RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 TKFCQ3LXA3 575 aa17.17■□□□□ 0.34
PDE6D-203ENST00000428104 BRDTQ58F21 947 aaPredicted RBP17.17■□□□□ 0.34
PDE6D-203ENST00000428104 RPAINQ86UA6 219 aa17.17■□□□□ 0.34
PDE6D-203ENST00000428104 NSUN3Q9H649 340 aaKnown RBP17.17■□□□□ 0.34
PDE6D-203ENST00000428104 MKNK2Q9HBH9 465 aa17.17■□□□□ 0.34
PDE6D-203ENST00000428104 INSL6Q9Y581 213 aa17.17■□□□□ 0.34
PDE6D-203ENST00000428104 RBM47A0AV96 593 aaKnown RBP17.16■□□□□ 0.34
PDE6D-203ENST00000428104 A6NJR5 290 aa17.16■□□□□ 0.34
PDE6D-203ENST00000428104 FDX1P10109 184 aa17.16■□□□□ 0.34
PDE6D-203ENST00000428104 DLX2Q07687 328 aaPredicted RBP17.16■□□□□ 0.34
PDE6D-203ENST00000428104 IKQ13123 557 aaPredicted RBP17.16■□□□□ 0.34
PDE6D-203ENST00000428104 GPM6BQ13491 265 aa17.16■□□□□ 0.34
PDE6D-203ENST00000428104 IKBKEQ14164 716 aa17.16■□□□□ 0.34
PDE6D-203ENST00000428104 SLFN13Q68D06 897 aa17.16■□□□□ 0.34
PDE6D-203ENST00000428104 GDF6Q6KF10 455 aaPredicted RBP17.16■□□□□ 0.34
PDE6D-203ENST00000428104 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.16■□□□□ 0.34
PDE6D-203ENST00000428104 FBXL6Q8N531 539 aa17.16■□□□□ 0.34
PDE6D-203ENST00000428104 TMEM57Q8N5G2 664 aa17.16■□□□□ 0.34
PDE6D-203ENST00000428104 FRAT1Q92837 279 aaPredicted RBP17.16■□□□□ 0.34
PDE6D-203ENST00000428104 ATOH1Q92858 354 aaPredicted RBP17.16■□□□□ 0.34
PDE6D-203ENST00000428104 COPS5Q92905 334 aa17.16■□□□□ 0.34
PDE6D-203ENST00000428104 CEP95Q96GE4 821 aa17.16■□□□□ 0.34
PDE6D-203ENST00000428104 IL1RAPL2Q9NP60 686 aa17.16■□□□□ 0.34
PDE6D-203ENST00000428104 EXOC6BQ9Y2D4 811 aa17.16■□□□□ 0.34
PDE6D-203ENST00000428104 WDR87Q6ZQQ6 2873 aa17.15■□□□□ 0.34
PDE6D-203ENST00000428104 H3BNC9 293 aa17.15■□□□□ 0.34
PDE6D-203ENST00000428104 MBTPS2O43462 519 aa17.15■□□□□ 0.34
PDE6D-203ENST00000428104 KPNA6O60684 536 aa17.15■□□□□ 0.34
PDE6D-203ENST00000428104 EFCAB14O75071 495 aa17.15■□□□□ 0.34
PDE6D-203ENST00000428104 CKBP12277 381 aa17.15■□□□□ 0.34
PDE6D-203ENST00000428104 STAT2P52630 851 aa17.15■□□□□ 0.34
PDE6D-203ENST00000428104 PKN1Q16512 942 aa17.15■□□□□ 0.34
PDE6D-203ENST00000428104 RPAP2Q8IXW5 612 aaPredicted RBP17.15■□□□□ 0.34
PDE6D-203ENST00000428104 GMCL1P1Q8NEA9 526 aa17.15■□□□□ 0.34
PDE6D-203ENST00000428104 MKL1Q969V6 931 aa17.15■□□□□ 0.34
PDE6D-203ENST00000428104 ARPP21Q9UBL0 812 aaPredicted RBP17.15■□□□□ 0.34
PDE6D-203ENST00000428104 RAD50Q92878 1312 aa17.15■□□□□ 0.34
PDE6D-203ENST00000428104 STXBP3O00186 592 aa17.14■□□□□ 0.33
PDE6D-203ENST00000428104 IPO8O15397 1037 aaKnown RBP17.14■□□□□ 0.33
PDE6D-203ENST00000428104 ALDH5A1P51649 535 aaPredicted RBP17.14■□□□□ 0.33
PDE6D-203ENST00000428104 VCPP55072 806 aaKnown RBP17.14■□□□□ 0.33
PDE6D-203ENST00000428104 HTRA4P83105 476 aaPredicted RBP17.14■□□□□ 0.33
PDE6D-203ENST00000428104 PPP2R5BQ15173 497 aa17.14■□□□□ 0.33
PDE6D-203ENST00000428104 MYOCDQ8IZQ8 938 aa17.14■□□□□ 0.33
PDE6D-203ENST00000428104 SP7Q8TDD2 431 aaPredicted RBP17.14■□□□□ 0.33
PDE6D-203ENST00000428104 MTMR4Q9NYA4 1195 aa17.14■□□□□ 0.33
PDE6D-203ENST00000428104 PARNO95453 639 aaKnown RBP17.13■□□□□ 0.33
PDE6D-203ENST00000428104 RBL2Q08999 1139 aa17.13■□□□□ 0.33
PDE6D-203ENST00000428104 CTC1Q2NKJ3 1217 aa17.13■□□□□ 0.33
PDE6D-203ENST00000428104 ASCL5Q7RTU5 278 aa17.13■□□□□ 0.33
PDE6D-203ENST00000428104 ERMP1Q7Z2K6 904 aa17.13■□□□□ 0.33
PDE6D-203ENST00000428104 SAMD11Q96NU1 681 aa17.13■□□□□ 0.33
PDE6D-203ENST00000428104 PRDM1O75626 825 aa17.12■□□□□ 0.33
PDE6D-203ENST00000428104 TTLL1O95922 423 aa17.12■□□□□ 0.33
PDE6D-203ENST00000428104 ZXDAP98168 799 aa17.12■□□□□ 0.33
PDE6D-203ENST00000428104 BAATQ14032 418 aaPredicted RBP17.12■□□□□ 0.33
PDE6D-203ENST00000428104 MBTPS1Q14703 1052 aa17.12■□□□□ 0.33
PDE6D-203ENST00000428104 FAM160B2Q86V87 743 aa17.12■□□□□ 0.33
PDE6D-203ENST00000428104 TMEM192Q8IY95 271 aa17.12■□□□□ 0.33
PDE6D-203ENST00000428104 CHURC1Q8WUH1 139 aa17.12■□□□□ 0.33
PDE6D-203ENST00000428104 STAG1Q8WVM7 1258 aa17.12■□□□□ 0.33
PDE6D-203ENST00000428104 PAG1Q9NWQ8 432 aa17.12■□□□□ 0.33
PDE6D-203ENST00000428104 ADD3Q9UEY8 706 aaKnown RBP17.12■□□□□ 0.33
PDE6D-203ENST00000428104 CCPG1Q9ULG6 757 aa17.12■□□□□ 0.33
PDE6D-203ENST00000428104 MINDY4BA8MYZ0 360 aa17.11■□□□□ 0.33
PDE6D-203ENST00000428104 H0Y858 1186 aa17.11■□□□□ 0.33
PDE6D-203ENST00000428104 TBX10O75333 385 aa17.11■□□□□ 0.33
PDE6D-203ENST00000428104 HYAL1Q12794 435 aa17.11■□□□□ 0.33
PDE6D-203ENST00000428104 SMAD4Q13485 552 aaKnown RBP17.11■□□□□ 0.33
PDE6D-203ENST00000428104 TRAF7Q6Q0C0 670 aa17.11■□□□□ 0.33
PDE6D-203ENST00000428104 FBXO11Q86XK2 927 aa17.11■□□□□ 0.33
PDE6D-203ENST00000428104 ERC1Q8IUD2 1116 aa17.11■□□□□ 0.33
PDE6D-203ENST00000428104 PUS7LQ9H0K6 701 aaKnown RBP17.11■□□□□ 0.33
PDE6D-203ENST00000428104 BCL11AQ9H165 835 aa17.11■□□□□ 0.33
PDE6D-203ENST00000428104 TLR9Q9NR96 1032 aa17.11■□□□□ 0.33
PDE6D-203ENST00000428104 SYNPO2Q9UMS6 1093 aa17.11■□□□□ 0.33
PDE6D-203ENST00000428104 LCTP09848 1927 aa17.11■□□□□ 0.33
PDE6D-203ENST00000428104 RIF1Q5UIP0 2472 aaKnown RBP17.11■□□□□ 0.33
PDE6D-203ENST00000428104 NFIBO00712 420 aa17.1■□□□□ 0.33
PDE6D-203ENST00000428104 NKRFO15226 690 aaKnown RBP eCLIP17.1■□□□□ 0.333e-6■■■□□ 15.6
PDE6D-203ENST00000428104 NCK2O43639 380 aa17.1■□□□□ 0.33
PDE6D-203ENST00000428104 LGR5O75473 907 aa17.1■□□□□ 0.33
PDE6D-203ENST00000428104 AMHP03971 560 aa17.1■□□□□ 0.33
PDE6D-203ENST00000428104 MCCP23508 829 aa17.1■□□□□ 0.33
PDE6D-203ENST00000428104 MKRN4PQ13434 485 aaPredicted RBP17.1■□□□□ 0.33
PDE6D-203ENST00000428104 SBK1Q52WX2 424 aa17.1■□□□□ 0.33
PDE6D-203ENST00000428104 ZNF618Q5T7W0 954 aa17.1■□□□□ 0.33
PDE6D-203ENST00000428104 KCTD1Q719H9 257 aa17.1■□□□□ 0.33
PDE6D-203ENST00000428104 SESTD1Q86VW0 696 aa17.1■□□□□ 0.33
PDE6D-203ENST00000428104 SCFD2Q8WU76 684 aa17.1■□□□□ 0.33
PDE6D-203ENST00000428104 KAT2BQ92831 832 aa17.1■□□□□ 0.33
PDE6D-203ENST00000428104 WNT8BQ93098 351 aa17.1■□□□□ 0.33
PDE6D-203ENST00000428104 YME1L1Q96TA2 773 aa17.1■□□□□ 0.33
PDE6D-203ENST00000428104 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.1■□□□□ 0.33
PDE6D-203ENST00000428104 TRIP12Q14669 1992 aaPredicted RBP17.09■□□□□ 0.33
PDE6D-203ENST00000428104 TXNP10599 105 aaKnown RBP17.09■□□□□ 0.33
PDE6D-203ENST00000428104 GTF2F1P35269 517 aaKnown RBP eCLIP17.09■□□□□ 0.338e-7■■■■□ 24.7
PDE6D-203ENST00000428104 SLC1A4P43007 532 aa17.09■□□□□ 0.33
PDE6D-203ENST00000428104 PDE4DQ08499 809 aa17.09■□□□□ 0.33
PDE6D-203ENST00000428104 RASGRP2Q7LDG7 609 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms