RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 MCTP2Q6DN12 878 aa20.36■□□□□ 0.85
AC055811.2-201ENST00000427497 ELOA2Q8IYF1 753 aaPredicted RBP20.36■□□□□ 0.85
AC055811.2-201ENST00000427497 SMCHD1A6NHR9 2005 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 USP17L15C9J2P7 530 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 USP17L13C9JLJ4 530 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 USP17L11C9JVI0 530 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 USP17L18D6R9N7 530 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 USP17L22D6RA61 530 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 USP17L17D6RBQ6 530 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 USP17L19D6RCP7 530 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 USP17L20D6RJB6 530 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 CCNT1O60563 726 aaKnown RBP20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 TLR2O60603 784 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 USP17L24Q0WX57 530 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 AP3B2Q13367 1082 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 USP17L6PQ6QN14 398 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 KRBA2Q6ZNG9 492 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 EFCC1Q9HA90 598 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 PARP14Q460N5 1801 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 VCAM1P19320 739 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 LONP1P36776 959 aaKnown RBP20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 LONRF3Q496Y0 759 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 SASS6Q6UVJ0 657 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 ANKRD23Q86SG2 305 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 PRPF38AQ8NAV1 312 aaKnown RBP20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 SYMPKQ92797 1274 aaKnown RBP20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 EPSTI1Q96J88 318 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 C12orf42Q96LP6 360 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 SLF1Q9BQI6 1058 aa20.35■□□□□ 0.85
AC055811.2-201ENST00000427497 CXCL11O14625 94 aa20.34■□□□□ 0.85
AC055811.2-201ENST00000427497 NEMFO60524 1076 aa20.34■□□□□ 0.85
AC055811.2-201ENST00000427497 MOGSQ13724 837 aa20.34■□□□□ 0.85
AC055811.2-201ENST00000427497 PPP4R3AQ6IN85 833 aa20.34■□□□□ 0.85
AC055811.2-201ENST00000427497 KIAA1468Q9P260 1216 aa20.34■□□□□ 0.85
AC055811.2-201ENST00000427497 PTPN22Q9Y2R2 807 aa20.34■□□□□ 0.85
AC055811.2-201ENST00000427497 ZHX2Q9Y6X8 837 aa20.34■□□□□ 0.85
AC055811.2-201ENST00000427497 PTPRFP10586 1907 aa20.34■□□□□ 0.85
AC055811.2-201ENST00000427497 C19orf81C9J6K1 198 aa20.33■□□□□ 0.85
AC055811.2-201ENST00000427497 PIK3CDO00329 1044 aa20.33■□□□□ 0.85
AC055811.2-201ENST00000427497 POLR2DO15514 142 aaKnown RBP20.33■□□□□ 0.85
AC055811.2-201ENST00000427497 OR52Z1P0C646 297 aa20.33■□□□□ 0.85
AC055811.2-201ENST00000427497 TAL1P17542 331 aaPredicted RBP20.33■□□□□ 0.85
AC055811.2-201ENST00000427497 DTHD1Q6ZMT9 781 aa20.33■□□□□ 0.85
AC055811.2-201ENST00000427497 PANK2Q9BZ23 570 aa20.33■□□□□ 0.85
AC055811.2-201ENST00000427497 A0A087X0B3 334 aa20.32■□□□□ 0.84
AC055811.2-201ENST00000427497 FOSP01100 380 aaPredicted RBP20.32■□□□□ 0.84
AC055811.2-201ENST00000427497 CCDC174Q6PII3 467 aa20.32■□□□□ 0.84
AC055811.2-201ENST00000427497 RNF214Q8ND24 703 aa20.32■□□□□ 0.84
AC055811.2-201ENST00000427497 CRYGNQ8WXF5 182 aa20.32■□□□□ 0.84
AC055811.2-201ENST00000427497 P2RX7Q99572 595 aaKnown RBP20.32■□□□□ 0.84
AC055811.2-201ENST00000427497 ANO3Q9BYT9 981 aa20.32■□□□□ 0.84
AC055811.2-201ENST00000427497 ZSWIM8A7E2V4 1837 aa20.32■□□□□ 0.84
AC055811.2-201ENST00000427497 ZNF536O15090 1300 aa20.32■□□□□ 0.84
AC055811.2-201ENST00000427497 PDHXO00330 501 aa20.32■□□□□ 0.84
AC055811.2-201ENST00000427497 ACTN4O43707 911 aaKnown RBP20.32■□□□□ 0.84
AC055811.2-201ENST00000427497 MDM2Q00987 491 aaPredicted RBP20.32■□□□□ 0.84
AC055811.2-201ENST00000427497 CNNM3Q8NE01 707 aa20.32■□□□□ 0.84
AC055811.2-201ENST00000427497 MTMR9Q96QG7 549 aa20.32■□□□□ 0.84
AC055811.2-201ENST00000427497 NAP1L4Q99733 375 aaKnown RBP20.32■□□□□ 0.84
AC055811.2-201ENST00000427497 RPAP3Q9H6T3 665 aaPredicted RBP20.32■□□□□ 0.84
AC055811.2-201ENST00000427497 PPP1R9AQ9ULJ8 1098 aa20.32■□□□□ 0.84
AC055811.2-201ENST00000427497 AFG3L2Q9Y4W6 797 aa20.32■□□□□ 0.84
AC055811.2-201ENST00000427497 RLFQ13129 1914 aa20.31■□□□□ 0.84
AC055811.2-201ENST00000427497 ABCB11O95342 1321 aa20.31■□□□□ 0.84
AC055811.2-201ENST00000427497 TDP2O95551 362 aa20.31■□□□□ 0.84
AC055811.2-201ENST00000427497 ICAM1P05362 532 aa20.31■□□□□ 0.84
AC055811.2-201ENST00000427497 GCFC2P16383 781 aaKnown RBP20.31■□□□□ 0.84
AC055811.2-201ENST00000427497 USP11P51784 963 aa20.31■□□□□ 0.84
AC055811.2-201ENST00000427497 ARHGEF6Q15052 776 aa20.31■□□□□ 0.84
AC055811.2-201ENST00000427497 POTEDQ86YR6 584 aa20.31■□□□□ 0.84
AC055811.2-201ENST00000427497 TANGO6Q9C0B7 1094 aa20.31■□□□□ 0.84
AC055811.2-201ENST00000427497 SERTAD1Q9UHV2 236 aa20.31■□□□□ 0.84
AC055811.2-201ENST00000427497 MRPL11Q9Y3B7 192 aaKnown RBP20.31■□□□□ 0.84
AC055811.2-201ENST00000427497 A0A0G2JLL6 359 aaPredicted RBP20.3■□□□□ 0.84
AC055811.2-201ENST00000427497 SLC37A4O43826 429 aa20.3■□□□□ 0.84
AC055811.2-201ENST00000427497 STX1AQ16623 288 aa20.3■□□□□ 0.84
AC055811.2-201ENST00000427497 UVSSAQ2YD98 709 aa20.3■□□□□ 0.84
AC055811.2-201ENST00000427497 ANO6Q4KMQ2 910 aa20.3■□□□□ 0.84
AC055811.2-201ENST00000427497 C17orf99Q6UX52 265 aa20.3■□□□□ 0.84
AC055811.2-201ENST00000427497 PRRT2Q7Z6L0 340 aaPredicted RBP20.3■□□□□ 0.84
AC055811.2-201ENST00000427497 ERCC4Q92889 916 aaPredicted RBP20.3■□□□□ 0.84
AC055811.2-201ENST00000427497 SLC38A10Q9HBR0 1119 aa20.3■□□□□ 0.84
AC055811.2-201ENST00000427497 USP25Q9UHP3 1055 aa20.3■□□□□ 0.84
AC055811.2-201ENST00000427497 TUBE1Q9UJT0 475 aa20.3■□□□□ 0.84
AC055811.2-201ENST00000427497 CYP3A7-CYP3A51PA0A087WV96 503 aa20.29■□□□□ 0.84
AC055811.2-201ENST00000427497 FLOT1O75955 427 aa20.29■□□□□ 0.84
AC055811.2-201ENST00000427497 CAVIN2O95810 425 aa20.29■□□□□ 0.84
AC055811.2-201ENST00000427497 FDX1P10109 184 aa20.29■□□□□ 0.84
AC055811.2-201ENST00000427497 CYP3A7P24462 503 aa20.29■□□□□ 0.84
AC055811.2-201ENST00000427497 HMGCS2P54868 508 aa20.29■□□□□ 0.84
AC055811.2-201ENST00000427497 LACTBP83111 547 aaPredicted RBP20.29■□□□□ 0.84
AC055811.2-201ENST00000427497 SH3D19Q5HYK7 790 aa20.29■□□□□ 0.84
AC055811.2-201ENST00000427497 GPAT2Q6NUI2 795 aa20.29■□□□□ 0.84
AC055811.2-201ENST00000427497 KANK3Q6NY19 840 aa20.29■□□□□ 0.84
AC055811.2-201ENST00000427497 MOXD1Q6UVY6 613 aa20.29■□□□□ 0.84
AC055811.2-201ENST00000427497 PDILTQ8N807 584 aa20.29■□□□□ 0.84
AC055811.2-201ENST00000427497 FAM200AQ8TCP9 573 aa20.29■□□□□ 0.84
AC055811.2-201ENST00000427497 AK8Q96MA6 479 aa20.29■□□□□ 0.84
AC055811.2-201ENST00000427497 MBOAT7Q96N66 472 aa20.29■□□□□ 0.84
AC055811.2-201ENST00000427497 PYM1Q9BRP8 204 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms