RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 PCDHA1Q9Y5I3 950 aa11.82□□□□□ -0.52
COMMD1-202ENST00000427417 TXNP10599 105 aaKnown RBP11.81□□□□□ -0.52
COMMD1-202ENST00000427417 KIF5BP33176 963 aa11.81□□□□□ -0.52
COMMD1-202ENST00000427417 TROAPQ12815 778 aa11.81□□□□□ -0.52
COMMD1-202ENST00000427417 RNF20Q5VTR2 975 aa11.81□□□□□ -0.52
COMMD1-202ENST00000427417 ARHGEF16Q5VV41 709 aa11.81□□□□□ -0.52
COMMD1-202ENST00000427417 MFSD5Q6N075 450 aa11.81□□□□□ -0.52
COMMD1-202ENST00000427417 STOX1Q6ZVD7 989 aa11.81□□□□□ -0.52
COMMD1-202ENST00000427417 CHST3Q7LGC8 479 aa11.81□□□□□ -0.52
COMMD1-202ENST00000427417 HOMER1Q86YM7 354 aa11.81□□□□□ -0.52
COMMD1-202ENST00000427417 TMEM199Q8N511 208 aa11.81□□□□□ -0.52
COMMD1-202ENST00000427417 CTCFLQ8NI51 663 aaPredicted RBP11.81□□□□□ -0.52
COMMD1-202ENST00000427417 IGDCC4Q8TDY8 1250 aa11.81□□□□□ -0.52
COMMD1-202ENST00000427417 TMEM87BQ96K49 555 aa11.81□□□□□ -0.52
COMMD1-202ENST00000427417 TAAR1Q96RJ0 339 aa11.81□□□□□ -0.52
COMMD1-202ENST00000427417 LSG1Q9H089 658 aaKnown RBP11.81□□□□□ -0.52
COMMD1-202ENST00000427417 RIOX1Q9H6W3 641 aa11.81□□□□□ -0.52
COMMD1-202ENST00000427417 TAF6LQ9Y6J9 622 aa11.81□□□□□ -0.52
COMMD1-202ENST00000427417 COL6A3P12111 3177 aa11.8□□□□□ -0.52
COMMD1-202ENST00000427417 PNMA6FA0A0J9YX94 578 aa11.8□□□□□ -0.52
COMMD1-202ENST00000427417 PRC1O43663 620 aa11.8□□□□□ -0.52
COMMD1-202ENST00000427417 EIF3JO75822 258 aaKnown RBP11.8□□□□□ -0.52
COMMD1-202ENST00000427417 DDAH1O94760 285 aa11.8□□□□□ -0.52
COMMD1-202ENST00000427417 CD4P01730 458 aa11.8□□□□□ -0.52
COMMD1-202ENST00000427417 CALM1P0DP23 149 aa11.8□□□□□ -0.52
COMMD1-202ENST00000427417 CALM2P0DP24 149 aa11.8□□□□□ -0.52
COMMD1-202ENST00000427417 CALM3P0DP25 149 aa11.8□□□□□ -0.52
COMMD1-202ENST00000427417 HSD17B4P51659 736 aa11.8□□□□□ -0.52
COMMD1-202ENST00000427417 ANTXR2P58335 489 aa11.8□□□□□ -0.52
COMMD1-202ENST00000427417 PSMC6P62333 389 aa11.8□□□□□ -0.52
COMMD1-202ENST00000427417 GHRHRQ02643 423 aa11.8□□□□□ -0.52
COMMD1-202ENST00000427417 PPIGQ13427 754 aaKnown RBP eCLIP11.8□□□□□ -0.52
COMMD1-202ENST00000427417 FAM109BQ6ICB4 259 aaPredicted RBP11.8□□□□□ -0.52
COMMD1-202ENST00000427417 NFXL1Q6ZNB6 911 aa11.8□□□□□ -0.52
COMMD1-202ENST00000427417 TBC1D5Q92609 795 aa11.8□□□□□ -0.52
COMMD1-202ENST00000427417 MTG1Q9BT17 334 aaPredicted RBP11.8□□□□□ -0.52
COMMD1-202ENST00000427417 PPP1R12CQ9BZL4 782 aa11.8□□□□□ -0.52
COMMD1-202ENST00000427417 PXMP2Q9NR77 195 aa11.8□□□□□ -0.52
COMMD1-202ENST00000427417 MYH6P13533 1939 aa11.8□□□□□ -0.52
COMMD1-202ENST00000427417 CCDC69A6NI79 296 aa11.79□□□□□ -0.52
COMMD1-202ENST00000427417 A6NJR5 290 aa11.79□□□□□ -0.52
COMMD1-202ENST00000427417 GCOM1H8Y6P7 765 aaPredicted RBP11.79□□□□□ -0.52
COMMD1-202ENST00000427417 SLC27A2O14975 620 aa11.79□□□□□ -0.52
COMMD1-202ENST00000427417 MYL3P08590 195 aa11.79□□□□□ -0.52
COMMD1-202ENST00000427417 SUPT20HL2P0C7V6 817 aa11.79□□□□□ -0.52
COMMD1-202ENST00000427417 POLR2MP0CAP2 368 aa11.79□□□□□ -0.52
COMMD1-202ENST00000427417 EIF2AK2P19525 551 aaKnown RBP11.79□□□□□ -0.52
COMMD1-202ENST00000427417 SMARCA1P28370 1054 aa11.79□□□□□ -0.52
COMMD1-202ENST00000427417 LIFRP42702 1097 aa11.79□□□□□ -0.52
COMMD1-202ENST00000427417 GNAQP50148 359 aa11.79□□□□□ -0.52
COMMD1-202ENST00000427417 SMAD3P84022 425 aaKnown RBP11.79□□□□□ -0.52
COMMD1-202ENST00000427417 PURAQ00577 322 aaKnown RBP11.79□□□□□ -0.52
COMMD1-202ENST00000427417 NECTIN1Q15223 517 aa11.79□□□□□ -0.52
COMMD1-202ENST00000427417 CREB3L3Q68CJ9 461 aa11.79□□□□□ -0.52
COMMD1-202ENST00000427417 SEPT14Q6ZU15 432 aa11.79□□□□□ -0.52
COMMD1-202ENST00000427417 ZNF654Q8IZM8 581 aa11.79□□□□□ -0.52
COMMD1-202ENST00000427417 PPP1R13LQ8WUF5 828 aa11.79□□□□□ -0.52
COMMD1-202ENST00000427417 RNPC3Q96LT9 517 aaKnown RBP11.79□□□□□ -0.52
COMMD1-202ENST00000427417 GUCD1Q96NT3 240 aa11.79□□□□□ -0.52
COMMD1-202ENST00000427417 PIGSQ96S52 555 aa11.79□□□□□ -0.52
COMMD1-202ENST00000427417 LZTS2Q9BRK4 669 aa11.79□□□□□ -0.52
COMMD1-202ENST00000427417 LY9Q9HBG7 655 aa11.79□□□□□ -0.52
COMMD1-202ENST00000427417 SENP2Q9HC62 589 aa11.79□□□□□ -0.52
COMMD1-202ENST00000427417 COL20A1Q9P218 1284 aa11.79□□□□□ -0.52
COMMD1-202ENST00000427417 GRIN2DO15399 1336 aa11.79□□□□□ -0.52
COMMD1-202ENST00000427417 CYTH3O43739 400 aa11.78□□□□□ -0.52
COMMD1-202ENST00000427417 B4GALT4O60513 344 aa11.78□□□□□ -0.52
COMMD1-202ENST00000427417 PPP1R11O60927 126 aaPredicted RBP11.78□□□□□ -0.52
COMMD1-202ENST00000427417 CDC45O75419 566 aa11.78□□□□□ -0.52
COMMD1-202ENST00000427417 GH1P01241 217 aa11.78□□□□□ -0.52
COMMD1-202ENST00000427417 NR3C2P08235 984 aa11.78□□□□□ -0.52
COMMD1-202ENST00000427417 ZNF697Q5TEC3 545 aa11.78□□□□□ -0.52
COMMD1-202ENST00000427417 CCDC62Q6P9F0 684 aa11.78□□□□□ -0.52
COMMD1-202ENST00000427417 PSRC1Q6PGN9 363 aaPredicted RBP11.78□□□□□ -0.52
COMMD1-202ENST00000427417 KCNV1Q6PIU1 500 aa11.78□□□□□ -0.52
COMMD1-202ENST00000427417 COPS5Q92905 334 aa11.78□□□□□ -0.52
COMMD1-202ENST00000427417 RRP36Q96EU6 259 aaKnown RBP11.78□□□□□ -0.52
COMMD1-202ENST00000427417 CCDC136Q96JN2 1154 aa11.78□□□□□ -0.52
COMMD1-202ENST00000427417 SPZ1Q9BXG8 430 aa11.78□□□□□ -0.52
COMMD1-202ENST00000427417 HIPK3Q9H422 1215 aa11.78□□□□□ -0.52
COMMD1-202ENST00000427417 SEC63Q9UGP8 760 aaKnown RBP11.78□□□□□ -0.52
COMMD1-202ENST00000427417 MRVI1Q9Y6F6 885 aa11.78□□□□□ -0.52
COMMD1-202ENST00000427417 LAMA2P24043 3122 aaKnown RBP11.78□□□□□ -0.52
COMMD1-202ENST00000427417 UMODL1Q5DID0 1318 aa11.78□□□□□ -0.52
COMMD1-202ENST00000427417 SH2B2O14492 632 aaPredicted RBP11.77□□□□□ -0.53
COMMD1-202ENST00000427417 OPLAHO14841 1288 aa11.77□□□□□ -0.53
COMMD1-202ENST00000427417 ARIH2O95376 493 aa11.77□□□□□ -0.53
COMMD1-202ENST00000427417 ACRP10323 421 aa11.77□□□□□ -0.53
COMMD1-202ENST00000427417 CSF2RAP15509 400 aa11.77□□□□□ -0.53
COMMD1-202ENST00000427417 CYP2C18P33260 490 aa11.77□□□□□ -0.53
COMMD1-202ENST00000427417 PTPN11Q06124 597 aaPredicted RBP11.77□□□□□ -0.53
COMMD1-202ENST00000427417 LY6KQ17RY6 165 aa11.77□□□□□ -0.53
COMMD1-202ENST00000427417 NFRKBQ6P4R8 1299 aa11.77□□□□□ -0.53
COMMD1-202ENST00000427417 SYNE3Q6ZMZ3 975 aa11.77□□□□□ -0.53
COMMD1-202ENST00000427417 SLC17A8Q8NDX2 589 aa11.77□□□□□ -0.53
COMMD1-202ENST00000427417 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.77□□□□□ -0.53
COMMD1-202ENST00000427417 PDCD2LQ9BRP1 358 aa11.77□□□□□ -0.53
COMMD1-202ENST00000427417 TRPV6Q9H1D0 765 aa11.77□□□□□ -0.53
COMMD1-202ENST00000427417 ALDH8A1Q9H2A2 487 aaPredicted RBP11.77□□□□□ -0.53
COMMD1-202ENST00000427417 MTIF3Q9H2K0 278 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms