RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ADALQ6DHV7 355 aa14.34□□□□□ -0.11
PTCH1-207ENST00000429896 LRSAM1Q6UWE0 723 aa14.34□□□□□ -0.11
PTCH1-207ENST00000429896 NR5A1Q13285 461 aa14.34□□□□□ -0.11
PTCH1-207ENST00000429896 TTBK2Q6IQ55 1244 aa14.34□□□□□ -0.11
PTCH1-207ENST00000429896 SLC25A27O95847 323 aa14.34□□□□□ -0.11
PTCH1-207ENST00000429896 MTMR1Q13613 665 aa14.34□□□□□ -0.11
PTCH1-207ENST00000429896 TTLL4Q14679 1199 aa14.34□□□□□ -0.11
PTCH1-207ENST00000429896 RNF187Q5TA31 235 aaPredicted RBP14.34□□□□□ -0.11
PTCH1-207ENST00000429896 STAG2Q8N3U4 1231 aa14.34□□□□□ -0.11
PTCH1-207ENST00000429896 ZSWIM4Q9H7M6 989 aa14.34□□□□□ -0.11
PTCH1-207ENST00000429896 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.34□□□□□ -0.11
PTCH1-207ENST00000429896 CLIC4Q9Y696 253 aa14.34□□□□□ -0.11
PTCH1-207ENST00000429896 DCAF17Q5H9S7 520 aaPredicted RBP14.34□□□□□ -0.11
PTCH1-207ENST00000429896 USP17L6PQ6QN14 398 aa14.34□□□□□ -0.11
PTCH1-207ENST00000429896 OPTNQ96CV9 577 aa14.34□□□□□ -0.11
PTCH1-207ENST00000429896 ALDH8A1Q9H2A2 487 aaPredicted RBP14.34□□□□□ -0.11
PTCH1-207ENST00000429896 SERTAD1Q9UHV2 236 aa14.34□□□□□ -0.11
PTCH1-207ENST00000429896 KCNH4Q9UQ05 1017 aa14.34□□□□□ -0.11
PTCH1-207ENST00000429896 TYRO3Q06418 890 aa14.33□□□□□ -0.11
PTCH1-207ENST00000429896 POSTNQ15063 836 aa14.33□□□□□ -0.11
PTCH1-207ENST00000429896 SPOUT1Q5T280 376 aaKnown RBP14.33□□□□□ -0.11
PTCH1-207ENST00000429896 APOBEC3HQ6NTF7 200 aaKnown RBP14.33□□□□□ -0.11
PTCH1-207ENST00000429896 TMC6Q7Z403 805 aa14.33□□□□□ -0.11
PTCH1-207ENST00000429896 AK8Q96MA6 479 aa14.33□□□□□ -0.11
PTCH1-207ENST00000429896 MRIQ9BWK5 157 aa14.33□□□□□ -0.11
PTCH1-207ENST00000429896 BARHL2Q9NY43 387 aa14.33□□□□□ -0.11
PTCH1-207ENST00000429896 RIC1Q4ADV7 1423 aa14.33□□□□□ -0.11
PTCH1-207ENST00000429896 CRACR2AQ9BSW2 395 aa14.33□□□□□ -0.12
PTCH1-207ENST00000429896 PDGFDQ9GZP0 370 aaPredicted RBP14.33□□□□□ -0.12
PTCH1-207ENST00000429896 BLZF1Q9H2G9 400 aa14.33□□□□□ -0.12
PTCH1-207ENST00000429896 KIAA1024Q9UPX6 916 aa14.33□□□□□ -0.12
PTCH1-207ENST00000429896 PALM3A6NDB9 673 aaPredicted RBP14.33□□□□□ -0.12
PTCH1-207ENST00000429896 FKBP1CQ5VVH2 108 aa14.33□□□□□ -0.12
PTCH1-207ENST00000429896 AIFM3Q96NN9 605 aa14.33□□□□□ -0.12
PTCH1-207ENST00000429896 SPZ1Q9BXG8 430 aa14.33□□□□□ -0.12
PTCH1-207ENST00000429896 AKT3Q9Y243 479 aa14.33□□□□□ -0.12
PTCH1-207ENST00000429896 LRRC37A3O60309 1634 aa14.33□□□□□ -0.12
PTCH1-207ENST00000429896 CDC27P30260 824 aa14.33□□□□□ -0.12
PTCH1-207ENST00000429896 UBASH3AP57075 661 aa14.33□□□□□ -0.12
PTCH1-207ENST00000429896 DMP1Q13316 513 aaPredicted RBP14.33□□□□□ -0.12
PTCH1-207ENST00000429896 WDR44Q5JSH3 913 aa14.33□□□□□ -0.12
PTCH1-207ENST00000429896 CHADLQ6NUI6 762 aa14.33□□□□□ -0.12
PTCH1-207ENST00000429896 SLC7A3Q8WY07 619 aa14.33□□□□□ -0.12
PTCH1-207ENST00000429896 CLSTN2Q9H4D0 955 aa14.33□□□□□ -0.12
PTCH1-207ENST00000429896 PCDHB13Q9Y5F0 798 aa14.33□□□□□ -0.12
PTCH1-207ENST00000429896 GLTPD2A6NH11 291 aa14.33□□□□□ -0.12
PTCH1-207ENST00000429896 NOP2P46087 812 aaKnown RBP14.33□□□□□ -0.12
PTCH1-207ENST00000429896 UVSSAQ2YD98 709 aa14.33□□□□□ -0.12
PTCH1-207ENST00000429896 IDI2Q9BXS1 227 aa14.33□□□□□ -0.12
PTCH1-207ENST00000429896 SYNCQ9H7C4 482 aa14.33□□□□□ -0.12
PTCH1-207ENST00000429896 CETN2P41208 172 aa14.32□□□□□ -0.12
PTCH1-207ENST00000429896 EXOSC10Q01780 885 aaKnown RBP14.32□□□□□ -0.12
PTCH1-207ENST00000429896 TRPC3Q13507 836 aa14.32□□□□□ -0.12
PTCH1-207ENST00000429896 FAM200AQ8TCP9 573 aa14.32□□□□□ -0.12
PTCH1-207ENST00000429896 UBXN4Q92575 508 aa14.32□□□□□ -0.12
PTCH1-207ENST00000429896 JAK3P52333 1124 aa14.32□□□□□ -0.12
PTCH1-207ENST00000429896 SYMPKQ92797 1274 aaKnown RBP14.32□□□□□ -0.12
PTCH1-207ENST00000429896 WTIPA6NIX2 430 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-207ENST00000429896 FAM163AQ96GL9 167 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-207ENST00000429896 RNF216Q9NWF9 866 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-207ENST00000429896 PFKFB1P16118 471 aa14.32□□□□□ -0.12
PTCH1-207ENST00000429896 GJC1P36383 396 aa14.32□□□□□ -0.12
PTCH1-207ENST00000429896 FCGRTP55899 365 aa14.32□□□□□ -0.12
PTCH1-207ENST00000429896 TCRBV5S4A2TA0A5A2 114 aa14.32□□□□□ -0.12
PTCH1-207ENST00000429896 CETN3O15182 167 aa14.32□□□□□ -0.12
PTCH1-207ENST00000429896 BACE1P56817 501 aa14.32□□□□□ -0.12
PTCH1-207ENST00000429896 CUL4AQ13619 759 aa14.32□□□□□ -0.12
PTCH1-207ENST00000429896 NEDD9Q14511 834 aa14.32□□□□□ -0.12
PTCH1-207ENST00000429896 PPP2R5AQ15172 486 aa14.32□□□□□ -0.12
PTCH1-207ENST00000429896 TTC12Q9H892 705 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-207ENST00000429896 RIC8AQ9NPQ8 531 aa14.32□□□□□ -0.12
PTCH1-207ENST00000429896 PRR12Q9ULL5 1215 aa14.32□□□□□ -0.12
PTCH1-207ENST00000429896 PLCH1Q4KWH8 1693 aa14.32□□□□□ -0.12
PTCH1-207ENST00000429896 K7ENM7 598 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 KIF5CO60282 957 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 HLTFQ14527 1009 aaKnown RBP eCLIP14.31□□□□□ -0.12
PTCH1-207ENST00000429896 NACC1Q96RE7 527 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 LPXNO60711 386 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 LMAN1P49257 510 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 NELFCDQ8IXH7 590 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 STAMQ92783 540 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 ADPGKQ9BRR6 497 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 STRCP1A6NGW2 1772 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 PDHBP11177 359 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 SMC1AQ14683 1233 aaKnown RBP14.31□□□□□ -0.12
PTCH1-207ENST00000429896 PTPN14Q15678 1187 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 IGDCC4Q8TDY8 1250 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 PANK4Q9NVE7 773 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 COL4A3BPQ9Y5P4 624 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 USO1O60763 962 aaKnown RBP14.31□□□□□ -0.12
PTCH1-207ENST00000429896 ATP2C2O75185 946 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 INPP5BP32019 993 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 ARL1P40616 181 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-207ENST00000429896 LIG4P49917 911 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 RNF169Q8NCN4 708 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 CEP170P1Q96L14 293 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 TMEM106CQ9BVX2 250 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 LRRIQ4A6NIV6 560 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 EXOC3O60645 756 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 PPP6R2O75170 966 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms