RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 CDKAL1Q5VV42 579 aa24.44■■□□□ 1.5
CNEP1R1-202ENST00000427478 KRT79Q5XKE5 535 aa24.44■■□□□ 1.5
CNEP1R1-202ENST00000427478 TEPSINQ96N21 525 aa24.44■■□□□ 1.5
CNEP1R1-202ENST00000427478 NUDT12Q9BQG2 462 aa24.44■■□□□ 1.5
CNEP1R1-202ENST00000427478 SPDYE3A6NKU9 549 aa24.44■■□□□ 1.5
CNEP1R1-202ENST00000427478 MMP14P50281 582 aa24.44■■□□□ 1.5
CNEP1R1-202ENST00000427478 ARHGAP4P98171 946 aa24.44■■□□□ 1.5
CNEP1R1-202ENST00000427478 CCDC174Q6PII3 467 aa24.44■■□□□ 1.5
CNEP1R1-202ENST00000427478 NLGN2Q8NFZ4 835 aa24.44■■□□□ 1.5
CNEP1R1-202ENST00000427478 BLOC1S4Q9NUP1 217 aa24.44■■□□□ 1.5
CNEP1R1-202ENST00000427478 RHOBTB3O94955 611 aa24.43■■□□□ 1.5
CNEP1R1-202ENST00000427478 HOXA13P31271 388 aaPredicted RBP24.43■■□□□ 1.5
CNEP1R1-202ENST00000427478 ASIC1P78348 528 aa24.43■■□□□ 1.5
CNEP1R1-202ENST00000427478 MCTP2Q6DN12 878 aa24.43■■□□□ 1.5
CNEP1R1-202ENST00000427478 SAMD1Q6SPF0 538 aaPredicted RBP24.43■■□□□ 1.5
CNEP1R1-202ENST00000427478 C7orf25Q9BPX7 421 aa24.43■■□□□ 1.5
CNEP1R1-202ENST00000427478 STK17AQ9UEE5 414 aa24.43■■□□□ 1.5
CNEP1R1-202ENST00000427478 CNOT7Q9UIV1 285 aaKnown RBP24.43■■□□□ 1.5
CNEP1R1-202ENST00000427478 PCDHA12Q9UN75 941 aa24.43■■□□□ 1.5
CNEP1R1-202ENST00000427478 PHF20L1A8MW92 1017 aa24.43■■□□□ 1.5
CNEP1R1-202ENST00000427478 FZD9O00144 591 aa24.43■■□□□ 1.5
CNEP1R1-202ENST00000427478 CRYGNQ8WXF5 182 aa24.43■■□□□ 1.5
CNEP1R1-202ENST00000427478 CYP3A7-CYP3A51PA0A087WV96 503 aa24.42■■□□□ 1.5
CNEP1R1-202ENST00000427478 CYP3A7P24462 503 aa24.42■■□□□ 1.5
CNEP1R1-202ENST00000427478 AMPD3Q01432 767 aa24.42■■□□□ 1.5
CNEP1R1-202ENST00000427478 ADSSL1Q8N142 457 aa24.42■■□□□ 1.5
CNEP1R1-202ENST00000427478 CHURC1Q8WUH1 139 aa24.42■■□□□ 1.5
CNEP1R1-202ENST00000427478 FEZ1Q99689 392 aa24.42■■□□□ 1.5
CNEP1R1-202ENST00000427478 ZNF341Q9BYN7 854 aa24.42■■□□□ 1.5
CNEP1R1-202ENST00000427478 RANBP17Q9H2T7 1088 aaKnown RBP24.42■■□□□ 1.5
CNEP1R1-202ENST00000427478 MCM6Q14566 821 aa24.41■■□□□ 1.5
CNEP1R1-202ENST00000427478 SV2BQ7L1I2 683 aa24.41■■□□□ 1.5
CNEP1R1-202ENST00000427478 APTXQ7Z2E3 356 aaKnown RBP24.41■■□□□ 1.5
CNEP1R1-202ENST00000427478 LARP4BQ92615 738 aaKnown RBP24.41■■□□□ 1.5
CNEP1R1-202ENST00000427478 MBOAT7Q96N66 472 aa24.41■■□□□ 1.5
CNEP1R1-202ENST00000427478 KCNMB3Q9NPA1 279 aa24.41■■□□□ 1.5
CNEP1R1-202ENST00000427478 HACL1Q9UJ83 578 aa24.41■■□□□ 1.5
CNEP1R1-202ENST00000427478 A0A1B0GTH6 734 aa24.41■■□□□ 1.5
CNEP1R1-202ENST00000427478 FOSP01100 380 aaPredicted RBP24.41■■□□□ 1.5
CNEP1R1-202ENST00000427478 MOXD1Q6UVY6 613 aa24.41■■□□□ 1.5
CNEP1R1-202ENST00000427478 GIMAP8Q8ND71 665 aaPredicted RBP24.41■■□□□ 1.5
CNEP1R1-202ENST00000427478 CCDC47Q96A33 483 aaKnown RBP24.41■■□□□ 1.5
CNEP1R1-202ENST00000427478 EXOC1Q9NV70 894 aa24.41■■□□□ 1.5
CNEP1R1-202ENST00000427478 FBXO28Q9NVF7 368 aa24.41■■□□□ 1.5
CNEP1R1-202ENST00000427478 ZNF541Q9H0D2 1346 aa24.4■■□□□ 1.5
CNEP1R1-202ENST00000427478 SREBF1P36956 1147 aa24.4■■□□□ 1.5
CNEP1R1-202ENST00000427478 PDE4DQ08499 809 aa24.4■■□□□ 1.5
CNEP1R1-202ENST00000427478 NR1I3Q14994 352 aa24.4■■□□□ 1.5
CNEP1R1-202ENST00000427478 TMEM119Q4V9L6 283 aa24.4■■□□□ 1.5
CNEP1R1-202ENST00000427478 SEMA3FQ13275 785 aa24.4■■□□□ 1.5
CNEP1R1-202ENST00000427478 ECM1Q16610 540 aa24.4■■□□□ 1.5
CNEP1R1-202ENST00000427478 KIF4BQ2VIQ3 1234 aa24.4■■□□□ 1.5
CNEP1R1-202ENST00000427478 PRR16Q569H4 304 aa24.4■■□□□ 1.5
CNEP1R1-202ENST00000427478 FAM160B2Q86V87 743 aa24.4■■□□□ 1.5
CNEP1R1-202ENST00000427478 RAD54LQ92698 747 aa24.4■■□□□ 1.5
CNEP1R1-202ENST00000427478 TRIM49BA6NDI0 452 aa24.39■■□□□ 1.49
CNEP1R1-202ENST00000427478 GOLGA8FQ08AF8 430 aa24.39■■□□□ 1.49
CNEP1R1-202ENST00000427478 GOLGA8DPQ0D2H9 430 aa24.39■■□□□ 1.49
CNEP1R1-202ENST00000427478 TRAF1Q13077 416 aa24.39■■□□□ 1.49
CNEP1R1-202ENST00000427478 STIM1Q13586 685 aa24.39■■□□□ 1.49
CNEP1R1-202ENST00000427478 KCNK18Q7Z418 384 aa24.39■■□□□ 1.49
CNEP1R1-202ENST00000427478 FEM1BQ9UK73 627 aa24.39■■□□□ 1.49
CNEP1R1-202ENST00000427478 PIK3CDO00329 1044 aa24.38■■□□□ 1.49
CNEP1R1-202ENST00000427478 PLA2G6O60733 806 aa24.38■■□□□ 1.49
CNEP1R1-202ENST00000427478 SPECC1LQ69YQ0 1117 aa24.38■■□□□ 1.49
CNEP1R1-202ENST00000427478 FCHSD1Q86WN1 690 aa24.38■■□□□ 1.49
CNEP1R1-202ENST00000427478 MYMKA6NI61 221 aa24.38■■□□□ 1.49
CNEP1R1-202ENST00000427478 CFBP00751 764 aa24.38■■□□□ 1.49
CNEP1R1-202ENST00000427478 CTAGE1Q96RT6 745 aa24.38■■□□□ 1.49
CNEP1R1-202ENST00000427478 DEFB129Q9H1M3 183 aa24.38■■□□□ 1.49
CNEP1R1-202ENST00000427478 ADD3Q9UEY8 706 aaKnown RBP24.38■■□□□ 1.49
CNEP1R1-202ENST00000427478 USP27XA6NNY8 438 aa24.37■■□□□ 1.49
CNEP1R1-202ENST00000427478 FAM86B1E9PN63 330 aa24.37■■□□□ 1.49
CNEP1R1-202ENST00000427478 TEX33O43247 280 aa24.37■■□□□ 1.49
CNEP1R1-202ENST00000427478 FAM86B2P0C5J1 330 aa24.37■■□□□ 1.49
CNEP1R1-202ENST00000427478 CCT6AP40227 531 aaKnown RBP24.37■■□□□ 1.49
CNEP1R1-202ENST00000427478 PMS1P54277 932 aaKnown RBP24.37■■□□□ 1.49
CNEP1R1-202ENST00000427478 SLFN12Q8IYM2 578 aa24.37■■□□□ 1.49
CNEP1R1-202ENST00000427478 ETNPPLQ8TBG4 499 aa24.37■■□□□ 1.49
CNEP1R1-202ENST00000427478 PSMA7O14818 248 aa24.37■■□□□ 1.49
CNEP1R1-202ENST00000427478 FCER1AP12319 257 aa24.37■■□□□ 1.49
CNEP1R1-202ENST00000427478 TBX2Q13207 712 aaPredicted RBP24.37■■□□□ 1.49
CNEP1R1-202ENST00000427478 Q4G0T1 1027 aa24.37■■□□□ 1.49
CNEP1R1-202ENST00000427478 TBC1D5Q92609 795 aa24.37■■□□□ 1.49
CNEP1R1-202ENST00000427478 LENG9Q96B70 501 aa24.37■■□□□ 1.49
CNEP1R1-202ENST00000427478 C16orf45Q96MC5 204 aaPredicted RBP24.37■■□□□ 1.49
CNEP1R1-202ENST00000427478 KDM3AQ9Y4C1 1321 aa24.36■■□□□ 1.49
CNEP1R1-202ENST00000427478 DOCK1Q14185 1865 aa24.36■■□□□ 1.49
CNEP1R1-202ENST00000427478 NRDCO43847 1150 aa24.36■■□□□ 1.49
CNEP1R1-202ENST00000427478 STAT3P40763 770 aa24.36■■□□□ 1.49
CNEP1R1-202ENST00000427478 STK4Q13043 487 aa24.36■■□□□ 1.49
CNEP1R1-202ENST00000427478 DYMQ7RTS9 669 aa24.36■■□□□ 1.49
CNEP1R1-202ENST00000427478 KRT31Q15323 416 aa24.35■■□□□ 1.49
CNEP1R1-202ENST00000427478 FILIP1LQ4L180 1135 aa24.35■■□□□ 1.49
CNEP1R1-202ENST00000427478 NBPF12Q5TAG4 269 aaPredicted RBP24.35■■□□□ 1.49
CNEP1R1-202ENST00000427478 HPS3Q969F9 1004 aa24.35■■□□□ 1.49
CNEP1R1-202ENST00000427478 KCNJ18B7U540 433 aa24.35■■□□□ 1.49
CNEP1R1-202ENST00000427478 INPP5BP32019 993 aa24.35■■□□□ 1.49
CNEP1R1-202ENST00000427478 KCNJ12Q14500 433 aa24.35■■□□□ 1.49
CNEP1R1-202ENST00000427478 CREBRFQ8IUR6 639 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms