RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 USP17L10C9JJH3 530 aa15.3■□□□□ 0.04
THBS3-202ENST00000428962 PES1O00541 588 aaKnown RBP15.3■□□□□ 0.04
THBS3-202ENST00000428962 FGFR1OPO95684 399 aaKnown RBP15.3■□□□□ 0.04
THBS3-202ENST00000428962 KRT9P35527 623 aa15.3■□□□□ 0.04
THBS3-202ENST00000428962 SLC1A4P43007 532 aa15.3■□□□□ 0.04
THBS3-202ENST00000428962 MAP3K9P80192 1104 aa15.3■□□□□ 0.04
THBS3-202ENST00000428962 UBE2SQ16763 222 aa15.3■□□□□ 0.04
THBS3-202ENST00000428962 KCTD1Q719H9 257 aa15.3■□□□□ 0.04
THBS3-202ENST00000428962 RETREG2Q8NC44 543 aa15.3■□□□□ 0.04
THBS3-202ENST00000428962 RAD54LQ92698 747 aa15.3■□□□□ 0.04
THBS3-202ENST00000428962 CNKSR1Q969H4 720 aa15.3■□□□□ 0.04
THBS3-202ENST00000428962 IQCDQ96DY2 449 aa15.3■□□□□ 0.04
THBS3-202ENST00000428962 DUSP9Q99956 384 aaKnown RBP15.3■□□□□ 0.04
THBS3-202ENST00000428962 TUBGCP2Q9BSJ2 902 aa15.3■□□□□ 0.04
THBS3-202ENST00000428962 ARGLU1Q9NWB6 273 aaPredicted RBP15.3■□□□□ 0.04
THBS3-202ENST00000428962 FANCGO15287 622 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 MARCH6O60337 910 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 SLC16A2P36021 539 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 STK4Q13043 487 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 TUBB2AQ13885 445 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 SEPT2Q15019 361 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 ERCC6LQ2NKX8 1250 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 TMEM119Q4V9L6 283 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 ARHGAP29Q52LW3 1261 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 TMEM179Q6ZVK1 233 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 ZSCAN29Q8IWY8 852 aaPredicted RBP15.29■□□□□ 0.04
THBS3-202ENST00000428962 OR8K1Q8NGG5 319 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 ZNF507Q8TCN5 953 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 PNMA5Q96PV4 448 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 TUBB2BQ9BVA1 445 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 DNAJC18Q9H819 358 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 BLOC1S4Q9NUP1 217 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 OGFRQ9NZT2 677 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 MYO1AQ9UBC5 1043 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 LUC7L2Q9Y383 392 aaKnown RBP15.29■□□□□ 0.04
THBS3-202ENST00000428962 MRFAP1Q9Y605 127 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 ZNF646O15015 1829 aaPredicted RBP15.29■□□□□ 0.04
THBS3-202ENST00000428962 COL2A1P02458 1487 aaPredicted RBP15.29■□□□□ 0.04
THBS3-202ENST00000428962 TADA3O75528 432 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 EEF2P13639 858 aaKnown RBP15.29■□□□□ 0.04
THBS3-202ENST00000428962 ERVK-24P63145 666 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 TCP10Q12799 353 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 PSMD2Q13200 908 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 SLFN13Q68D06 897 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 MSL1Q68DK7 614 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 FBXO38Q6PIJ6 1188 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 SUPT20HQ8NEM7 779 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 CNOT6LQ96LI5 555 aaKnown RBP15.29■□□□□ 0.04
THBS3-202ENST00000428962 CARD6Q9BX69 1037 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 NT5C3AQ9H0P0 336 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 LZTFL1Q9NQ48 299 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 FAM198AQ9UFP1 575 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 CAPN11Q9UMQ6 739 aa15.29■□□□□ 0.04
THBS3-202ENST00000428962 POTEMA6NI47 508 aa15.28■□□□□ 0.04
THBS3-202ENST00000428962 MTIF2P46199 727 aaKnown RBP15.28■□□□□ 0.04
THBS3-202ENST00000428962 ICA1Q05084 483 aa15.28■□□□□ 0.04
THBS3-202ENST00000428962 PPP2R3AQ06190 1150 aa15.28■□□□□ 0.04
THBS3-202ENST00000428962 AP3B2Q13367 1082 aa15.28■□□□□ 0.04
THBS3-202ENST00000428962 MCM6Q14566 821 aa15.28■□□□□ 0.04
THBS3-202ENST00000428962 CDC37Q16543 378 aaPredicted RBP15.28■□□□□ 0.04
THBS3-202ENST00000428962 QRICH1Q2TAL8 776 aa15.28■□□□□ 0.04
THBS3-202ENST00000428962 FKBP15Q5T1M5 1219 aa15.28■□□□□ 0.04
THBS3-202ENST00000428962 ANKRD40Q6AI12 368 aa15.28■□□□□ 0.04
THBS3-202ENST00000428962 CC2D2BQ6DHV5 1058 aa15.28■□□□□ 0.04
THBS3-202ENST00000428962 TATDN1Q6P1N9 297 aa15.28■□□□□ 0.04
THBS3-202ENST00000428962 ZFPM1Q8IX07 1006 aa15.28■□□□□ 0.04
THBS3-202ENST00000428962 DNAJC7Q99615 494 aa15.28■□□□□ 0.04
THBS3-202ENST00000428962 ZMYND15Q9H091 742 aa15.28■□□□□ 0.04
THBS3-202ENST00000428962 ARFGEF1Q9Y6D6 1849 aa15.28■□□□□ 0.04
THBS3-202ENST00000428962 ABCB11O95342 1321 aa15.27■□□□□ 0.04
THBS3-202ENST00000428962 DDTLA6NHG4 134 aaPredicted RBP15.27■□□□□ 0.04
THBS3-202ENST00000428962 MYMKA6NI61 221 aa15.27■□□□□ 0.04
THBS3-202ENST00000428962 B4DLN1 442 aa15.27■□□□□ 0.04
THBS3-202ENST00000428962 EDIL3O43854 480 aa15.27■□□□□ 0.04
THBS3-202ENST00000428962 ENTPD3O75355 529 aa15.27■□□□□ 0.04
THBS3-202ENST00000428962 FCER1AP12319 257 aa15.27■□□□□ 0.04
THBS3-202ENST00000428962 H2AFXP16104 143 aaPredicted RBP15.27■□□□□ 0.04
THBS3-202ENST00000428962 USP11P51784 963 aa15.27■□□□□ 0.04
THBS3-202ENST00000428962 FOXR2Q6PJQ5 311 aa15.27■□□□□ 0.04
THBS3-202ENST00000428962 MOXD1Q6UVY6 613 aa15.27■□□□□ 0.04
THBS3-202ENST00000428962 GUF1Q8N442 669 aaKnown RBP15.27■□□□□ 0.04
THBS3-202ENST00000428962 KIAA0895Q8NCT3 520 aa15.27■□□□□ 0.04
THBS3-202ENST00000428962 GMCL1P1Q8NEA9 526 aa15.27■□□□□ 0.04
THBS3-202ENST00000428962 FHDC1Q9C0D6 1143 aaPredicted RBP15.27■□□□□ 0.04
THBS3-202ENST00000428962 DDX41Q9UJV9 622 aaKnown RBP15.27■□□□□ 0.04
THBS3-202ENST00000428962 PCDHA1Q9Y5I3 950 aa15.27■□□□□ 0.04
THBS3-202ENST00000428962 ATRNL1Q5VV63 1379 aa15.27■□□□□ 0.03
THBS3-202ENST00000428962 TTC26A0AVF1 554 aa15.27■□□□□ 0.03
THBS3-202ENST00000428962 RAD21O60216 631 aa15.27■□□□□ 0.03
THBS3-202ENST00000428962 CACNB3P54284 484 aa15.27■□□□□ 0.03
THBS3-202ENST00000428962 LRRC63Q05C16 580 aa15.27■□□□□ 0.03
THBS3-202ENST00000428962 ABCB5Q2M3G0 1257 aa15.27■□□□□ 0.03
THBS3-202ENST00000428962 HYIQ5T013 277 aa15.27■□□□□ 0.03
THBS3-202ENST00000428962 CENPPQ6IPU0 288 aa15.27■□□□□ 0.03
THBS3-202ENST00000428962 LRRN4CLQ8ND94 238 aa15.27■□□□□ 0.03
THBS3-202ENST00000428962 GMCL1Q96IK5 515 aa15.27■□□□□ 0.03
THBS3-202ENST00000428962 SYT17Q9BSW7 474 aa15.27■□□□□ 0.03
THBS3-202ENST00000428962 NOC4LQ9BVI4 516 aaKnown RBP15.27■□□□□ 0.03
THBS3-202ENST00000428962 SLC39A2Q9NP94 309 aa15.27■□□□□ 0.03
THBS3-202ENST00000428962 KCNQ5Q9NR82 932 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms