RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 C10orf53Q8N6V4 93 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 BCL7CQ8WUZ0 217 aaPredicted RBP5.88□□□□□ -1.47
PTPN4-203ENST00000430976 LMBR1Q8WVP7 490 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 ZNF845Q96IR2 970 aaPredicted RBP5.88□□□□□ -1.47
PTPN4-203ENST00000430976 SDF4Q9BRK5 362 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 KATNAL1Q9BW62 490 aa5.88□□□□□ -1.47
PTPN4-203ENST00000430976 FAF1Q9UNN5 650 aaPredicted RBP5.88□□□□□ -1.47
PTPN4-203ENST00000430976 CCDC163A0A0D9SF12 145 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 ZSCAN12O43309 604 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 RANBP6O60518 1105 aaKnown RBP5.87□□□□□ -1.47
PTPN4-203ENST00000430976 DGKIO75912 1065 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 DNAJC8O75937 253 aaPredicted RBP5.87□□□□□ -1.47
PTPN4-203ENST00000430976 TMCC1O94876 653 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 SAFBQ15424 915 aaKnown RBP eCLIP5.87□□□□□ -1.47
PTPN4-203ENST00000430976 WDR45BQ5MNZ6 344 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 LRSAM1Q6UWE0 723 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 PHLDB2Q86SQ0 1253 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 PALB2Q86YC2 1186 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 PROM2Q8N271 834 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 C2orf69Q8N8R5 385 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 GPT2Q8TD30 523 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 HDAC2Q92769 488 aaKnown RBP5.87□□□□□ -1.47
PTPN4-203ENST00000430976 EXT2Q93063 718 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 L3MBTL3Q96JM7 780 aaPredicted RBP5.87□□□□□ -1.47
PTPN4-203ENST00000430976 DDX50Q9BQ39 737 aaKnown RBP5.87□□□□□ -1.47
PTPN4-203ENST00000430976 ZC4H2Q9NQZ6 224 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 FARSBQ9NSD9 589 aaKnown RBP5.87□□□□□ -1.47
PTPN4-203ENST00000430976 PARP2Q9UGN5 583 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 FBXO10Q9UK96 956 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 KIAA1257Q9ULG3 409 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 EIF4E1BA6NMX2 242 aaKnown RBP5.87□□□□□ -1.47
PTPN4-203ENST00000430976 TP73O15350 636 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 TMED10P49755 219 aaKnown RBP5.87□□□□□ -1.47
PTPN4-203ENST00000430976 CACNB2Q08289 660 aaPredicted RBP5.87□□□□□ -1.47
PTPN4-203ENST00000430976 ZSCAN23Q3MJ62 389 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 B4GALNT4Q76KP1 1039 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 CCDC50Q8IVM0 306 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 NAT8LQ8N9F0 302 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 TMEM206Q9H813 350 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 RPRD1BQ9NQG5 326 aaKnown RBP5.87□□□□□ -1.47
PTPN4-203ENST00000430976 PTBP2Q9UKA9 531 aaKnown RBP5.87□□□□□ -1.47
PTPN4-203ENST00000430976 RIMKLBQ9ULI2 386 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 SPDYE3A6NKU9 549 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 KRT5P13647 590 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 MUTP22033 750 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 PEX5P50542 639 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 DSTNP60981 165 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 KDSRQ06136 332 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 ITKQ08881 620 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 TRPC3Q13507 836 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 ANKDD1AQ495B1 522 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 MINDY4Q4G0A6 757 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 FSCBQ5H9T9 825 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 FAM83BQ5T0W9 1011 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 NFRKBQ6P4R8 1299 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 PI16Q6UXB8 463 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 CABP7Q86V35 215 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 GALNT13Q8IUC8 556 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 ANKRD13CQ8N6S4 541 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 CPLX3Q8WVH0 158 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 RBM18Q96H35 190 aaKnown RBP5.87□□□□□ -1.47
PTPN4-203ENST00000430976 GORASP1Q9BQQ3 440 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 ZKSCAN3Q9BRR0 538 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 CEP44Q9C0F1 390 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 SERHL2Q9H4I8 314 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 PARVBQ9HBI1 364 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 SUCLA2Q9P2R7 463 aaPredicted RBP5.87□□□□□ -1.47
PTPN4-203ENST00000430976 ITGB1BP2Q9UKP3 347 aa5.87□□□□□ -1.47
PTPN4-203ENST00000430976 GOLGA8OA6NCC3 632 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 GOLGA8NF8WBI6 632 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 BBOX1O75936 387 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 COL6A1P12109 1028 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 ARID5AQ03989 594 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 MOGSQ13724 837 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 BYSLQ13895 437 aaKnown RBP5.86□□□□□ -1.47
PTPN4-203ENST00000430976 KANK4Q5T7N3 995 aaPredicted RBP5.86□□□□□ -1.47
PTPN4-203ENST00000430976 IQCEQ6IPM2 695 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 ARHGAP11AQ6P4F7 1023 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 NLRP9Q7RTR0 991 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 USP38Q8NB14 1042 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 CCDC8Q9H0W5 538 aaPredicted RBP5.86□□□□□ -1.47
PTPN4-203ENST00000430976 VPS16Q9H269 839 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 PRM3Q9NNZ6 103 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.86□□□□□ -1.47
PTPN4-203ENST00000430976 DMTF1Q9Y222 760 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 EPN1Q9Y6I3 576 aaPredicted RBP5.86□□□□□ -1.47
PTPN4-203ENST00000430976 KIF21AQ7Z4S6 1674 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 SH3D21A4FU49 640 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 PSMD14O00487 310 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 EBAG9O00559 213 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 DDX58O95786 925 aaKnown RBP5.86□□□□□ -1.47
PTPN4-203ENST00000430976 STAT3P40763 770 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 DYNC1I2Q13409 638 aaKnown RBP5.86□□□□□ -1.47
PTPN4-203ENST00000430976 SNCBQ16143 134 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 NXNQ6DKJ4 435 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 OTUD7BQ6GQQ9 843 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 TWF2Q6IBS0 349 aaKnown RBP5.86□□□□□ -1.47
PTPN4-203ENST00000430976 TBC1D9Q6ZT07 1266 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 URGCPQ8TCY9 931 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 ZNF653Q96CK0 615 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms