RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 COL9A3Q14050 684 aaPredicted RBP21.39■■□□□ 1.01
PSPC1-202ENST00000427943 SLC43A3Q8NBI5 491 aa21.39■■□□□ 1.01
PSPC1-202ENST00000427943 IGDCC4Q8TDY8 1250 aa21.39■■□□□ 1.01
PSPC1-202ENST00000427943 PIGSQ96S52 555 aa21.39■■□□□ 1.01
PSPC1-202ENST00000427943 RMDN3Q96TC7 470 aa21.39■■□□□ 1.01
PSPC1-202ENST00000427943 ANO2Q9NQ90 1003 aa21.39■■□□□ 1.01
PSPC1-202ENST00000427943 SLC27A2O14975 620 aa21.38■■□□□ 1.01
PSPC1-202ENST00000427943 CYTH3O43739 400 aa21.38■■□□□ 1.01
PSPC1-202ENST00000427943 CD4P01730 458 aa21.38■■□□□ 1.01
PSPC1-202ENST00000427943 MYL3P08590 195 aa21.38■■□□□ 1.01
PSPC1-202ENST00000427943 TXNP10599 105 aaKnown RBP21.38■■□□□ 1.01
PSPC1-202ENST00000427943 EIF2AK2P19525 551 aaKnown RBP21.38■■□□□ 1.01
PSPC1-202ENST00000427943 CPT1AP50416 773 aa21.38■■□□□ 1.01
PSPC1-202ENST00000427943 BMP2KLQ5H9B9 411 aa21.38■■□□□ 1.01
PSPC1-202ENST00000427943 CATIPQ7Z7H3 387 aa21.38■■□□□ 1.01
PSPC1-202ENST00000427943 NSUN6Q8TEA1 469 aaKnown RBP21.38■■□□□ 1.01
PSPC1-202ENST00000427943 RNPC3Q96LT9 517 aaKnown RBP21.38■■□□□ 1.01
PSPC1-202ENST00000427943 MYL10Q9BUA6 226 aa21.38■■□□□ 1.01
PSPC1-202ENST00000427943 MAF1Q9H063 256 aa21.38■■□□□ 1.01
PSPC1-202ENST00000427943 RIOX1Q9H6W3 641 aa21.38■■□□□ 1.01
PSPC1-202ENST00000427943 LY9Q9HBG7 655 aa21.38■■□□□ 1.01
PSPC1-202ENST00000427943 PCDHA1Q9Y5I3 950 aa21.38■■□□□ 1.01
PSPC1-202ENST00000427943 NKRFO15226 690 aaKnown RBP eCLIP21.37■■□□□ 1.01
PSPC1-202ENST00000427943 PRC1O43663 620 aa21.37■■□□□ 1.01
PSPC1-202ENST00000427943 PURAQ00577 322 aaKnown RBP21.37■■□□□ 1.01
PSPC1-202ENST00000427943 TTLL4Q14679 1199 aa21.37■■□□□ 1.01
PSPC1-202ENST00000427943 ARHGEF16Q5VV41 709 aa21.37■■□□□ 1.01
PSPC1-202ENST00000427943 CREB3L3Q68CJ9 461 aa21.37■■□□□ 1.01
PSPC1-202ENST00000427943 SEPT14Q6ZU15 432 aa21.37■■□□□ 1.01
PSPC1-202ENST00000427943 PIBF1Q8WXW3 757 aa21.37■■□□□ 1.01
PSPC1-202ENST00000427943 POLR3EQ9NVU0 708 aa21.37■■□□□ 1.01
PSPC1-202ENST00000427943 B4GALT4O60513 344 aa21.36■■□□□ 1.01
PSPC1-202ENST00000427943 HOXA13P31271 388 aaPredicted RBP21.36■■□□□ 1.01
PSPC1-202ENST00000427943 HSD17B4P51659 736 aa21.36■■□□□ 1.01
PSPC1-202ENST00000427943 MFSD5Q6N075 450 aa21.36■■□□□ 1.01
PSPC1-202ENST00000427943 CASC1Q6TDU7 716 aa21.36■■□□□ 1.01
PSPC1-202ENST00000427943 ZNF654Q8IZM8 581 aa21.36■■□□□ 1.01
PSPC1-202ENST00000427943 PPP1R13LQ8WUF5 828 aa21.36■■□□□ 1.01
PSPC1-202ENST00000427943 TRPV6Q9H1D0 765 aa21.36■■□□□ 1.01
PSPC1-202ENST00000427943 PXMP2Q9NR77 195 aa21.36■■□□□ 1.01
PSPC1-202ENST00000427943 GBF1Q92538 1859 aa21.36■■□□□ 1.01
PSPC1-202ENST00000427943 DOCK5Q9H7D0 1870 aa21.36■■□□□ 1.01
PSPC1-202ENST00000427943 SCN5AQ14524 2016 aa21.36■■□□□ 1.01
PSPC1-202ENST00000427943 UMODL1Q5DID0 1318 aa21.35■■□□□ 1.01
PSPC1-202ENST00000427943 TANC1Q9C0D5 1861 aa21.35■■□□□ 1.01
PSPC1-202ENST00000427943 CSF2RAP15509 400 aa21.35■■□□□ 1.01
PSPC1-202ENST00000427943 CYP2C18P33260 490 aa21.35■■□□□ 1.01
PSPC1-202ENST00000427943 STXBP2Q15833 593 aa21.35■■□□□ 1.01
PSPC1-202ENST00000427943 FAM161BQ96MY7 647 aa21.35■■□□□ 1.01
PSPC1-202ENST00000427943 IWS1Q96ST2 819 aa21.35■■□□□ 1.01
PSPC1-202ENST00000427943 MTMR10Q9NXD2 777 aa21.35■■□□□ 1.01
PSPC1-202ENST00000427943 COL6A3P12111 3177 aa21.34■■□□□ 1.01
PSPC1-202ENST00000427943 SH2B2O14492 632 aaPredicted RBP21.34■■□□□ 1.01
PSPC1-202ENST00000427943 MCM5P33992 734 aa21.34■■□□□ 1.01
PSPC1-202ENST00000427943 GHRHRQ02643 423 aa21.34■■□□□ 1.01
PSPC1-202ENST00000427943 NECTIN1Q15223 517 aa21.34■■□□□ 1.01
PSPC1-202ENST00000427943 LY6KQ17RY6 165 aa21.34■■□□□ 1.01
PSPC1-202ENST00000427943 BRDTQ58F21 947 aaPredicted RBP21.34■■□□□ 1.01
PSPC1-202ENST00000427943 CCDC62Q6P9F0 684 aa21.34■■□□□ 1.01
PSPC1-202ENST00000427943 NFXL1Q6ZNB6 911 aa21.34■■□□□ 1.01
PSPC1-202ENST00000427943 CTCFLQ8NI51 663 aaPredicted RBP21.34■■□□□ 1.01
PSPC1-202ENST00000427943 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.34■■□□□ 1.01
PSPC1-202ENST00000427943 MTG1Q9BT17 334 aaPredicted RBP21.34■■□□□ 1.01
PSPC1-202ENST00000427943 HIPK3Q9H422 1215 aa21.34■■□□□ 1.01
PSPC1-202ENST00000427943 PNMA6FA0A0J9YX94 578 aa21.33■■□□□ 1.01
PSPC1-202ENST00000427943 DDAH1O94760 285 aa21.33■■□□□ 1.01
PSPC1-202ENST00000427943 NR3C2P08235 984 aa21.33■■□□□ 1.01
PSPC1-202ENST00000427943 PPIGQ13427 754 aaKnown RBP eCLIP21.33■■□□□ 1.012e-9■■■■□ 19.4
PSPC1-202ENST00000427943 RAB11FIP4Q86YS3 637 aa21.33■■□□□ 1.01
PSPC1-202ENST00000427943 TMEM199Q8N511 208 aa21.33■■□□□ 1.01
PSPC1-202ENST00000427943 LRRC2Q9BYS8 371 aa21.33■■□□□ 1.01
PSPC1-202ENST00000427943 ALDH8A1Q9H2A2 487 aaPredicted RBP21.33■■□□□ 1.01
PSPC1-202ENST00000427943 CCDC69A6NI79 296 aa21.32■■□□□ 1
PSPC1-202ENST00000427943 A6NJR5 290 aa21.32■■□□□ 1
PSPC1-202ENST00000427943 GH1P01241 217 aa21.32■■□□□ 1
PSPC1-202ENST00000427943 ACRP10323 421 aa21.32■■□□□ 1
PSPC1-202ENST00000427943 MYCLP12524 364 aaPredicted RBP21.32■■□□□ 1
PSPC1-202ENST00000427943 RXRAP19793 462 aa21.32■■□□□ 1
PSPC1-202ENST00000427943 FAM47CQ5HY64 1035 aa21.32■■□□□ 1
PSPC1-202ENST00000427943 ZNF697Q5TEC3 545 aa21.32■■□□□ 1
PSPC1-202ENST00000427943 IL31RAQ8NI17 732 aa21.32■■□□□ 1
PSPC1-202ENST00000427943 TMEM87BQ96K49 555 aa21.32■■□□□ 1
PSPC1-202ENST00000427943 PDCD2LQ9BRP1 358 aa21.32■■□□□ 1
PSPC1-202ENST00000427943 SEZ6LQ9BYH1 1024 aa21.32■■□□□ 1
PSPC1-202ENST00000427943 TRMT13Q9NUP7 481 aaKnown RBP21.32■■□□□ 1
PSPC1-202ENST00000427943 TRIP12Q14669 1992 aaPredicted RBP21.32■■□□□ 1
PSPC1-202ENST00000427943 PLEKHA8P1O95397 391 aa21.31■■□□□ 1
PSPC1-202ENST00000427943 KIF5BP33176 963 aa21.31■■□□□ 1
PSPC1-202ENST00000427943 CCL23P55773 120 aa21.31■■□□□ 1
PSPC1-202ENST00000427943 CHMP4BP1P59074 171 aa21.31■■□□□ 1
PSPC1-202ENST00000427943 ARHGAP1Q07960 439 aa21.31■■□□□ 1
PSPC1-202ENST00000427943 TRAF1Q13077 416 aa21.31■■□□□ 1
PSPC1-202ENST00000427943 NBPF20Q3BBV1 942 aa21.31■■□□□ 1
PSPC1-202ENST00000427943 C16orf59Q7L2K0 433 aa21.31■■□□□ 1
PSPC1-202ENST00000427943 FCHSD1Q86WN1 690 aa21.31■■□□□ 1
PSPC1-202ENST00000427943 AFG1LQ8WV93 481 aa21.31■■□□□ 1
PSPC1-202ENST00000427943 MTA3Q9BTC8 594 aa21.31■■□□□ 1
PSPC1-202ENST00000427943 NOC4LQ9BVI4 516 aaKnown RBP21.31■■□□□ 1
PSPC1-202ENST00000427943 MAP3K20Q9NYL2 800 aaKnown RBP21.31■■□□□ 1
PSPC1-202ENST00000427943 GCOM1H8Y6P7 765 aaPredicted RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms