RNA–Protein interactions for RNA: ENST00000428966.1

PABPC1P11-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 11, humanhuman

BASIC

Gene PABPC1P11, Length 2,007 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11-201ENST00000428966 CALML3P27482 149 aa13.35□□□□□ -0.27
PABPC1P11-201ENST00000428966 PDIA3P30101 505 aaKnown RBP13.35□□□□□ -0.27
PABPC1P11-201ENST00000428966 RRP36Q96EU6 259 aaKnown RBP13.35□□□□□ -0.27
PABPC1P11-201ENST00000428966 RBM28Q9NW13 759 aaKnown RBP13.35□□□□□ -0.27
PABPC1P11-201ENST00000428966 TMEM63CQ9P1W3 806 aa13.35□□□□□ -0.27
PABPC1P11-201ENST00000428966 MRPL11Q9Y3B7 192 aaKnown RBP13.35□□□□□ -0.27
PABPC1P11-201ENST00000428966 CNTNAP5Q8WYK1 1306 aa13.35□□□□□ -0.27
PABPC1P11-201ENST00000428966 SGPL1O95470 568 aa13.34□□□□□ -0.27
PABPC1P11-201ENST00000428966 LHX8Q68G74 356 aa13.34□□□□□ -0.27
PABPC1P11-201ENST00000428966 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.34□□□□□ -0.27
PABPC1P11-201ENST00000428966 ARMCX2Q7L311 632 aa13.34□□□□□ -0.27
PABPC1P11-201ENST00000428966 MSL3Q8N5Y2 521 aaKnown RBP13.34□□□□□ -0.27
PABPC1P11-201ENST00000428966 RGS22Q8NE09 1264 aa13.34□□□□□ -0.27
PABPC1P11-201ENST00000428966 COL20A1Q9P218 1284 aa13.34□□□□□ -0.27
PABPC1P11-201ENST00000428966 RBM27Q9P2N5 1060 aaKnown RBP13.34□□□□□ -0.27
PABPC1P11-201ENST00000428966 SYNGAP1Q96PV0 1343 aa13.34□□□□□ -0.27
PABPC1P11-201ENST00000428966 NID2Q14112 1375 aa13.34□□□□□ -0.27
PABPC1P11-201ENST00000428966 ZNFX1Q9P2E3 1918 aaKnown RBP13.34□□□□□ -0.27
PABPC1P11-201ENST00000428966 TNRC18O15417 2968 aaPredicted RBP13.34□□□□□ -0.27
PABPC1P11-201ENST00000428966 ZNF865P0CJ78 1059 aaPredicted RBP13.34□□□□□ -0.27
PABPC1P11-201ENST00000428966 CNGA1P29973 690 aa13.34□□□□□ -0.27
PABPC1P11-201ENST00000428966 NCOA5Q9HCD5 579 aaKnown RBP13.34□□□□□ -0.27
PABPC1P11-201ENST00000428966 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.34□□□□□ -0.27
PABPC1P11-201ENST00000428966 SEC63Q9UGP8 760 aaKnown RBP13.34□□□□□ -0.27
PABPC1P11-201ENST00000428966 NOL7Q9UMY1 257 aaKnown RBP13.34□□□□□ -0.27
PABPC1P11-201ENST00000428966 SYCE3A1L190 88 aa13.33□□□□□ -0.28
PABPC1P11-201ENST00000428966 PPFIA3O75145 1194 aa13.33□□□□□ -0.28
PABPC1P11-201ENST00000428966 CFBP00751 764 aa13.33□□□□□ -0.28
PABPC1P11-201ENST00000428966 RGS19P49795 217 aa13.33□□□□□ -0.28
PABPC1P11-201ENST00000428966 TERF1P54274 439 aa13.33□□□□□ -0.28
PABPC1P11-201ENST00000428966 CCT2P78371 535 aaKnown RBP13.33□□□□□ -0.28
PABPC1P11-201ENST00000428966 SYTL5Q8TDW5 730 aaPredicted RBP13.33□□□□□ -0.28
PABPC1P11-201ENST00000428966 KATNBL1Q9H079 304 aa13.33□□□□□ -0.28
PABPC1P11-201ENST00000428966 CRISPLD2Q9H0B8 497 aa13.33□□□□□ -0.28
PABPC1P11-201ENST00000428966 CNPY2Q9Y2B0 182 aa13.33□□□□□ -0.28
PABPC1P11-201ENST00000428966 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.33□□□□□ -0.28
PABPC1P11-201ENST00000428966 V9GY48 417 aaPredicted RBP13.33□□□□□ -0.28
PABPC1P11-201ENST00000428966 SEPT4O43236 478 aa13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 OFD1O75665 1012 aa13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 HOXA13P31271 388 aaPredicted RBP13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 ALDH5A1P51649 535 aaPredicted RBP13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 HSD17B4P51659 736 aa13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 GHRHRQ02643 423 aa13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 PPP2R5BQ15173 497 aa13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 NTRK3Q16288 839 aa13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 ANO1Q5XXA6 986 aa13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 MCF2L2Q86YR7 1114 aa13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 ZNF274Q96GC6 653 aaPredicted RBP13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 CCDC39Q9UFE4 941 aa13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 DDX20Q9UHI6 824 aaKnown RBP13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 CCDC196A0A1B0GTZ2 297 aa13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 RRP9O43818 475 aaKnown RBP13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 AK2P54819 239 aa13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 FOXD4L5Q5VV16 416 aaPredicted RBP13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 FOXD4L4Q8WXT5 416 aaPredicted RBP13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 GPKOWQ92917 476 aaPredicted RBP eCLIP13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 TAAR1Q96RJ0 339 aa13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 ALDH8A1Q9H2A2 487 aaPredicted RBP13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 TSPY26PQ9H489 355 aa13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 ADD3Q9UEY8 706 aaKnown RBP13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 NRBP1Q9UHY1 535 aa13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 TPCN1Q9ULQ1 816 aa13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 LCTP09848 1927 aa13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 PLXNA1Q9UIW2 1896 aa13.32□□□□□ -0.28
PABPC1P11-201ENST00000428966 ASB14A6NK59 587 aa13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 ADCY6O43306 1168 aa13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 ZNF500O60304 480 aaPredicted RBP13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 LETM1O95202 739 aaPredicted RBP13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 TFRCP02786 760 aaKnown RBP13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 TRAF1Q13077 416 aa13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 STK3Q13188 491 aa13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 ACVR2BQ13705 512 aa13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 TYW1BQ6NUM6 668 aa13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 EEPD1Q7L9B9 569 aa13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 HEATR3Q7Z4Q2 680 aa13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 TMEM87AQ8NBN3 555 aa13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 DNERQ8NFT8 737 aa13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 MORC4Q8TE76 937 aa13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 PHKBQ93100 1093 aa13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 LENG1Q96BZ8 264 aaPredicted RBP13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 MAF1Q9H063 256 aa13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 ABHD16BQ9H3Z7 469 aa13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 ZHX1Q9UKY1 873 aaPredicted RBP13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 OGDHLQ9ULD0 1010 aa13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 LIMCH1Q9UPQ0 1083 aa13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 ATP6V1DQ9Y5K8 247 aa13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 RBBP6Q7Z6E9 1792 aaKnown RBP13.31□□□□□ -0.28
PABPC1P11-201ENST00000428966 EDNRBP24530 442 aa13.3□□□□□ -0.28
PABPC1P11-201ENST00000428966 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
PABPC1P11-201ENST00000428966 WWC2Q6AWC2 1192 aa13.3□□□□□ -0.28
PABPC1P11-201ENST00000428966 NOL8Q76FK4 1167 aaKnown RBP13.3□□□□□ -0.28
PABPC1P11-201ENST00000428966 UBE2Q1Q7Z7E8 422 aa13.3□□□□□ -0.28
PABPC1P11-201ENST00000428966 FAM184AQ8NB25 1140 aa13.3□□□□□ -0.28
PABPC1P11-201ENST00000428966 CSPP1Q1MSJ5 1256 aa13.3□□□□□ -0.28
PABPC1P11-201ENST00000428966 CCDC144BQ3MJ40 725 aa13.3□□□□□ -0.28
PABPC1P11-201ENST00000428966 FBXO16Q8IX29 292 aaPredicted RBP13.3□□□□□ -0.28
PABPC1P11-201ENST00000428966 SPDYE1Q8NFV5 336 aaPredicted RBP13.3□□□□□ -0.28
PABPC1P11-201ENST00000428966 UBE2Q2Q8WVN8 375 aa13.3□□□□□ -0.28
PABPC1P11-201ENST00000428966 BBXQ8WY36 941 aaPredicted RBP13.3□□□□□ -0.28
PABPC1P11-201ENST00000428966 RMDN3Q96TC7 470 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms