 aaKnown RBP18.72■□□□□ 0.59
USHBP1-203ENST00000431146 CBFA2T2O43439 604 aa18.71■□□□□ 0.59
USHBP1-203ENST00000431146 FOSP01100 380 aaPredicted RBP18.71■□□□□ 0.59
USHBP1-203ENST00000431146 HIRAP54198 1017 aaPredicted RBP18.71■□□□□ 0.59
USHBP1-203ENST00000431146 LDHDQ86WU2 507 aa18.71■□□□□ 0.59
USHBP1-203ENST00000431146 NELFBQ8WX92 580 aa18.71■□□□□ 0.59
USHBP1-203ENST00000431146 MBOAT7Q96N66 472 aa18.71■□□□□ 0.59
USHBP1-203ENST00000431146 PLA2G6O60733 806 aa18.71■□□□□ 0.59
USHBP1-203ENST00000431146 PAK1Q13153 545 aa18.71■□□□□ 0.59
USHBP1-203ENST00000431146 ETNPPLQ8TBG4 499 aa18.71■□□□□ 0.59
USHBP1-203ENST00000431146 LARP4BQ92615 738 aaKnown RBP18.71■□□□□ 0.59
USHBP1-203ENST00000431146 LENG9Q96B70 501 aa18.71■□□□□ 0.59
USHBP1-203ENST00000431146 ZFP91Q96JP5 570 aaPredicted RBP18.71■□□□□ 0.59
USHBP1-203ENST00000431146 WRNIP1Q96S55 665 aa18.71■□□□□ 0.59
USHBP1-203ENST00000431146 TANGO6Q9C0B7 1094 aa18.71■□□□□ 0.59
USHBP1-203ENST00000431146 MAGEF1Q9HAY2 307 aa18.71■□□□□ 0.59
USHBP1-203ENST00000431146 DOCK1Q14185 1865 aa18.71■□□□□ 0.59
USHBP1-203ENST00000431146 TRIM49BA6NDI0 452 aa18.7■□□□□ 0.58
USHBP1-203ENST00000431146 PIK3CDO00329 1044 aa18.7■□□□□ 0.58
USHBP1-203ENST00000431146 MYL1P05976 194 aa18.7■□□□□ 0.58
USHBP1-203ENST00000431146 KCNB1Q14721 858 aa18.7■□□□□ 0.58
USHBP1-203ENST00000431146 TPD52L1Q16890 204 aaPredicted RBP18.7■□□□□ 0.58
USHBP1-203ENST00000431146 CT47A1Q5JQC4 288 aaPredicted RBP18.7■□□□□ 0.58
USHBP1-203ENST00000431146 SV2BQ7L1I2 683 aa18.7■□□□□ 0.58
USHBP1-203ENST00000431146 DYMQ7RTS9 669 aa18.7■□□□□ 0.58
USHBP1-203ENST00000431146 GPC2Q8N158 579 aa18.7■□□□□ 0.58
USHBP1-203ENST00000431146 HPS3Q969F9 1004 aa18.7■□□□□ 0.58
USHBP1-203ENST00000431146 C7orf25Q9BPX7 421 aa18.7■□□□□ 0.58
USHBP1-203ENST00000431146 KIAA1683Q9H0B3 1180 aa18.7■□□□□ 0.58
USHBP1-203ENST00000431146 MYMKA6NI61 221 aa18.7■□□□□ 0.58
USHBP1-203ENST00000431146 GCOM1H8Y6P7 765 aaPredicted RBP18.7■□□□□ 0.58
USHBP1-203ENST00000431146 RHOBTB3O94955 611 aa18.7■□□□□ 0.58
USHBP1-203ENST00000431146 POLR2MP0CAP2 368 aa18.7■□□□□ 0.58
USHBP1-203ENST00000431146 CCT6AP40227 531 aaKnown RBP18.7■□□□□ 0.58
USHBP1-203ENST00000431146 SPP2Q13103 211 aa18.7■□□□□ 0.58
USHBP1-203ENST00000431146 PRKG1Q13976 671 aa18.7■□□□□ 0.58
USHBP1-203ENST00000431146 ARMCX5Q6P1M9 558 aa18.7■□□□□ 0.58
USHBP1-203ENST00000431146 DLK2Q6UY11 383 aa18.7■□□□□ 0.58
USHBP1-203ENST00000431146 CPXCR1Q8N123 301 aa18.7■□□□□ 0.58
USHBP1-203ENST00000431146 RAD54LQ92698 747 aa18.7■□□□□ 0.58
USHBP1-203ENST00000431146 IMPACTQ9P2X3 320 aa18.7■□□□□ 0.58
USHBP1-203ENST00000431146 WDR46O15213 610 aaKnown RBP18.69■□□□□ 0.58
USHBP1-203ENST00000431146 DDNO94850 711 aaPredicted RBP18.69■□□□□ 0.58
USHBP1-203ENST00000431146 FCER1AP12319 257 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms